RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 TCP10L2B9ZVM9 353 aa8.4□□□□□ -1.06
BRCA1-216ENST00000484087 MX1P20591 662 aa8.4□□□□□ -1.06
BRCA1-216ENST00000484087 POTEBQ6S5H4 581 aa8.4□□□□□ -1.06
BRCA1-216ENST00000484087 TBC1D32Q96NH3 1257 aa8.4□□□□□ -1.06
BRCA1-216ENST00000484087 DBNDD2Q9BQY9 259 aa8.4□□□□□ -1.06
BRCA1-216ENST00000484087 C22orf23Q9BZE7 217 aa8.4□□□□□ -1.06
BRCA1-216ENST00000484087 SNRKQ9NRH2 765 aa8.4□□□□□ -1.06
BRCA1-216ENST00000484087 CDK5RAP2Q96SN8 1893 aa8.4□□□□□ -1.06
BRCA1-216ENST00000484087 DOCK2Q92608 1830 aa8.39□□□□□ -1.07
BRCA1-216ENST00000484087 UBE2Q2LH0YL09 131 aa8.39□□□□□ -1.07
BRCA1-216ENST00000484087 FOXN1O15353 648 aa8.39□□□□□ -1.07
BRCA1-216ENST00000484087 SLURP2P0DP57 97 aa8.39□□□□□ -1.07
BRCA1-216ENST00000484087 PSEN1P49768 467 aa8.39□□□□□ -1.07
BRCA1-216ENST00000484087 PDE1AP54750 535 aa8.39□□□□□ -1.07
BRCA1-216ENST00000484087 G3BP1Q13283 466 aaKnown RBP eCLIP8.39□□□□□ -1.07
BRCA1-216ENST00000484087 TTLL12Q14166 644 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-216ENST00000484087 TBC1D9Q6ZT07 1266 aa8.39□□□□□ -1.07
BRCA1-216ENST00000484087 GPATCH3Q96I76 525 aa8.39□□□□□ -1.07
BRCA1-216ENST00000484087 TMEM39BQ9GZU3 492 aa8.39□□□□□ -1.07
BRCA1-216ENST00000484087 CCDC8Q9H0W5 538 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-216ENST00000484087 IL1RAPL2Q9NP60 686 aa8.39□□□□□ -1.07
BRCA1-216ENST00000484087 ZNF70Q9UC06 446 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-216ENST00000484087 PITPNM2Q9BZ72 1349 aa8.39□□□□□ -1.07
BRCA1-216ENST00000484087 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-216ENST00000484087 MCAMP43121 646 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 FKBP1AP62942 108 aaKnown RBP8.38□□□□□ -1.07
BRCA1-216ENST00000484087 TNNI3KQ59H18 835 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 NBPF12Q5TAG4 269 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-216ENST00000484087 COL13A1Q5TAT6 717 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-216ENST00000484087 CLASRPQ8N2M8 674 aaKnown RBP8.38□□□□□ -1.07
BRCA1-216ENST00000484087 RHPN1Q8TCX5 695 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 ZNF384Q8TF68 577 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 ZFP91Q96JP5 570 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-216ENST00000484087 DEFB129Q9H1M3 183 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 HMG20BQ9P0W2 317 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 ABCF2Q9UG63 623 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 FPGT-TNNI3KV9GXZ4 949 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 FAM205CA6NFA0 338 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 FAM155AB1AL88 458 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-216ENST00000484087 GSPT1P15170 499 aaKnown RBP8.38□□□□□ -1.07
BRCA1-216ENST00000484087 ZNF157P51786 506 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-216ENST00000484087 NFIAQ12857 509 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 RASA3Q14644 834 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 RASAL3Q86YV0 1011 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 APOBEC3FQ8IUX4 373 aaKnown RBP8.38□□□□□ -1.07
BRCA1-216ENST00000484087 C2orf69Q8N8R5 385 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 MTMR14Q8NCE2 650 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 EAF2Q96CJ1 260 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-216ENST00000484087 CLMNQ96JQ2 1002 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 STAP2Q9UGK3 403 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 DBNLQ9UJU6 430 aaKnown RBP8.38□□□□□ -1.07
BRCA1-216ENST00000484087 SERPINA10Q9UK55 444 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 DAGLAQ9Y4D2 1042 aa8.38□□□□□ -1.07
BRCA1-216ENST00000484087 CASP8AP2Q9UKL3 1982 aa8.37□□□□□ -1.07
BRCA1-216ENST00000484087 TRIM6-TRIM34B2RNG4 842 aa8.37□□□□□ -1.07
BRCA1-216ENST00000484087 ERC2O15083 957 aa8.37□□□□□ -1.07
BRCA1-216ENST00000484087 REC8O95072 547 aa8.37□□□□□ -1.07
BRCA1-216ENST00000484087 IFIT2P09913 472 aaKnown RBP8.37□□□□□ -1.07
BRCA1-216ENST00000484087 SDSP20132 328 aa8.37□□□□□ -1.07
BRCA1-216ENST00000484087 TCP10Q12799 353 aa8.37□□□□□ -1.07
BRCA1-216ENST00000484087 GORABQ5T7V8 394 aa8.37□□□□□ -1.07
BRCA1-216ENST00000484087 APOBEC3HQ6NTF7 200 aaKnown RBP8.37□□□□□ -1.07
BRCA1-216ENST00000484087 RGMBQ6NW40 437 aa8.37□□□□□ -1.07
BRCA1-216ENST00000484087 OTUD7AQ8TE49 926 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-216ENST00000484087 TBC1D22AQ8WUA7 517 aa8.37□□□□□ -1.07
BRCA1-216ENST00000484087 TEKT1Q969V4 418 aa8.37□□□□□ -1.07
BRCA1-216ENST00000484087 ANGEL1Q9UNK9 670 aaKnown RBP8.37□□□□□ -1.07
BRCA1-216ENST00000484087 SIPA1L1O43166 1804 aa8.36□□□□□ -1.07
BRCA1-216ENST00000484087 TTC41PQ6P2S7 1318 aa8.36□□□□□ -1.07
BRCA1-216ENST00000484087 TULP1O00294 542 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-216ENST00000484087 MYO1BO43795 1136 aa8.36□□□□□ -1.07
BRCA1-216ENST00000484087 LDHBP07195 334 aaKnown RBP8.36□□□□□ -1.07
BRCA1-216ENST00000484087 SLC10A3P09131 477 aa8.36□□□□□ -1.07
BRCA1-216ENST00000484087 ARID4AP29374 1257 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-216ENST00000484087 PDAP1Q13442 181 aaKnown RBP8.36□□□□□ -1.07
BRCA1-216ENST00000484087 TTC39AQ5SRH9 613 aa8.36□□□□□ -1.07
BRCA1-216ENST00000484087 AACSQ86V21 672 aa8.36□□□□□ -1.07
BRCA1-216ENST00000484087 ZFPM1Q8IX07 1006 aa8.36□□□□□ -1.07
BRCA1-216ENST00000484087 SPATA5Q8NB90 893 aa8.36□□□□□ -1.07
BRCA1-216ENST00000484087 WDR66Q8TBY9 1149 aa8.36□□□□□ -1.07
BRCA1-216ENST00000484087 RILPL2Q969X0 211 aa8.36□□□□□ -1.07
BRCA1-216ENST00000484087 TEPSINQ96N21 525 aa8.36□□□□□ -1.07
BRCA1-216ENST00000484087 DENND2AQ9ULE3 1009 aa8.36□□□□□ -1.07
BRCA1-216ENST00000484087 AKAP2Q9Y2D5 859 aa8.36□□□□□ -1.07
BRCA1-216ENST00000484087 FOCADQ5VW36 1801 aa8.36□□□□□ -1.07
BRCA1-216ENST00000484087 LAMB1P07942 1786 aa8.35□□□□□ -1.07
BRCA1-216ENST00000484087 SALL3Q9BXA9 1300 aa8.35□□□□□ -1.07
BRCA1-216ENST00000484087 GLRX3O76003 335 aaKnown RBP8.35□□□□□ -1.07
BRCA1-216ENST00000484087 ECE1P42892 770 aa8.35□□□□□ -1.07
BRCA1-216ENST00000484087 ZAP70P43403 619 aa8.35□□□□□ -1.07
BRCA1-216ENST00000484087 RBM25P49756 843 aaKnown RBP8.35□□□□□ -1.07
BRCA1-216ENST00000484087 LBX1P52954 281 aa8.35□□□□□ -1.07
BRCA1-216ENST00000484087 KIF23Q02241 960 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-216ENST00000484087 MECOMQ03112 1051 aa8.35□□□□□ -1.07
BRCA1-216ENST00000484087 CDC42EP5Q6NZY7 148 aa8.35□□□□□ -1.07
BRCA1-216ENST00000484087 ADGRA1Q86SQ6 560 aa8.35□□□□□ -1.07
BRCA1-216ENST00000484087 DZIP1Q86YF9 867 aaKnown RBP8.35□□□□□ -1.07
BRCA1-216ENST00000484087 EDC3Q96F86 508 aaKnown RBP8.35□□□□□ -1.07
BRCA1-216ENST00000484087 ZDHHC15Q96MV8 337 aa8.35□□□□□ -1.07
BRCA1-216ENST00000484087 ANP32EQ9BTT0 268 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms