RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 CNTNAP1P78357 1384 aa12.18□□□□□ -0.46
SPTLC1-206ENST00000482632 MROH7-TTC4A0A0A0MT08 1334 aa12.17□□□□□ -0.46
SPTLC1-206ENST00000482632 CYP2E1P05181 493 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1-206ENST00000482632 LDHCP07864 332 aa12.17□□□□□ -0.46
SPTLC1-206ENST00000482632 BTDP43251 543 aa12.17□□□□□ -0.46
SPTLC1-206ENST00000482632 TCP10Q12799 353 aa12.17□□□□□ -0.46
SPTLC1-206ENST00000482632 NAA16Q6N069 864 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1-206ENST00000482632 CYP4F22Q6NT55 531 aa12.17□□□□□ -0.46
SPTLC1-206ENST00000482632 APOBEC3HQ6NTF7 200 aaKnown RBP12.17□□□□□ -0.46
SPTLC1-206ENST00000482632 MOB2Q70IA6 237 aa12.17□□□□□ -0.46
SPTLC1-206ENST00000482632 TMEM39BQ9GZU3 492 aa12.17□□□□□ -0.46
SPTLC1-206ENST00000482632 BOLA2Q9H3K6 86 aa12.17□□□□□ -0.46
SPTLC1-206ENST00000482632 PIH1D3Q9NQM4 214 aaKnown RBP12.17□□□□□ -0.46
SPTLC1-206ENST00000482632 GOLIM4O00461 696 aa12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 VEGFBP49765 207 aa12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 AAMPQ13685 434 aa12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 NBPF12Q5TAG4 269 aaPredicted RBP12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 ANKRD45Q5TZF3 282 aa12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 TSHZ3Q63HK5 1081 aa12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 CDC42EP5Q6NZY7 148 aa12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 ARMC9Q7Z3E5 817 aa12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 SAPCD2Q86UD0 394 aa12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 ZNF512BQ96KM6 892 aaPredicted RBP12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 CAPNS2Q96L46 248 aa12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 MRIQ9BWK5 157 aa12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 RWDD1Q9H446 243 aaPredicted RBP12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 ANTXR1Q9H6X2 564 aa12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 FZD1Q9UP38 647 aa12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 PPP2R3BQ9Y5P8 575 aa12.16□□□□□ -0.46
SPTLC1-206ENST00000482632 CDK5RAP2Q96SN8 1893 aa12.15□□□□□ -0.46
SPTLC1-206ENST00000482632 RASSF10A6NK89 507 aa12.15□□□□□ -0.46
SPTLC1-206ENST00000482632 UBE2Q2LH0YL09 131 aa12.15□□□□□ -0.46
SPTLC1-206ENST00000482632 ECE1P42892 770 aa12.15□□□□□ -0.46
SPTLC1-206ENST00000482632 ZNF157P51786 506 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-206ENST00000482632 PICALMQ13492 652 aa12.15□□□□□ -0.46
SPTLC1-206ENST00000482632 SUPT20HL1Q3ZLR7 823 aa12.15□□□□□ -0.46
SPTLC1-206ENST00000482632 B4GALNT3Q6L9W6 998 aa12.15□□□□□ -0.46
SPTLC1-206ENST00000482632 ZSCAN29Q8IWY8 852 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1-206ENST00000482632 NSUN4Q96CB9 384 aaKnown RBP12.15□□□□□ -0.46
SPTLC1-206ENST00000482632 ANGEL1Q9UNK9 670 aaKnown RBP12.15□□□□□ -0.46
SPTLC1-206ENST00000482632 WDR33Q9C0J8 1336 aaKnown RBP12.14□□□□□ -0.47
SPTLC1-206ENST00000482632 POTEFA5A3E0 1075 aa12.14□□□□□ -0.47
SPTLC1-206ENST00000482632 PPP1R12BO60237 982 aaPredicted RBP12.14□□□□□ -0.47
SPTLC1-206ENST00000482632 PPP1R37O75864 691 aa12.14□□□□□ -0.47
SPTLC1-206ENST00000482632 CYP7A1P22680 504 aa12.14□□□□□ -0.47
SPTLC1-206ENST00000482632 MAP3K12Q12852 859 aa12.14□□□□□ -0.47
SPTLC1-206ENST00000482632 HDAC1Q13547 482 aaPredicted RBP12.14□□□□□ -0.47
SPTLC1-206ENST00000482632 TTF1Q15361 905 aaPredicted RBP12.14□□□□□ -0.47
SPTLC1-206ENST00000482632 MAGEB6Q8N7X4 407 aa12.14□□□□□ -0.47
SPTLC1-206ENST00000482632 GCC1Q96CN9 775 aa12.14□□□□□ -0.47
SPTLC1-206ENST00000482632 EDC3Q96F86 508 aaKnown RBP12.14□□□□□ -0.47
SPTLC1-206ENST00000482632 AATFQ9NY61 560 aaKnown RBP eCLIP12.14□□□□□ -0.47
SPTLC1-206ENST00000482632 OTOFQ9HC10 1997 aa12.14□□□□□ -0.47
SPTLC1-206ENST00000482632 GAKO14976 1311 aa12.13□□□□□ -0.47
SPTLC1-206ENST00000482632 FOXN1O15353 648 aa12.13□□□□□ -0.47
SPTLC1-206ENST00000482632 RGS3P49796 1198 aa12.13□□□□□ -0.47
SPTLC1-206ENST00000482632 NFIAQ12857 509 aa12.13□□□□□ -0.47
SPTLC1-206ENST00000482632 RGMBQ6NW40 437 aa12.13□□□□□ -0.47
SPTLC1-206ENST00000482632 CDAN1Q8IWY9 1227 aa12.13□□□□□ -0.47
SPTLC1-206ENST00000482632 TEX11Q8IYF3 940 aa12.13□□□□□ -0.47
SPTLC1-206ENST00000482632 MS4A4AQ96JQ5 239 aa12.13□□□□□ -0.47
SPTLC1-206ENST00000482632 ECHDC1Q9NTX5 307 aa12.13□□□□□ -0.47
SPTLC1-206ENST00000482632 PAG1Q9NWQ8 432 aa12.13□□□□□ -0.47
SPTLC1-206ENST00000482632 MYH1P12882 1939 aa12.13□□□□□ -0.47
SPTLC1-206ENST00000482632 FOCADQ5VW36 1801 aa12.12□□□□□ -0.47
SPTLC1-206ENST00000482632 AOC2O75106 756 aa12.12□□□□□ -0.47
SPTLC1-206ENST00000482632 BAG3O95817 575 aa12.12□□□□□ -0.47
SPTLC1-206ENST00000482632 MAP4K4O95819 1239 aaPredicted RBP12.12□□□□□ -0.47
SPTLC1-206ENST00000482632 ATP5JP18859 108 aa12.12□□□□□ -0.47
SPTLC1-206ENST00000482632 IREB2P48200 963 aaKnown RBP12.12□□□□□ -0.47
SPTLC1-206ENST00000482632 FKBP1BP68106 108 aa12.12□□□□□ -0.47
SPTLC1-206ENST00000482632 MIGA1Q8NAN2 632 aa12.12□□□□□ -0.47
SPTLC1-206ENST00000482632 OTUD7AQ8TE49 926 aaPredicted RBP12.12□□□□□ -0.47
SPTLC1-206ENST00000482632 SH3RF3Q8TEJ3 882 aaPredicted RBP12.12□□□□□ -0.47
SPTLC1-206ENST00000482632 ZNF384Q8TF68 577 aa12.12□□□□□ -0.47
SPTLC1-206ENST00000482632 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.12□□□□□ -0.47
SPTLC1-206ENST00000482632 LNPKQ9C0E8 428 aa12.12□□□□□ -0.47
SPTLC1-206ENST00000482632 SSC5DA1L4H1 1573 aa12.12□□□□□ -0.47
SPTLC1-206ENST00000482632 GPR75-ASB3A0A0A6YYF3 556 aa12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 ERC2O15083 957 aa12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 IGHDP01880 384 aa12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 NEFLP07196 543 aa12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 PLCG2P16885 1265 aa12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 DYNLL1P63167 89 aaKnown RBP12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 SLC9C2Q5TAH2 1124 aa12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 FKBP1CQ5VVH2 108 aa12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 MIGA2Q7L4E1 593 aa12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 FAM83AQ86UY5 434 aa12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 FAM151AQ8WW52 585 aa12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 HOOK2Q96ED9 719 aa12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 FAM163AQ96GL9 167 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 HAUS7Q99871 368 aa12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 FAM198AQ9UFP1 575 aa12.11□□□□□ -0.47
SPTLC1-206ENST00000482632 NAV1Q8NEY1 1877 aa12.1□□□□□ -0.47
SPTLC1-206ENST00000482632 CENPBP07199 599 aaPredicted RBP12.1□□□□□ -0.47
SPTLC1-206ENST00000482632 PDE6AP16499 860 aa12.1□□□□□ -0.47
SPTLC1-206ENST00000482632 MX1P20591 662 aa12.1□□□□□ -0.47
SPTLC1-206ENST00000482632 SLC4A8Q2Y0W8 1093 aa12.1□□□□□ -0.47
SPTLC1-206ENST00000482632 DCAF15Q66K64 600 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms