RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 PI16Q6UXB8 463 aa17.28■□□□□ 0.36
VARS-226ENST00000483275 SRRDQ9UH36 339 aa17.28■□□□□ 0.36
VARS-226ENST00000483275 GAKO14976 1311 aa17.27■□□□□ 0.36
VARS-226ENST00000483275 MYPNQ86TC9 1320 aa17.27■□□□□ 0.36
VARS-226ENST00000483275 DOCK3Q8IZD9 2030 aa17.27■□□□□ 0.36
VARS-226ENST00000483275 DDTLA6NHG4 134 aaPredicted RBP17.27■□□□□ 0.36
VARS-226ENST00000483275 SEMA3EO15041 775 aa17.27■□□□□ 0.36
VARS-226ENST00000483275 BTDP43251 543 aa17.27■□□□□ 0.36
VARS-226ENST00000483275 PRKCZQ05513 592 aa17.27■□□□□ 0.36
VARS-226ENST00000483275 GADL1Q6ZQY3 521 aa17.27■□□□□ 0.36
VARS-226ENST00000483275 API5Q9BZZ5 524 aaKnown RBP17.27■□□□□ 0.36
VARS-226ENST00000483275 COPRSQ9NQ92 184 aa17.27■□□□□ 0.36
VARS-226ENST00000483275 ZHX2Q9Y6X8 837 aa17.27■□□□□ 0.36
VARS-226ENST00000483275 MYO5AQ9Y4I1 1855 aaKnown RBP17.27■□□□□ 0.35
VARS-226ENST00000483275 A0A1B0GUL7 405 aa17.26■□□□□ 0.35
VARS-226ENST00000483275 SCYL3Q8IZE3 742 aa17.26■□□□□ 0.35
VARS-226ENST00000483275 RAET1EQ8TD07 263 aa17.26■□□□□ 0.35
VARS-226ENST00000483275 ZNF384Q8TF68 577 aa17.26■□□□□ 0.35
VARS-226ENST00000483275 XAGE2Q96GT9 111 aa17.26■□□□□ 0.35
VARS-226ENST00000483275 PARK7Q99497 189 aaKnown RBP17.26■□□□□ 0.35
VARS-226ENST00000483275 FBXO3Q9UK99 471 aa17.26■□□□□ 0.35
VARS-226ENST00000483275 GABRQQ9UN88 632 aa17.26■□□□□ 0.35
VARS-226ENST00000483275 COLQQ9Y215 455 aaPredicted RBP17.26■□□□□ 0.35
VARS-226ENST00000483275 CDK5RAP2Q96SN8 1893 aa17.26■□□□□ 0.35
VARS-226ENST00000483275 SIPA1L1O43166 1804 aa17.26■□□□□ 0.35
VARS-226ENST00000483275 LOC285556D6RIA3 1793 aa17.25■□□□□ 0.35
VARS-226ENST00000483275 MROH7-TTC4A0A0A0MT08 1334 aa17.25■□□□□ 0.35
VARS-226ENST00000483275 SZT2Q5T011 3432 aa17.25■□□□□ 0.35
VARS-226ENST00000483275 H0YGN5 161 aa17.25■□□□□ 0.35
VARS-226ENST00000483275 SRGAP3O43295 1099 aa17.25■□□□□ 0.35
VARS-226ENST00000483275 PTPRAP18433 802 aa17.25■□□□□ 0.35
VARS-226ENST00000483275 RARSP54136 660 aaKnown RBP17.25■□□□□ 0.35
VARS-226ENST00000483275 IDI2Q9BXS1 227 aa17.25■□□□□ 0.35
VARS-226ENST00000483275 PICK1Q9NRD5 415 aa17.25■□□□□ 0.35
VARS-226ENST00000483275 MAST2Q6P0Q8 1798 aa17.25■□□□□ 0.35
VARS-226ENST00000483275 A0A0G2JLL6 359 aaPredicted RBP17.24■□□□□ 0.35
VARS-226ENST00000483275 TRIM75PA6NK02 468 aa17.24■□□□□ 0.35
VARS-226ENST00000483275 ENTPD3O75355 529 aa17.24■□□□□ 0.35
VARS-226ENST00000483275 GNRH1P01148 92 aa17.24■□□□□ 0.35
VARS-226ENST00000483275 BCRP11274 1271 aa17.24■□□□□ 0.35
VARS-226ENST00000483275 CCL5P13501 91 aa17.24■□□□□ 0.35
VARS-226ENST00000483275 GRK4P32298 578 aa17.24■□□□□ 0.35
VARS-226ENST00000483275 FXR1P51114 621 aaKnown RBP eCLIP17.24■□□□□ 0.352e-6■■■□□ 17.9
VARS-226ENST00000483275 MECOMQ03112 1051 aa17.24■□□□□ 0.35
VARS-226ENST00000483275 TBC1D9Q6ZT07 1266 aa17.24■□□□□ 0.35
VARS-226ENST00000483275 PRRT2Q7Z6L0 340 aaPredicted RBP17.24■□□□□ 0.35
VARS-226ENST00000483275 BIN2Q9UBW5 565 aaPredicted RBP17.24■□□□□ 0.35
VARS-226ENST00000483275 CXCL11O14625 94 aa17.23■□□□□ 0.35
VARS-226ENST00000483275 PRMT2P55345 433 aa17.23■□□□□ 0.35
VARS-226ENST00000483275 ZGPATQ8N5A5 531 aaKnown RBP17.23■□□□□ 0.35
VARS-226ENST00000483275 NEUROD6Q96NK8 337 aa17.23■□□□□ 0.35
VARS-226ENST00000483275 AFG3L2Q9Y4W6 797 aa17.23■□□□□ 0.35
VARS-226ENST00000483275 ELNP15502 786 aa17.22■□□□□ 0.35
VARS-226ENST00000483275 FCGRTP55899 365 aa17.22■□□□□ 0.35
VARS-226ENST00000483275 HMG20BQ9P0W2 317 aa17.22■□□□□ 0.35
VARS-226ENST00000483275 RHBDL3P58872 404 aa17.21■□□□□ 0.35
VARS-226ENST00000483275 MVPQ14764 893 aaKnown RBP17.21■□□□□ 0.35
VARS-226ENST00000483275 TREML2Q5T2D2 321 aa17.21■□□□□ 0.35
VARS-226ENST00000483275 RNF208Q9H0X6 261 aa17.21■□□□□ 0.35
VARS-226ENST00000483275 UNC93B1Q9H1C4 597 aa17.21■□□□□ 0.35
VARS-226ENST00000483275 ALPK3Q96L96 1907 aa17.21■□□□□ 0.35
VARS-226ENST00000483275 FOCADQ5VW36 1801 aa17.21■□□□□ 0.35
VARS-226ENST00000483275 PDS5AQ29RF7 1337 aaKnown RBP17.21■□□□□ 0.34
VARS-226ENST00000483275 CT47B1P0C2W7 299 aaPredicted RBP17.2■□□□□ 0.34
VARS-226ENST00000483275 HOXD10P28358 340 aa17.2■□□□□ 0.34
VARS-226ENST00000483275 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
VARS-226ENST00000483275 ERICH6Q7L0X2 663 aa17.2■□□□□ 0.34
VARS-226ENST00000483275 CLUAP1Q96AJ1 413 aa17.2■□□□□ 0.34
VARS-226ENST00000483275 TAOK2Q9UL54 1235 aa17.2■□□□□ 0.34
VARS-226ENST00000483275 GPR75-ASB3A0A0A6YYF3 556 aa17.19■□□□□ 0.34
VARS-226ENST00000483275 PNMA6EA0A0J9YXQ4 647 aa17.19■□□□□ 0.34
VARS-226ENST00000483275 BCAR3O75815 825 aa17.19■□□□□ 0.34
VARS-226ENST00000483275 GNAI3P08754 354 aa17.19■□□□□ 0.34
VARS-226ENST00000483275 TRIM27P14373 513 aa17.19■□□□□ 0.34
VARS-226ENST00000483275 RRP1BQ14684 758 aaKnown RBP17.19■□□□□ 0.34
VARS-226ENST00000483275 GORABQ5T7V8 394 aa17.19■□□□□ 0.34
VARS-226ENST00000483275 SPTY2D1Q68D10 685 aaPredicted RBP17.19■□□□□ 0.34
VARS-226ENST00000483275 FASTKD5Q7L8L6 764 aaKnown RBP17.19■□□□□ 0.34
VARS-226ENST00000483275 SPATA5Q8NB90 893 aa17.19■□□□□ 0.34
VARS-226ENST00000483275 SMCR8Q8TEV9 937 aaPredicted RBP17.19■□□□□ 0.34
VARS-226ENST00000483275 DPF3Q92784 378 aa17.19■□□□□ 0.34
VARS-226ENST00000483275 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
VARS-226ENST00000483275 RAI14Q9P0K7 980 aa17.19■□□□□ 0.34
VARS-226ENST00000483275 AKAP2Q9Y2D5 859 aa17.19■□□□□ 0.34
VARS-226ENST00000483275 ADCY3O60266 1144 aa17.18■□□□□ 0.34
VARS-226ENST00000483275 CTNND1O60716 968 aaKnown RBP17.18■□□□□ 0.34
VARS-226ENST00000483275 MCAMP43121 646 aa17.18■□□□□ 0.34
VARS-226ENST00000483275 GJA8P48165 433 aa17.18■□□□□ 0.34
VARS-226ENST00000483275 FLT3LGP49771 235 aa17.18■□□□□ 0.34
VARS-226ENST00000483275 MAP3K10Q02779 954 aa17.18■□□□□ 0.34
VARS-226ENST00000483275 MTX1Q13505 466 aa17.18■□□□□ 0.34
VARS-226ENST00000483275 SLF2Q8IX21 1173 aa17.18■□□□□ 0.34
VARS-226ENST00000483275 ANKRD13CQ8N6S4 541 aa17.18■□□□□ 0.34
VARS-226ENST00000483275 NSUN4Q96CB9 384 aaKnown RBP17.18■□□□□ 0.34
VARS-226ENST00000483275 FAM163AQ96GL9 167 aaPredicted RBP17.18■□□□□ 0.34
VARS-226ENST00000483275 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.18■□□□□ 0.34
VARS-226ENST00000483275 SNRKQ9NRH2 765 aa17.18■□□□□ 0.34
VARS-226ENST00000483275 HDAC5Q9UQL6 1122 aa17.18■□□□□ 0.34
VARS-226ENST00000483275 PLXNB2O15031 1838 aa17.17■□□□□ 0.34
VARS-226ENST00000483275 TNPO2O14787 897 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms