RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 MYO3BQ8WXR4 1341 aa11.39□□□□□ -0.59
HLA-B-253ENST00000481849 RNF223E7ERA6 249 aa11.39□□□□□ -0.59
HLA-B-253ENST00000481849 F8W031 263 aaPredicted RBP11.39□□□□□ -0.59
HLA-B-253ENST00000481849 RASAL3Q86YV0 1011 aa11.39□□□□□ -0.59
HLA-B-253ENST00000481849 CSRNP1Q96S65 589 aa11.39□□□□□ -0.59
HLA-B-253ENST00000481849 CD209Q9NNX6 404 aa11.39□□□□□ -0.59
HLA-B-253ENST00000481849 C9orf78Q9NZ63 289 aaPredicted RBP11.39□□□□□ -0.59
HLA-B-253ENST00000481849 CACNA1GO43497 2377 aa11.39□□□□□ -0.59
HLA-B-253ENST00000481849 GRM8O00222 908 aa11.38□□□□□ -0.59
HLA-B-253ENST00000481849 TLL1O43897 1013 aa11.38□□□□□ -0.59
HLA-B-253ENST00000481849 NR1I2O75469 434 aa11.38□□□□□ -0.59
HLA-B-253ENST00000481849 CCDC57Q2TAC2 916 aa11.38□□□□□ -0.59
HLA-B-253ENST00000481849 CERS5Q8N5B7 392 aa11.38□□□□□ -0.59
HLA-B-253ENST00000481849 CNNM1Q9NRU3 951 aa11.38□□□□□ -0.59
HLA-B-253ENST00000481849 HDAC9Q9UKV0 1011 aa11.38□□□□□ -0.59
HLA-B-253ENST00000481849 NF2P35240 595 aa11.37□□□□□ -0.59
HLA-B-253ENST00000481849 SLC19A1P41440 591 aa11.37□□□□□ -0.59
HLA-B-253ENST00000481849 FKBP1BP68106 108 aa11.37□□□□□ -0.59
HLA-B-253ENST00000481849 LDHAL6AQ6ZMR3 332 aa11.37□□□□□ -0.59
HLA-B-253ENST00000481849 METTL3Q86U44 580 aaKnown RBP11.37□□□□□ -0.59
HLA-B-253ENST00000481849 SRCIN1Q9C0H9 1055 aa11.37□□□□□ -0.59
HLA-B-253ENST00000481849 SAGE1Q9NXZ1 904 aa11.37□□□□□ -0.59
HLA-B-253ENST00000481849 FZD1Q9UP38 647 aa11.37□□□□□ -0.59
HLA-B-253ENST00000481849 PCDHAC2Q9Y5I4 1007 aa11.37□□□□□ -0.59
HLA-B-253ENST00000481849 CLRN2A0PK11 232 aa11.36□□□□□ -0.59
HLA-B-253ENST00000481849 DLGAP5Q15398 846 aa11.36□□□□□ -0.59
HLA-B-253ENST00000481849 ZNF804AQ7Z570 1209 aa11.36□□□□□ -0.59
HLA-B-253ENST00000481849 SUCLG2Q96I99 432 aa11.36□□□□□ -0.59
HLA-B-253ENST00000481849 SPEF2Q9C093 1822 aa11.36□□□□□ -0.59
HLA-B-253ENST00000481849 LAMA2P24043 3122 aaKnown RBP11.36□□□□□ -0.59
HLA-B-253ENST00000481849 IRS2Q9Y4H2 1338 aa11.35□□□□□ -0.59
HLA-B-253ENST00000481849 ALDH1L1O75891 902 aa11.35□□□□□ -0.59
HLA-B-253ENST00000481849 NBPF7P0C2Y1 421 aaPredicted RBP11.35□□□□□ -0.59
HLA-B-253ENST00000481849 APOBEC3FQ8IUX4 373 aaKnown RBP11.35□□□□□ -0.59
HLA-B-253ENST00000481849 PUS3Q9BZE2 481 aaKnown RBP11.35□□□□□ -0.59
HLA-B-253ENST00000481849 S1PR4O95977 384 aa11.34□□□□□ -0.59
HLA-B-253ENST00000481849 IL1R1P14778 569 aa11.34□□□□□ -0.59
HLA-B-253ENST00000481849 GYG1P46976 350 aa11.34□□□□□ -0.59
HLA-B-253ENST00000481849 RBM5P52756 815 aaKnown RBP eCLIP11.34□□□□□ -0.59
HLA-B-253ENST00000481849 PTPN12Q05209 780 aaKnown RBP11.34□□□□□ -0.59
HLA-B-253ENST00000481849 CFAP100Q494V2 611 aa11.34□□□□□ -0.59
HLA-B-253ENST00000481849 C15orf52Q6ZUT6 534 aaKnown RBP11.34□□□□□ -0.59
HLA-B-253ENST00000481849 ZBED3Q96IU2 234 aaPredicted RBP11.34□□□□□ -0.59
HLA-B-253ENST00000481849 VEZTQ9HBM0 779 aa11.34□□□□□ -0.59
HLA-B-253ENST00000481849 ANGEL1Q9UNK9 670 aaKnown RBP11.34□□□□□ -0.59
HLA-B-253ENST00000481849 AOX1Q06278 1338 aa11.34□□□□□ -0.59
HLA-B-253ENST00000481849 TBC1D8O95759 1140 aa11.33□□□□□ -0.6
HLA-B-253ENST00000481849 ADH1BP00325 375 aa11.33□□□□□ -0.6
HLA-B-253ENST00000481849 FECHP22830 423 aa11.33□□□□□ -0.6
HLA-B-253ENST00000481849 MMP14P50281 582 aa11.33□□□□□ -0.6
HLA-B-253ENST00000481849 ARMC9Q7Z3E5 817 aa11.33□□□□□ -0.6
HLA-B-253ENST00000481849 ANKLE1Q8NAG6 615 aa11.33□□□□□ -0.6
HLA-B-253ENST00000481849 KAZALD1Q96I82 304 aa11.33□□□□□ -0.6
HLA-B-253ENST00000481849 DEFB129Q9H1M3 183 aa11.33□□□□□ -0.6
HLA-B-253ENST00000481849 PAPPA2Q9BXP8 1791 aa11.33□□□□□ -0.6
HLA-B-253ENST00000481849 ZNF521Q96K83 1311 aa11.33□□□□□ -0.6
HLA-B-253ENST00000481849 MYO1BO43795 1136 aa11.32□□□□□ -0.6
HLA-B-253ENST00000481849 SCUBE3Q8IX30 993 aa11.32□□□□□ -0.6
HLA-B-253ENST00000481849 RDH13Q8NBN7 331 aa11.32□□□□□ -0.6
HLA-B-253ENST00000481849 PRMT6Q96LA8 375 aaPredicted RBP11.32□□□□□ -0.6
HLA-B-253ENST00000481849 BICC1Q9H694 974 aaKnown RBP11.32□□□□□ -0.6
HLA-B-253ENST00000481849 IQSEC3Q9UPP2 1182 aaPredicted RBP11.32□□□□□ -0.6
HLA-B-253ENST00000481849 HIBADHP31937 336 aaKnown RBP11.31□□□□□ -0.6
HLA-B-253ENST00000481849 CHAF1AQ13111 956 aaPredicted RBP11.31□□□□□ -0.6
HLA-B-253ENST00000481849 PUS10Q3MIT2 529 aaKnown RBP11.31□□□□□ -0.6
HLA-B-253ENST00000481849 METTL24Q5JXM2 366 aa11.31□□□□□ -0.6
HLA-B-253ENST00000481849 MFSD14BQ5SR56 506 aa11.31□□□□□ -0.6
HLA-B-253ENST00000481849 CTU1Q7Z7A3 348 aaKnown RBP11.31□□□□□ -0.6
HLA-B-253ENST00000481849 ANKRD44Q8N8A2 993 aa11.31□□□□□ -0.6
HLA-B-253ENST00000481849 KLHDC4Q8TBB5 520 aa11.31□□□□□ -0.6
HLA-B-253ENST00000481849 SSH1Q8WYL5 1049 aa11.31□□□□□ -0.6
HLA-B-253ENST00000481849 DAXXQ9UER7 740 aaPredicted RBP11.31□□□□□ -0.6
HLA-B-253ENST00000481849 MYH3P11055 1940 aa11.31□□□□□ -0.6
HLA-B-253ENST00000481849 FKBP1AP62942 108 aaKnown RBP11.3□□□□□ -0.6
HLA-B-253ENST00000481849 SREBF2Q12772 1141 aa11.3□□□□□ -0.6
HLA-B-253ENST00000481849 UBE4AQ14139 1066 aa11.3□□□□□ -0.6
HLA-B-253ENST00000481849 LRRC24Q50LG9 513 aa11.3□□□□□ -0.6
HLA-B-253ENST00000481849 LDLRAD1Q5T700 205 aa11.3□□□□□ -0.6
HLA-B-253ENST00000481849 NBPF12Q5TAG4 269 aaPredicted RBP11.3□□□□□ -0.6
HLA-B-253ENST00000481849 SPRYD7Q5W111 196 aa11.3□□□□□ -0.6
HLA-B-253ENST00000481849 VPS37DQ86XT2 251 aa11.3□□□□□ -0.6
HLA-B-253ENST00000481849 MTMR14Q8NCE2 650 aa11.3□□□□□ -0.6
HLA-B-253ENST00000481849 TDRD7Q8NHU6 1098 aaKnown RBP11.3□□□□□ -0.6
HLA-B-253ENST00000481849 ZNF296Q8WUU4 475 aaPredicted RBP11.3□□□□□ -0.6
HLA-B-253ENST00000481849 SLC10A4Q96EP9 437 aa11.3□□□□□ -0.6
HLA-B-253ENST00000481849 CLMNQ96JQ2 1002 aa11.3□□□□□ -0.6
HLA-B-253ENST00000481849 FAM84BQ96KN1 310 aaPredicted RBP11.3□□□□□ -0.6
HLA-B-253ENST00000481849 SLC6A16Q9GZN6 736 aa11.3□□□□□ -0.6
HLA-B-253ENST00000481849 TTF2Q9UNY4 1162 aaKnown RBP11.3□□□□□ -0.6
HLA-B-253ENST00000481849 PSME4Q14997 1843 aa11.3□□□□□ -0.6
HLA-B-253ENST00000481849 E9PSI1 815 aa11.29□□□□□ -0.6
HLA-B-253ENST00000481849 FRAT2O75474 233 aaPredicted RBP11.29□□□□□ -0.6
HLA-B-253ENST00000481849 TM4SF4P48230 202 aa11.29□□□□□ -0.6
HLA-B-253ENST00000481849 RASA3Q14644 834 aa11.29□□□□□ -0.6
HLA-B-253ENST00000481849 R3HDMLQ9H3Y0 253 aa11.29□□□□□ -0.6
HLA-B-253ENST00000481849 TDRD3Q9H7E2 651 aaKnown RBP11.29□□□□□ -0.6
HLA-B-253ENST00000481849 RIPOR2Q9Y4F9 1068 aa11.29□□□□□ -0.6
HLA-B-253ENST00000481849 UTYO14607 1347 aa11.29□□□□□ -0.6
HLA-B-253ENST00000481849 FAM205AQ6ZU69 1335 aa11.29□□□□□ -0.6
HLA-B-253ENST00000481849 MROH5Q6ZUA9 1318 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms