RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 CYP7A1P22680 504 aa21.88■■□□□ 1.09
HDAC6-225ENST00000483506 MAP3K9P80192 1104 aa21.88■■□□□ 1.09
HDAC6-225ENST00000483506 MAP3K10Q02779 954 aa21.88■■□□□ 1.09
HDAC6-225ENST00000483506 SPRYD7Q5W111 196 aa21.88■■□□□ 1.09
HDAC6-225ENST00000483506 SH3BP5LQ7L8J4 393 aa21.88■■□□□ 1.09
HDAC6-225ENST00000483506 SH3RF3Q8TEJ3 882 aaPredicted RBP21.88■■□□□ 1.09
HDAC6-225ENST00000483506 SLC10A4Q96EP9 437 aa21.88■■□□□ 1.09
HDAC6-225ENST00000483506 CA12O43570 354 aa21.87■■□□□ 1.09
HDAC6-225ENST00000483506 TEX11Q8IYF3 940 aa21.87■■□□□ 1.09
HDAC6-225ENST00000483506 GPATCH3Q96I76 525 aa21.87■■□□□ 1.09
HDAC6-225ENST00000483506 WNK4Q96J92 1243 aa21.87■■□□□ 1.09
HDAC6-225ENST00000483506 ZNF341Q9BYN7 854 aa21.87■■□□□ 1.09
HDAC6-225ENST00000483506 BCL11AQ9H165 835 aa21.87■■□□□ 1.09
HDAC6-225ENST00000483506 ZNF112Q9UJU3 913 aa21.87■■□□□ 1.09
HDAC6-225ENST00000483506 MYH7P12883 1935 aa21.86■■□□□ 1.09
HDAC6-225ENST00000483506 TTC41PQ6P2S7 1318 aa21.86■■□□□ 1.09
HDAC6-225ENST00000483506 PDE6AP16499 860 aa21.86■■□□□ 1.09
HDAC6-225ENST00000483506 PICALMQ13492 652 aa21.86■■□□□ 1.09
HDAC6-225ENST00000483506 VGLL4Q14135 290 aa21.86■■□□□ 1.09
HDAC6-225ENST00000483506 EDC3Q96F86 508 aaKnown RBP21.86■■□□□ 1.09
HDAC6-225ENST00000483506 CSRNP1Q96S65 589 aa21.86■■□□□ 1.09
HDAC6-225ENST00000483506 BEGAINQ9BUH8 593 aa21.86■■□□□ 1.09
HDAC6-225ENST00000483506 OSBPL5Q9H0X9 879 aaPredicted RBP21.86■■□□□ 1.09
HDAC6-225ENST00000483506 SALL3Q9BXA9 1300 aa21.85■■□□□ 1.09
HDAC6-225ENST00000483506 TCRBV5S4A2TA0A5A2 114 aa21.85■■□□□ 1.09
HDAC6-225ENST00000483506 DDTLA6NHG4 134 aaPredicted RBP21.85■■□□□ 1.09
HDAC6-225ENST00000483506 CTCFP49711 727 aaPredicted RBP21.85■■□□□ 1.09
HDAC6-225ENST00000483506 MIGA2Q7L4E1 593 aa21.85■■□□□ 1.09
HDAC6-225ENST00000483506 SMC5Q8IY18 1101 aa21.85■■□□□ 1.09
HDAC6-225ENST00000483506 WRNIP1Q96S55 665 aa21.85■■□□□ 1.09
HDAC6-225ENST00000483506 RWDD1Q9H446 243 aaPredicted RBP21.85■■□□□ 1.09
HDAC6-225ENST00000483506 TM4SF4P48230 202 aa21.84■■□□□ 1.09
HDAC6-225ENST00000483506 SLC9C2Q5TAH2 1124 aa21.84■■□□□ 1.09
HDAC6-225ENST00000483506 RIOK1Q9BRS2 568 aaKnown RBP21.84■■□□□ 1.09
HDAC6-225ENST00000483506 SAGE1Q9NXZ1 904 aa21.84■■□□□ 1.09
HDAC6-225ENST00000483506 CSADQ9Y600 493 aa21.84■■□□□ 1.09
HDAC6-225ENST00000483506 SNCAIPQ9Y6H5 919 aa21.84■■□□□ 1.09
HDAC6-225ENST00000483506 FLT1P17948 1338 aa21.83■■□□□ 1.09
HDAC6-225ENST00000483506 TBC1D12O60347 775 aa21.83■■□□□ 1.09
HDAC6-225ENST00000483506 HSPA8P11142 646 aaKnown RBP21.83■■□□□ 1.09
HDAC6-225ENST00000483506 GJA5P36382 358 aa21.83■■□□□ 1.09
HDAC6-225ENST00000483506 DYNLL1P63167 89 aaKnown RBP21.83■■□□□ 1.09
HDAC6-225ENST00000483506 ELP3Q9H9T3 547 aa21.83■■□□□ 1.09
HDAC6-225ENST00000483506 SIPA1L1O43166 1804 aa21.83■■□□□ 1.08
HDAC6-225ENST00000483506 SPDYE5A6NIY4 337 aa21.82■■□□□ 1.08
HDAC6-225ENST00000483506 PHF20L1A8MW92 1017 aa21.82■■□□□ 1.08
HDAC6-225ENST00000483506 SREBF2Q12772 1141 aa21.82■■□□□ 1.08
HDAC6-225ENST00000483506 NOL9Q5SY16 702 aaKnown RBP21.82■■□□□ 1.08
HDAC6-225ENST00000483506 ANKRD45Q5TZF3 282 aa21.82■■□□□ 1.08
HDAC6-225ENST00000483506 ZSCAN29Q8IWY8 852 aaPredicted RBP21.82■■□□□ 1.08
HDAC6-225ENST00000483506 MIGA1Q8NAN2 632 aa21.82■■□□□ 1.08
HDAC6-225ENST00000483506 OTUD7AQ8TE49 926 aaPredicted RBP21.82■■□□□ 1.08
HDAC6-225ENST00000483506 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.82■■□□□ 1.081e-9■■■■■ 30.8
HDAC6-225ENST00000483506 ZNF532Q9HCE3 1301 aa21.81■■□□□ 1.08
HDAC6-225ENST00000483506 DDX60LQ5H9U9 1706 aaKnown RBP21.81■■□□□ 1.08
HDAC6-225ENST00000483506 MANSC4A6NHS7 340 aaPredicted RBP21.81■■□□□ 1.08
HDAC6-225ENST00000483506 IGHDP01880 384 aa21.81■■□□□ 1.08
HDAC6-225ENST00000483506 ADD2P35612 726 aa21.81■■□□□ 1.08
HDAC6-225ENST00000483506 PI4K2BQ8TCG2 481 aa21.81■■□□□ 1.08
HDAC6-225ENST00000483506 TGFBRAP1Q8WUH2 860 aa21.81■■□□□ 1.08
HDAC6-225ENST00000483506 ZKSCAN4Q969J2 545 aaPredicted RBP21.81■■□□□ 1.08
HDAC6-225ENST00000483506 OPTNQ96CV9 577 aa21.81■■□□□ 1.08
HDAC6-225ENST00000483506 DHX36Q9H2U1 1008 aaKnown RBP21.81■■□□□ 1.08
HDAC6-225ENST00000483506 PRDM10Q9NQV6 1147 aa21.81■■□□□ 1.08
HDAC6-225ENST00000483506 ERC2O15083 957 aa21.8■■□□□ 1.08
HDAC6-225ENST00000483506 MX1P20591 662 aa21.8■■□□□ 1.08
HDAC6-225ENST00000483506 INPP5BP32019 993 aa21.8■■□□□ 1.08
HDAC6-225ENST00000483506 INHBEP58166 350 aa21.8■■□□□ 1.08
HDAC6-225ENST00000483506 MKRN3Q13064 507 aaKnown RBP21.8■■□□□ 1.08
HDAC6-225ENST00000483506 UBE3CQ15386 1083 aa21.8■■□□□ 1.08
HDAC6-225ENST00000483506 TSHZ3Q63HK5 1081 aa21.8■■□□□ 1.08
HDAC6-225ENST00000483506 ERO1BQ86YB8 467 aa21.8■■□□□ 1.08
HDAC6-225ENST00000483506 RNF186Q9NXI6 227 aa21.8■■□□□ 1.08
HDAC6-225ENST00000483506 MAGEB6P1A0A0J9YX57 407 aa21.79■■□□□ 1.08
HDAC6-225ENST00000483506 TESPA1A2RU30 521 aaPredicted RBP21.79■■□□□ 1.08
HDAC6-225ENST00000483506 GLRX3O76003 335 aaKnown RBP21.79■■□□□ 1.08
HDAC6-225ENST00000483506 METTL16Q86W50 562 aaKnown RBP21.79■■□□□ 1.08
HDAC6-225ENST00000483506 MAPKAPK5Q8IW41 473 aa21.79■■□□□ 1.08
HDAC6-225ENST00000483506 ZBTB47Q9UFB7 747 aaPredicted RBP21.79■■□□□ 1.08
HDAC6-225ENST00000483506 STAP2Q9UGK3 403 aa21.79■■□□□ 1.08
HDAC6-225ENST00000483506 MYH1P12882 1939 aa21.78■■□□□ 1.08
HDAC6-225ENST00000483506 DOCK1Q14185 1865 aa21.78■■□□□ 1.08
HDAC6-225ENST00000483506 KBTBD3Q8NAB2 608 aa21.78■■□□□ 1.08
HDAC6-225ENST00000483506 CNKSR2Q8WXI2 1034 aa21.78■■□□□ 1.08
HDAC6-225ENST00000483506 PI4KBQ9UBF8 816 aa21.78■■□□□ 1.08
HDAC6-225ENST00000483506 HERC5Q9UII4 1024 aaKnown RBP21.78■■□□□ 1.08
HDAC6-225ENST00000483506 LBX1P52954 281 aa21.77■■□□□ 1.08
HDAC6-225ENST00000483506 PPATQ06203 517 aa21.77■■□□□ 1.08
HDAC6-225ENST00000483506 PPIL2Q13356 520 aa21.77■■□□□ 1.08
HDAC6-225ENST00000483506 ZSCAN25Q6NSZ9 544 aa21.77■■□□□ 1.08
HDAC6-225ENST00000483506 MS4A4AQ96JQ5 239 aa21.77■■□□□ 1.08
HDAC6-225ENST00000483506 CFHR5Q9BXR6 569 aa21.77■■□□□ 1.08
HDAC6-225ENST00000483506 NAV1Q8NEY1 1877 aa21.77■■□□□ 1.08
HDAC6-225ENST00000483506 IRX6P78412 446 aaPredicted RBP21.76■■□□□ 1.07
HDAC6-225ENST00000483506 SCYL3Q8IZE3 742 aa21.76■■□□□ 1.07
HDAC6-225ENST00000483506 OTUD5Q96G74 571 aa21.76■■□□□ 1.07
HDAC6-225ENST00000483506 CTNND1O60716 968 aaKnown RBP21.75■■□□□ 1.07
HDAC6-225ENST00000483506 SLURP2P0DP57 97 aa21.75■■□□□ 1.07
HDAC6-225ENST00000483506 USP5P45974 858 aa21.75■■□□□ 1.07
HDAC6-225ENST00000483506 GTF2A2P52657 109 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms