RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 GNAT2P19087 354 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 IGHMBP2P38935 993 aaKnown RBP14.26□□□□□ -0.13
PTCD2-204ENST00000486995 SYKP43405 635 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 CCZ1BP86790 482 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 CCZ1P86791 482 aaPredicted RBP14.26□□□□□ -0.13
PTCD2-204ENST00000486995 SSRP1Q08945 709 aaKnown RBP14.26□□□□□ -0.13
PTCD2-204ENST00000486995 ITPK1Q13572 414 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 GNL2Q13823 731 aaKnown RBP14.26□□□□□ -0.13
PTCD2-204ENST00000486995 NCAPHQ15003 741 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.26□□□□□ -0.13
PTCD2-204ENST00000486995 SLC4A4Q9Y6R1 1079 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 DOCK2Q92608 1830 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 DOT1LQ8TEK3 1739 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 LOC102724428A0A0B4J2F2 783 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 IFNAR1P17181 557 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 SIK1P57059 783 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 TRIM29Q14134 588 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 TPD52L1Q16890 204 aaPredicted RBP14.26□□□□□ -0.13
PTCD2-204ENST00000486995 JMYQ8N9B5 988 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 ACSBG1Q96GR2 724 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 TUBE1Q9UJT0 475 aa14.26□□□□□ -0.13
PTCD2-204ENST00000486995 COL16A1Q07092 1604 aaPredicted RBP14.25□□□□□ -0.13
PTCD2-204ENST00000486995 GUCY1A2P33402 732 aa14.25□□□□□ -0.13
PTCD2-204ENST00000486995 CHRNDQ07001 517 aa14.25□□□□□ -0.13
PTCD2-204ENST00000486995 RESP18Q5W5W9 173 aa14.25□□□□□ -0.13
PTCD2-204ENST00000486995 CLIC6Q96NY7 704 aa14.25□□□□□ -0.13
PTCD2-204ENST00000486995 NACAP1Q9BZK3 213 aa14.25□□□□□ -0.13
PTCD2-204ENST00000486995 OSBPL5Q9H0X9 879 aaPredicted RBP14.25□□□□□ -0.13
PTCD2-204ENST00000486995 NIP7Q9Y221 180 aaKnown RBP eCLIP14.25□□□□□ -0.13
PTCD2-204ENST00000486995 NID2Q14112 1375 aa14.25□□□□□ -0.13
PTCD2-204ENST00000486995 RTL9Q8NET4 1388 aa14.25□□□□□ -0.13
PTCD2-204ENST00000486995 USP27XA6NNY8 438 aa14.25□□□□□ -0.13
PTCD2-204ENST00000486995 TDO2P48775 406 aa14.25□□□□□ -0.13
PTCD2-204ENST00000486995 RRP12Q5JTH9 1297 aaKnown RBP14.25□□□□□ -0.13
PTCD2-204ENST00000486995 MIGA1Q8NAN2 632 aa14.25□□□□□ -0.13
PTCD2-204ENST00000486995 ZKSCAN3Q9BRR0 538 aa14.25□□□□□ -0.13
PTCD2-204ENST00000486995 A0A0G2JS52 829 aa14.24□□□□□ -0.13
PTCD2-204ENST00000486995 DDB1Q16531 1140 aa14.24□□□□□ -0.13
PTCD2-204ENST00000486995 ISM2Q6H9L7 571 aa14.24□□□□□ -0.13
PTCD2-204ENST00000486995 CDCA7Q9BWT1 371 aaPredicted RBP14.24□□□□□ -0.13
PTCD2-204ENST00000486995 XPO4Q9C0E2 1151 aaKnown RBP14.24□□□□□ -0.13
PTCD2-204ENST00000486995 TIAM2Q8IVF5 1701 aa14.24□□□□□ -0.13
PTCD2-204ENST00000486995 SMTNL1A8MU46 457 aa14.24□□□□□ -0.13
PTCD2-204ENST00000486995 MARCH10Q8NA82 808 aaPredicted RBP14.24□□□□□ -0.13
PTCD2-204ENST00000486995 IFNKQ9P0W0 207 aa14.24□□□□□ -0.13
PTCD2-204ENST00000486995 LRP2BPQ9P2M1 347 aa14.24□□□□□ -0.13
PTCD2-204ENST00000486995 IMPACTQ9P2X3 320 aa14.24□□□□□ -0.13
PTCD2-204ENST00000486995 SPATA31A1Q5TZJ5 1347 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 BTBD18B2RXH4 712 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 CUTAO60888 179 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 GSDMDP57764 484 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 WTAPQ15007 396 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 ADGRA1Q86SQ6 560 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 NOSTRINQ8IVI9 506 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 WASF1Q92558 559 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 HSD3B7Q9H2F3 369 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 PAXBP1Q9Y5B6 917 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 IKBKBO14920 756 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 MMP1P03956 469 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 TOB1P50616 345 aaPredicted RBP14.23□□□□□ -0.13
PTCD2-204ENST00000486995 RTN1Q16799 776 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 STK11IPQ8N1F8 1099 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 MTA3Q9BTC8 594 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 TOMM22Q9NS69 142 aa14.23□□□□□ -0.13
PTCD2-204ENST00000486995 ECM29Q5VYK3 1845 aa14.22□□□□□ -0.13
PTCD2-204ENST00000486995 BCL9LQ86UU0 1499 aa14.22□□□□□ -0.13
PTCD2-204ENST00000486995 SMC2O95347 1197 aa14.22□□□□□ -0.13
PTCD2-204ENST00000486995 PNOCQ13519 176 aa14.22□□□□□ -0.13
PTCD2-204ENST00000486995 SART3Q15020 963 aaKnown RBP14.22□□□□□ -0.13
PTCD2-204ENST00000486995 LONRF3Q496Y0 759 aa14.22□□□□□ -0.13
PTCD2-204ENST00000486995 NYAP1Q6ZVC0 841 aa14.22□□□□□ -0.13
PTCD2-204ENST00000486995 KCNJ14Q9UNX9 436 aa14.22□□□□□ -0.13
PTCD2-204ENST00000486995 IQSEC3Q9UPP2 1182 aaPredicted RBP14.22□□□□□ -0.13
PTCD2-204ENST00000486995 WNK3Q9BYP7 1800 aa14.22□□□□□ -0.13
PTCD2-204ENST00000486995 CYP7A1P22680 504 aa14.22□□□□□ -0.13
PTCD2-204ENST00000486995 PPARAQ07869 468 aa14.22□□□□□ -0.13
PTCD2-204ENST00000486995 METTL16Q86W50 562 aaKnown RBP14.22□□□□□ -0.13
PTCD2-204ENST00000486995 FOXP4Q8IVH2 680 aaPredicted RBP14.22□□□□□ -0.13
PTCD2-204ENST00000486995 CRACR2BQ8N4Y2 399 aaPredicted RBP14.22□□□□□ -0.13
PTCD2-204ENST00000486995 ANKRD7Q92527 254 aa14.22□□□□□ -0.13
PTCD2-204ENST00000486995 KCND1Q9NSA2 647 aa14.22□□□□□ -0.13
PTCD2-204ENST00000486995 KCNH3Q9ULD8 1083 aa14.22□□□□□ -0.13
PTCD2-204ENST00000486995 THRAP3Q9Y2W1 955 aaKnown RBP14.22□□□□□ -0.13
PTCD2-204ENST00000486995 COL4A1P02462 1669 aa14.21□□□□□ -0.13
PTCD2-204ENST00000486995 TPM4P67936 248 aa14.21□□□□□ -0.13
PTCD2-204ENST00000486995 CEP135Q66GS9 1140 aa14.21□□□□□ -0.13
PTCD2-204ENST00000486995 DIS3L2Q8IYB7 885 aaKnown RBP14.21□□□□□ -0.13
PTCD2-204ENST00000486995 CMTR1Q8N1G2 835 aaKnown RBP14.21□□□□□ -0.13
PTCD2-204ENST00000486995 TMTC2Q8N394 836 aa14.21□□□□□ -0.13
PTCD2-204ENST00000486995 CCDC82Q8N4S0 544 aa14.21□□□□□ -0.13
PTCD2-204ENST00000486995 ARID3AQ99856 593 aa14.21□□□□□ -0.13
PTCD2-204ENST00000486995 BCORQ6W2J9 1755 aa14.21□□□□□ -0.13
PTCD2-204ENST00000486995 ZNF804BA4D1E1 1349 aa14.21□□□□□ -0.13
PTCD2-204ENST00000486995 MYH14Q7Z406 1995 aaKnown RBP14.21□□□□□ -0.14
PTCD2-204ENST00000486995 COL22A1Q8NFW1 1626 aaPredicted RBP14.21□□□□□ -0.14
PTCD2-204ENST00000486995 WTIPA6NIX2 430 aaPredicted RBP14.21□□□□□ -0.14
PTCD2-204ENST00000486995 ARMCX5Q6P1M9 558 aa14.21□□□□□ -0.14
PTCD2-204ENST00000486995 KRBA2Q6ZNG9 492 aa14.21□□□□□ -0.14
PTCD2-204ENST00000486995 TRIM22Q8IYM9 498 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms