RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 GJA8P48165 433 aa12.33□□□□□ -0.44
CPSF4-213ENST00000484112 FCGRTP55899 365 aa12.33□□□□□ -0.44
CPSF4-213ENST00000484112 ATP8B2P98198 1209 aa12.33□□□□□ -0.44
CPSF4-213ENST00000484112 PRKCZQ05513 592 aa12.33□□□□□ -0.44
CPSF4-213ENST00000484112 ATG9AQ7Z3C6 839 aa12.33□□□□□ -0.44
CPSF4-213ENST00000484112 PANK1Q8TE04 598 aa12.33□□□□□ -0.44
CPSF4-213ENST00000484112 SSH3Q8TE77 659 aa12.33□□□□□ -0.44
CPSF4-213ENST00000484112 LPIN2Q92539 896 aa12.33□□□□□ -0.44
CPSF4-213ENST00000484112 YTHDC1Q96MU7 727 aaKnown RBP12.33□□□□□ -0.44
CPSF4-213ENST00000484112 PARK7Q99497 189 aaKnown RBP12.33□□□□□ -0.44
CPSF4-213ENST00000484112 HTATIP2Q9BUP3 242 aa12.33□□□□□ -0.44
CPSF4-213ENST00000484112 CEP126Q9P2H0 1117 aa12.33□□□□□ -0.44
CPSF4-213ENST00000484112 ZNF112Q9UJU3 913 aa12.33□□□□□ -0.44
CPSF4-213ENST00000484112 HTTP42858 3142 aa12.32□□□□□ -0.44
CPSF4-213ENST00000484112 LDHBP07195 334 aaKnown RBP12.32□□□□□ -0.44
CPSF4-213ENST00000484112 MOGSQ13724 837 aa12.32□□□□□ -0.44
CPSF4-213ENST00000484112 POLA2Q14181 598 aa12.32□□□□□ -0.44
CPSF4-213ENST00000484112 NOL9Q5SY16 702 aaKnown RBP12.32□□□□□ -0.44
CPSF4-213ENST00000484112 GADL1Q6ZQY3 521 aa12.32□□□□□ -0.44
CPSF4-213ENST00000484112 ZFPM1Q8IX07 1006 aa12.32□□□□□ -0.44
CPSF4-213ENST00000484112 RPAP2Q8IXW5 612 aaPredicted RBP12.32□□□□□ -0.44
CPSF4-213ENST00000484112 SIL1Q9H173 461 aa12.32□□□□□ -0.44
CPSF4-213ENST00000484112 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
CPSF4-213ENST00000484112 GABRQQ9UN88 632 aa12.32□□□□□ -0.44
CPSF4-213ENST00000484112 AKAP2Q9Y2D5 859 aa12.32□□□□□ -0.44
CPSF4-213ENST00000484112 ZHX2Q9Y6X8 837 aa12.32□□□□□ -0.44
CPSF4-213ENST00000484112 ADGRA2Q96PE1 1338 aa12.32□□□□□ -0.44
CPSF4-213ENST00000484112 MKI67P46013 3256 aaKnown RBP12.31□□□□□ -0.44
CPSF4-213ENST00000484112 CXCL11O14625 94 aa12.31□□□□□ -0.44
CPSF4-213ENST00000484112 GPAT2Q6NUI2 795 aa12.31□□□□□ -0.44
CPSF4-213ENST00000484112 ZSCAN29Q8IWY8 852 aaPredicted RBP12.31□□□□□ -0.44
CPSF4-213ENST00000484112 U2AF1L4Q8WU68 220 aaKnown RBP12.31□□□□□ -0.44
CPSF4-213ENST00000484112 UNC93B1Q9H1C4 597 aa12.31□□□□□ -0.44
CPSF4-213ENST00000484112 PICK1Q9NRD5 415 aa12.31□□□□□ -0.44
CPSF4-213ENST00000484112 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
CPSF4-213ENST00000484112 GNL3LQ9NVN8 582 aaKnown RBP12.31□□□□□ -0.44
CPSF4-213ENST00000484112 TAOK2Q9UL54 1235 aa12.31□□□□□ -0.44
CPSF4-213ENST00000484112 AK9Q5TCS8 1911 aa12.31□□□□□ -0.44
CPSF4-213ENST00000484112 ADCY3O60266 1144 aa12.3□□□□□ -0.44
CPSF4-213ENST00000484112 FARP2O94887 1054 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-213ENST00000484112 BCRP11274 1271 aa12.3□□□□□ -0.44
CPSF4-213ENST00000484112 G3BP1Q13283 466 aaKnown RBP eCLIP12.3□□□□□ -0.44
CPSF4-213ENST00000484112 ATP2B3Q16720 1220 aa12.3□□□□□ -0.44
CPSF4-213ENST00000484112 FASTKD5Q7L8L6 764 aaKnown RBP12.3□□□□□ -0.44
CPSF4-213ENST00000484112 SLAIN1Q8ND83 568 aa12.3□□□□□ -0.44
CPSF4-213ENST00000484112 COG6Q9Y2V7 657 aa12.3□□□□□ -0.44
CPSF4-213ENST00000484112 NOP58Q9Y2X3 529 aaKnown RBP12.3□□□□□ -0.44
CPSF4-213ENST00000484112 NR2E3Q9Y5X4 410 aa12.3□□□□□ -0.44
CPSF4-213ENST00000484112 CENPFP49454 3210 aa12.3□□□□□ -0.44
CPSF4-213ENST00000484112 PNMA6EA0A0J9YXQ4 647 aa12.29□□□□□ -0.44
CPSF4-213ENST00000484112 SEMA3EO15041 775 aa12.29□□□□□ -0.44
CPSF4-213ENST00000484112 HMMRO75330 724 aa12.29□□□□□ -0.44
CPSF4-213ENST00000484112 SGPL1O95470 568 aa12.29□□□□□ -0.44
CPSF4-213ENST00000484112 TFRCP02786 760 aaKnown RBP12.29□□□□□ -0.44
CPSF4-213ENST00000484112 SLURP2P0DP57 97 aa12.29□□□□□ -0.44
CPSF4-213ENST00000484112 ELNP15502 786 aa12.29□□□□□ -0.44
CPSF4-213ENST00000484112 PTPRAP18433 802 aa12.29□□□□□ -0.44
CPSF4-213ENST00000484112 FLT3LGP49771 235 aa12.29□□□□□ -0.44
CPSF4-213ENST00000484112 RGS3P49796 1198 aa12.29□□□□□ -0.44
CPSF4-213ENST00000484112 HSP90AB4PQ58FF6 505 aa12.29□□□□□ -0.44
CPSF4-213ENST00000484112 CEP85Q6P2H3 762 aa12.29□□□□□ -0.44
CPSF4-213ENST00000484112 SCYL3Q8IZE3 742 aa12.29□□□□□ -0.44
CPSF4-213ENST00000484112 SMCR8Q8TEV9 937 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-213ENST00000484112 GPR108Q9NPR9 543 aa12.29□□□□□ -0.44
CPSF4-213ENST00000484112 DENND2AQ9ULE3 1009 aa12.29□□□□□ -0.44
CPSF4-213ENST00000484112 BRCA2P51587 3418 aa12.28□□□□□ -0.44
CPSF4-213ENST00000484112 A0A0G2JLL6 359 aaPredicted RBP12.28□□□□□ -0.44
CPSF4-213ENST00000484112 PHF20L1A8MW92 1017 aa12.28□□□□□ -0.44
CPSF4-213ENST00000484112 TNPO2O14787 897 aaKnown RBP12.28□□□□□ -0.44
CPSF4-213ENST00000484112 PHKA1P46020 1223 aa12.28□□□□□ -0.44
CPSF4-213ENST00000484112 RRP1P56182 461 aaKnown RBP12.28□□□□□ -0.44
CPSF4-213ENST00000484112 PICALMQ13492 652 aa12.28□□□□□ -0.44
CPSF4-213ENST00000484112 AAMPQ13685 434 aa12.28□□□□□ -0.44
CPSF4-213ENST00000484112 PRRT2Q7Z6L0 340 aaPredicted RBP12.28□□□□□ -0.44
CPSF4-213ENST00000484112 UBE2Q1Q7Z7E8 422 aa12.28□□□□□ -0.44
CPSF4-213ENST00000484112 ERC1Q8IUD2 1116 aa12.28□□□□□ -0.44
CPSF4-213ENST00000484112 ABCF2Q9UG63 623 aa12.28□□□□□ -0.44
CPSF4-213ENST00000484112 PA2G4Q9UQ80 394 aaKnown RBP12.28□□□□□ -0.44
CPSF4-213ENST00000484112 TRIM75PA6NK02 468 aa12.27□□□□□ -0.45
CPSF4-213ENST00000484112 EVI5O60447 810 aa12.27□□□□□ -0.45
CPSF4-213ENST00000484112 INHAP05111 366 aa12.27□□□□□ -0.45
CPSF4-213ENST00000484112 SH3BP5LQ7L8J4 393 aa12.27□□□□□ -0.45
CPSF4-213ENST00000484112 CCDC84Q86UT8 332 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-213ENST00000484112 DZIP1Q86YF9 867 aaKnown RBP12.27□□□□□ -0.45
CPSF4-213ENST00000484112 DEFB118Q96PH6 123 aa12.27□□□□□ -0.45
CPSF4-213ENST00000484112 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.27□□□□□ -0.45
CPSF4-213ENST00000484112 AFG3L2Q9Y4W6 797 aa12.27□□□□□ -0.45
CPSF4-213ENST00000484112 PDS5AQ29RF7 1337 aaKnown RBP12.27□□□□□ -0.45
CPSF4-213ENST00000484112 DDTLA6NHG4 134 aaPredicted RBP12.26□□□□□ -0.45
CPSF4-213ENST00000484112 ENTPD3O75355 529 aa12.26□□□□□ -0.45
CPSF4-213ENST00000484112 SURF6O75683 361 aaKnown RBP12.26□□□□□ -0.45
CPSF4-213ENST00000484112 ADORA1P30542 326 aa12.26□□□□□ -0.45
CPSF4-213ENST00000484112 ZGPATQ8N5A5 531 aaKnown RBP12.26□□□□□ -0.45
CPSF4-213ENST00000484112 ANKRD13CQ8N6S4 541 aa12.26□□□□□ -0.45
CPSF4-213ENST00000484112 IDI2Q9BXS1 227 aa12.26□□□□□ -0.45
CPSF4-213ENST00000484112 C1orf115Q9H7X2 142 aa12.26□□□□□ -0.45
CPSF4-213ENST00000484112 SALL1Q9NSC2 1324 aa12.26□□□□□ -0.45
CPSF4-213ENST00000484112 A0A1B0GUL7 405 aa12.25□□□□□ -0.45
CPSF4-213ENST00000484112 CTNND1O60716 968 aaKnown RBP12.25□□□□□ -0.45
CPSF4-213ENST00000484112 IGSF3O75054 1194 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms