RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
HDAC6-227ENST00000485102 CCDC102BQ68D86 513 aa16.19■□□□□ 0.18
HDAC6-227ENST00000485102 SLF2Q8IX21 1173 aa16.19■□□□□ 0.18
HDAC6-227ENST00000485102 SIL1Q9H173 461 aa16.19■□□□□ 0.18
HDAC6-227ENST00000485102 SMC4Q9NTJ3 1288 aa16.19■□□□□ 0.18
HDAC6-227ENST00000485102 AFG3L2Q9Y4W6 797 aa16.19■□□□□ 0.18
HDAC6-227ENST00000485102 RANBP2P49792 3224 aaKnown RBP16.19■□□□□ 0.18
HDAC6-227ENST00000485102 MYPNQ86TC9 1320 aa16.19■□□□□ 0.18
HDAC6-227ENST00000485102 CTNND1O60716 968 aaKnown RBP16.18■□□□□ 0.18
HDAC6-227ENST00000485102 MYCP01106 439 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-227ENST00000485102 PTPRAP18433 802 aa16.18■□□□□ 0.18
HDAC6-227ENST00000485102 RGS3P49796 1198 aa16.18■□□□□ 0.18
HDAC6-227ENST00000485102 FCGRTP55899 365 aa16.18■□□□□ 0.18
HDAC6-227ENST00000485102 SH3BP5LQ7L8J4 393 aa16.18■□□□□ 0.18
HDAC6-227ENST00000485102 ZHX2Q9Y6X8 837 aa16.18■□□□□ 0.18
HDAC6-227ENST00000485102 SZT2Q5T011 3432 aa16.17■□□□□ 0.18
HDAC6-227ENST00000485102 MGAMO43451 1857 aa16.17■□□□□ 0.18
HDAC6-227ENST00000485102 TBC1D12O60347 775 aa16.17■□□□□ 0.18
HDAC6-227ENST00000485102 UBXN2AP68543 259 aa16.17■□□□□ 0.18
HDAC6-227ENST00000485102 SPTY2D1Q68D10 685 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-227ENST00000485102 SLAIN1Q8ND83 568 aa16.17■□□□□ 0.18
HDAC6-227ENST00000485102 API5Q9BZZ5 524 aaKnown RBP16.17■□□□□ 0.18
HDAC6-227ENST00000485102 PICK1Q9NRD5 415 aa16.17■□□□□ 0.18
HDAC6-227ENST00000485102 PTPRFP10586 1907 aa16.16■□□□□ 0.18
HDAC6-227ENST00000485102 MAP4K4O95819 1239 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-227ENST00000485102 CYP2C8P10632 490 aa16.16■□□□□ 0.18
HDAC6-227ENST00000485102 CCL5P13501 91 aa16.16■□□□□ 0.18
HDAC6-227ENST00000485102 PRKCZQ05513 592 aa16.16■□□□□ 0.18
HDAC6-227ENST00000485102 RASGRF1Q13972 1273 aa16.16■□□□□ 0.18
HDAC6-227ENST00000485102 PXYLP1Q8TE99 480 aa16.16■□□□□ 0.18
HDAC6-227ENST00000485102 CDCA7LQ96GN5 454 aa16.16■□□□□ 0.18
HDAC6-227ENST00000485102 NOB1Q9ULX3 412 aaKnown RBP16.16■□□□□ 0.18
HDAC6-227ENST00000485102 PA2G4Q9UQ80 394 aaKnown RBP16.16■□□□□ 0.18
HDAC6-227ENST00000485102 LRRFIP2Q9Y608 721 aaKnown RBP16.16■□□□□ 0.18
HDAC6-227ENST00000485102 DOCK2Q92608 1830 aa16.16■□□□□ 0.18
HDAC6-227ENST00000485102 DOCK3Q8IZD9 2030 aa16.16■□□□□ 0.18
HDAC6-227ENST00000485102 GPR75-ASB3A0A0A6YYF3 556 aa16.15■□□□□ 0.18
HDAC6-227ENST00000485102 DDTLA6NHG4 134 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-227ENST00000485102 ADORA1P30542 326 aa16.15■□□□□ 0.18
HDAC6-227ENST00000485102 MTX1Q13505 466 aa16.15■□□□□ 0.18
HDAC6-227ENST00000485102 IRF5Q13568 498 aa16.15■□□□□ 0.18
HDAC6-227ENST00000485102 ARHGAP45Q92619 1136 aa16.15■□□□□ 0.18
HDAC6-227ENST00000485102 HTATIP2Q9BUP3 242 aa16.15■□□□□ 0.18
HDAC6-227ENST00000485102 RNF208Q9H0X6 261 aa16.15■□□□□ 0.18
HDAC6-227ENST00000485102 AKAP2Q9Y2D5 859 aa16.15■□□□□ 0.18
HDAC6-227ENST00000485102 SGPL1O95470 568 aa16.14■□□□□ 0.17
HDAC6-227ENST00000485102 RHBDL3P58872 404 aa16.14■□□□□ 0.17
HDAC6-227ENST00000485102 TIMM10P62072 90 aa16.14■□□□□ 0.17
HDAC6-227ENST00000485102 DZIP1Q86YF9 867 aaKnown RBP16.14■□□□□ 0.17
HDAC6-227ENST00000485102 U2AF1L4Q8WU68 220 aaKnown RBP16.14■□□□□ 0.17
HDAC6-227ENST00000485102 PRO3102Q9H379 93 aa16.14■□□□□ 0.17
HDAC6-227ENST00000485102 DDX4Q9NQI0 724 aaKnown RBP16.14■□□□□ 0.17
HDAC6-227ENST00000485102 PHIPQ8WWQ0 1821 aa16.14■□□□□ 0.17
HDAC6-227ENST00000485102 FLT3LGP49771 235 aa16.13■□□□□ 0.17
HDAC6-227ENST00000485102 MVPQ14764 893 aaKnown RBP16.13■□□□□ 0.17
HDAC6-227ENST00000485102 ZSCAN29Q8IWY8 852 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-227ENST00000485102 DPF3Q92784 378 aa16.13■□□□□ 0.17
HDAC6-227ENST00000485102 XAGE2Q96GT9 111 aa16.13■□□□□ 0.17
HDAC6-227ENST00000485102 MEIS3Q99687 375 aa16.13■□□□□ 0.17
HDAC6-227ENST00000485102 TBC1D2Q9BYX2 928 aa16.13■□□□□ 0.17
HDAC6-227ENST00000485102 BIN2Q9UBW5 565 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-227ENST00000485102 ABCF2Q9UG63 623 aa16.13■□□□□ 0.17
HDAC6-227ENST00000485102 GABRQQ9UN88 632 aa16.13■□□□□ 0.17
HDAC6-227ENST00000485102 MROH7-TTC4A0A0A0MT08 1334 aa16.13■□□□□ 0.17
HDAC6-227ENST00000485102 COL2A1P02458 1487 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-227ENST00000485102 A0A1B0GUL7 405 aa16.12■□□□□ 0.17
HDAC6-227ENST00000485102 ADCY3O60266 1144 aa16.12■□□□□ 0.17
HDAC6-227ENST00000485102 ECM2O94769 699 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-227ENST00000485102 GNAI3P08754 354 aa16.12■□□□□ 0.17
HDAC6-227ENST00000485102 BTDP43251 543 aa16.12■□□□□ 0.17
HDAC6-227ENST00000485102 DIEXFQ68CQ4 756 aaKnown RBP16.12■□□□□ 0.17
HDAC6-227ENST00000485102 ERICH6Q7L0X2 663 aa16.12■□□□□ 0.17
HDAC6-227ENST00000485102 ZNF384Q8TF68 577 aa16.12■□□□□ 0.17
HDAC6-227ENST00000485102 AGTPBP1Q9UPW5 1226 aa16.12■□□□□ 0.17
HDAC6-227ENST00000485102 NR2E3Q9Y5X4 410 aa16.12■□□□□ 0.17
HDAC6-227ENST00000485102 DOCK1Q14185 1865 aa16.12■□□□□ 0.17
HDAC6-227ENST00000485102 LDHCP07864 332 aa16.11■□□□□ 0.17
HDAC6-227ENST00000485102 MECOMQ03112 1051 aa16.11■□□□□ 0.17
HDAC6-227ENST00000485102 CHRDL2Q6WN34 429 aa16.11■□□□□ 0.17
HDAC6-227ENST00000485102 GADL1Q6ZQY3 521 aa16.11■□□□□ 0.17
HDAC6-227ENST00000485102 PROCA1Q8NCQ7 364 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-227ENST00000485102 OSBPL5Q9H0X9 879 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-227ENST00000485102 UNC93B1Q9H1C4 597 aa16.11■□□□□ 0.17
HDAC6-227ENST00000485102 TNPO2O14787 897 aaKnown RBP16.1■□□□□ 0.17
HDAC6-227ENST00000485102 SRGAP3O43295 1099 aa16.1■□□□□ 0.17
HDAC6-227ENST00000485102 TFCP2Q12800 502 aa16.1■□□□□ 0.17
HDAC6-227ENST00000485102 FAM110CQ1W6H9 321 aa16.1■□□□□ 0.17
HDAC6-227ENST00000485102 SMCR8Q8TEV9 937 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-227ENST00000485102 NSUN4Q96CB9 384 aaKnown RBP16.1■□□□□ 0.17
HDAC6-227ENST00000485102 PAK6Q9NQU5 681 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-227ENST00000485102 RBM27Q9P2N5 1060 aaKnown RBP16.1■□□□□ 0.17
HDAC6-227ENST00000485102 PNMA3Q9UL41 463 aa16.1■□□□□ 0.17
HDAC6-227ENST00000485102 A0A1W2PPC1 479 aa16.09■□□□□ 0.17
HDAC6-227ENST00000485102 TRIM75PA6NK02 468 aa16.09■□□□□ 0.17
HDAC6-227ENST00000485102 FARP2O94887 1054 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-227ENST00000485102 GCLCP48506 637 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-227ENST00000485102 RARSP54136 660 aaKnown RBP16.09■□□□□ 0.17
HDAC6-227ENST00000485102 GSTO1P78417 241 aa16.09■□□□□ 0.17
HDAC6-227ENST00000485102 COA7Q96BR5 231 aa16.09■□□□□ 0.17
HDAC6-227ENST00000485102 CRISPLD2Q9H0B8 497 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms