RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 SLC4A8Q2Y0W8 1093 aa25.77■■□□□ 1.72
LMBR1-217ENST00000485985 DZIP1Q86YF9 867 aaKnown RBP25.77■■□□□ 1.72
LMBR1-217ENST00000485985 BRCA2P51587 3418 aa25.76■■□□□ 1.71
LMBR1-217ENST00000485985 C17orf99Q6UX52 265 aa25.76■■□□□ 1.71
LMBR1-217ENST00000485985 ZFPM1Q8IX07 1006 aa25.76■■□□□ 1.71
LMBR1-217ENST00000485985 FTSJ3Q8IY81 847 aaKnown RBP25.76■■□□□ 1.71
LMBR1-217ENST00000485985 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.76■■□□□ 1.71
LMBR1-217ENST00000485985 SH3TC2Q8TF17 1288 aa25.76■■□□□ 1.71
LMBR1-217ENST00000485985 ZNF384Q8TF68 577 aa25.76■■□□□ 1.71
LMBR1-217ENST00000485985 HMG20BQ9P0W2 317 aa25.76■■□□□ 1.71
LMBR1-217ENST00000485985 ZNF112Q9UJU3 913 aa25.76■■□□□ 1.71
LMBR1-217ENST00000485985 ATRNL1Q5VV63 1379 aa25.76■■□□□ 1.71
LMBR1-217ENST00000485985 PHIPQ8WWQ0 1821 aa25.76■■□□□ 1.71
LMBR1-217ENST00000485985 MYCP01106 439 aaPredicted RBP25.75■■□□□ 1.71
LMBR1-217ENST00000485985 ARID4AP29374 1257 aaPredicted RBP25.75■■□□□ 1.71
LMBR1-217ENST00000485985 G3BP1Q13283 466 aaKnown RBP eCLIP25.75■■□□□ 1.71
LMBR1-217ENST00000485985 ITPRIPQ8IWB1 547 aa25.75■■□□□ 1.71
LMBR1-217ENST00000485985 SSH3Q8TE77 659 aa25.75■■□□□ 1.71
LMBR1-217ENST00000485985 FOCADQ5VW36 1801 aa25.74■■□□□ 1.71
LMBR1-217ENST00000485985 PRMT2P55345 433 aa25.74■■□□□ 1.71
LMBR1-217ENST00000485985 ANKRD23Q86SG2 305 aa25.74■■□□□ 1.71
LMBR1-217ENST00000485985 KCNH4Q9UQ05 1017 aa25.74■■□□□ 1.71
LMBR1-217ENST00000485985 MROH7-TTC4A0A0A0MT08 1334 aa25.73■■□□□ 1.71
LMBR1-217ENST00000485985 ATAD5Q96QE3 1844 aa25.73■■□□□ 1.71
LMBR1-217ENST00000485985 RGS3P49796 1198 aa25.73■■□□□ 1.71
LMBR1-217ENST00000485985 MECOMQ03112 1051 aa25.73■■□□□ 1.71
LMBR1-217ENST00000485985 SPATA5Q8NB90 893 aa25.73■■□□□ 1.71
LMBR1-217ENST00000485985 IDI2Q9BXS1 227 aa25.73■■□□□ 1.71
LMBR1-217ENST00000485985 CPA4Q9UI42 421 aa25.73■■□□□ 1.71
LMBR1-217ENST00000485985 PDHXO00330 501 aa25.72■■□□□ 1.71
LMBR1-217ENST00000485985 MCAMP43121 646 aa25.72■■□□□ 1.71
LMBR1-217ENST00000485985 BTDP43251 543 aa25.72■■□□□ 1.71
LMBR1-217ENST00000485985 ATP8B2P98198 1209 aa25.72■■□□□ 1.71
LMBR1-217ENST00000485985 SPTY2D1Q68D10 685 aaPredicted RBP25.72■■□□□ 1.71
LMBR1-217ENST00000485985 FAM163AQ96GL9 167 aaPredicted RBP25.72■■□□□ 1.71
LMBR1-217ENST00000485985 ZBTB7BO15156 539 aaPredicted RBP25.71■■□□□ 1.71
LMBR1-217ENST00000485985 ECM2O94769 699 aaPredicted RBP25.71■■□□□ 1.71
LMBR1-217ENST00000485985 CTGFP29279 349 aa25.71■■□□□ 1.71
LMBR1-217ENST00000485985 NOL9Q5SY16 702 aaKnown RBP25.71■■□□□ 1.71
LMBR1-217ENST00000485985 GORABQ5T7V8 394 aa25.71■■□□□ 1.71
LMBR1-217ENST00000485985 TBC1D9Q6ZT07 1266 aa25.71■■□□□ 1.71
LMBR1-217ENST00000485985 SH3BP5LQ7L8J4 393 aa25.71■■□□□ 1.71
LMBR1-217ENST00000485985 DDX4Q9NQI0 724 aaKnown RBP25.71■■□□□ 1.71
LMBR1-217ENST00000485985 SIPA1L1O43166 1804 aa25.71■■□□□ 1.71
LMBR1-217ENST00000485985 MOGSQ13724 837 aa25.7■■□□□ 1.7
LMBR1-217ENST00000485985 ERICH6Q7L0X2 663 aa25.7■■□□□ 1.7
LMBR1-217ENST00000485985 TRIM47Q96LD4 638 aa25.7■■□□□ 1.7
LMBR1-217ENST00000485985 ADGRA2Q96PE1 1338 aa25.69■■□□□ 1.7
LMBR1-217ENST00000485985 ENTPD3O75355 529 aa25.69■■□□□ 1.7
LMBR1-217ENST00000485985 PSMC4P43686 418 aa25.69■■□□□ 1.7
LMBR1-217ENST00000485985 TNNI3KQ59H18 835 aa25.69■■□□□ 1.7
LMBR1-217ENST00000485985 SLF2Q8IX21 1173 aa25.69■■□□□ 1.7
LMBR1-217ENST00000485985 SRRDQ9UH36 339 aa25.69■■□□□ 1.7
LMBR1-217ENST00000485985 FPGT-TNNI3KV9GXZ4 949 aa25.69■■□□□ 1.7
LMBR1-217ENST00000485985 RHBDL3P58872 404 aa25.68■■□□□ 1.7
LMBR1-217ENST00000485985 NSUN4Q96CB9 384 aaKnown RBP25.68■■□□□ 1.7
LMBR1-217ENST00000485985 GPR108Q9NPR9 543 aa25.68■■□□□ 1.7
LMBR1-217ENST00000485985 CEP290O15078 2479 aa25.68■■□□□ 1.7
LMBR1-217ENST00000485985 GPR75-ASB3A0A0A6YYF3 556 aa25.67■■□□□ 1.7
LMBR1-217ENST00000485985 DDTLA6NHG4 134 aaPredicted RBP25.67■■□□□ 1.7
LMBR1-217ENST00000485985 SURF6O75683 361 aaKnown RBP25.67■■□□□ 1.7
LMBR1-217ENST00000485985 SLURP2P0DP57 97 aa25.67■■□□□ 1.7
LMBR1-217ENST00000485985 OS9Q13438 667 aaPredicted RBP25.67■■□□□ 1.7
LMBR1-217ENST00000485985 PICALMQ13492 652 aa25.67■■□□□ 1.7
LMBR1-217ENST00000485985 PANK1Q8TE04 598 aa25.67■■□□□ 1.7
LMBR1-217ENST00000485985 DBNDD2Q9BQY9 259 aa25.67■■□□□ 1.7
LMBR1-217ENST00000485985 CXCL11O14625 94 aa25.66■■□□□ 1.7
LMBR1-217ENST00000485985 FMNL1O95466 1100 aaPredicted RBP25.66■■□□□ 1.7
LMBR1-217ENST00000485985 OSBPP22059 807 aa25.66■■□□□ 1.7
LMBR1-217ENST00000485985 HOXD10P28358 340 aa25.66■■□□□ 1.7
LMBR1-217ENST00000485985 MTFR1Q15390 333 aa25.66■■□□□ 1.7
LMBR1-217ENST00000485985 NOP58Q9Y2X3 529 aaKnown RBP25.66■■□□□ 1.7
LMBR1-217ENST00000485985 PHF20L1A8MW92 1017 aa25.65■■□□□ 1.7
LMBR1-217ENST00000485985 UQCRFS1P1P0C7P4 283 aa25.65■■□□□ 1.7
LMBR1-217ENST00000485985 CEP85Q6P2H3 762 aa25.65■■□□□ 1.7
LMBR1-217ENST00000485985 RAI14Q9P0K7 980 aa25.65■■□□□ 1.7
LMBR1-217ENST00000485985 GPAT2Q6NUI2 795 aa25.64■■□□□ 1.7
LMBR1-217ENST00000485985 ZSCAN29Q8IWY8 852 aaPredicted RBP25.64■■□□□ 1.7
LMBR1-217ENST00000485985 RAET1EQ8TD07 263 aa25.64■■□□□ 1.7
LMBR1-217ENST00000485985 PARK7Q99497 189 aaKnown RBP25.64■■□□□ 1.7
LMBR1-217ENST00000485985 SNRKQ9NRH2 765 aa25.64■■□□□ 1.7
LMBR1-217ENST00000485985 TLR7Q9NYK1 1049 aaKnown RBP25.64■■□□□ 1.7
LMBR1-217ENST00000485985 COLQQ9Y215 455 aaPredicted RBP25.64■■□□□ 1.7
LMBR1-217ENST00000485985 MGAMO43451 1857 aa25.64■■□□□ 1.69
LMBR1-217ENST00000485985 GRK4P32298 578 aa25.63■■□□□ 1.69
LMBR1-217ENST00000485985 FXR1P51114 621 aaKnown RBP eCLIP25.63■■□□□ 1.69
LMBR1-217ENST00000485985 TTC39AQ5SRH9 613 aa25.63■■□□□ 1.69
LMBR1-217ENST00000485985 COL2A1P02458 1487 aaPredicted RBP25.63■■□□□ 1.69
LMBR1-217ENST00000485985 MYPNQ86TC9 1320 aa25.63■■□□□ 1.69
LMBR1-217ENST00000485985 CYP2C8P10632 490 aa25.62■■□□□ 1.69
LMBR1-217ENST00000485985 BCRP11274 1271 aa25.62■■□□□ 1.69
LMBR1-217ENST00000485985 GSTO1P78417 241 aa25.62■■□□□ 1.69
LMBR1-217ENST00000485985 MAP3K10Q02779 954 aa25.62■■□□□ 1.69
LMBR1-217ENST00000485985 SCYL3Q8IZE3 742 aa25.62■■□□□ 1.69
LMBR1-217ENST00000485985 SHISA4Q96DD7 197 aa25.62■■□□□ 1.69
LMBR1-217ENST00000485985 DBNLQ9UJU6 430 aaKnown RBP25.62■■□□□ 1.69
LMBR1-217ENST00000485985 ZHX2Q9Y6X8 837 aa25.62■■□□□ 1.69
LMBR1-217ENST00000485985 H0YGN5 161 aa25.61■■□□□ 1.69
LMBR1-217ENST00000485985 PICK1Q9NRD5 415 aa25.61■■□□□ 1.69
LMBR1-217ENST00000485985 LRP2BPQ9P2M1 347 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms