RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 GIPRP48546 466 aa11.22□□□□□ -0.61
PDCD4-206ENST00000481353 ZNF165P49910 485 aa11.22□□□□□ -0.61
PDCD4-206ENST00000481353 TBC1D8BQ0IIM8 1120 aa11.22□□□□□ -0.61
PDCD4-206ENST00000481353 ADAMTSL4Q6UY14 1074 aa11.22□□□□□ -0.61
PDCD4-206ENST00000481353 CCDC81Q6ZN84 652 aa11.22□□□□□ -0.61
PDCD4-206ENST00000481353 MICALL1Q8N3F8 863 aa11.22□□□□□ -0.61
PDCD4-206ENST00000481353 FRRS1LQ9P0K9 344 aa11.22□□□□□ -0.61
PDCD4-206ENST00000481353 SBNO2Q9Y2G9 1366 aa11.22□□□□□ -0.61
PDCD4-206ENST00000481353 MRPL42Q9Y6G3 142 aaKnown RBP11.22□□□□□ -0.61
PDCD4-206ENST00000481353 HMGXB3Q12766 1538 aa11.21□□□□□ -0.61
PDCD4-206ENST00000481353 TLR3O15455 904 aaKnown RBP11.21□□□□□ -0.61
PDCD4-206ENST00000481353 CPB1P15086 417 aa11.21□□□□□ -0.61
PDCD4-206ENST00000481353 HSD3B2P26439 372 aa11.21□□□□□ -0.61
PDCD4-206ENST00000481353 ARNTP27540 789 aa11.21□□□□□ -0.61
PDCD4-206ENST00000481353 ADH7P40394 386 aa11.21□□□□□ -0.61
PDCD4-206ENST00000481353 RASA3Q14644 834 aa11.21□□□□□ -0.61
PDCD4-206ENST00000481353 PERM1Q5SV97 790 aa11.21□□□□□ -0.61
PDCD4-206ENST00000481353 LLGL2Q6P1M3 1020 aa11.21□□□□□ -0.61
PDCD4-206ENST00000481353 REC114Q7Z4M0 266 aa11.21□□□□□ -0.61
PDCD4-206ENST00000481353 OR6P1Q8NGX9 317 aa11.21□□□□□ -0.61
PDCD4-206ENST00000481353 GAL3ST3Q96A11 431 aa11.21□□□□□ -0.61
PDCD4-206ENST00000481353 SRPK1Q96SB4 655 aaKnown RBP11.21□□□□□ -0.61
PDCD4-206ENST00000481353 EMILIN2Q9BXX0 1053 aa11.21□□□□□ -0.61
PDCD4-206ENST00000481353 NAGPAQ9UK23 515 aa11.21□□□□□ -0.61
PDCD4-206ENST00000481353 R3HCC1Q9Y3T6 440 aaKnown RBP11.21□□□□□ -0.61
PDCD4-206ENST00000481353 NCAPD3P42695 1498 aa11.2□□□□□ -0.62
PDCD4-206ENST00000481353 TONSLQ96HA7 1378 aa11.2□□□□□ -0.62
PDCD4-206ENST00000481353 GNB5O14775 395 aa11.2□□□□□ -0.62
PDCD4-206ENST00000481353 ESRRAP11474 423 aaPredicted RBP11.2□□□□□ -0.62
PDCD4-206ENST00000481353 EIF6P56537 245 aaKnown RBP11.2□□□□□ -0.62
PDCD4-206ENST00000481353 SEPT6Q14141 434 aa11.2□□□□□ -0.62
PDCD4-206ENST00000481353 TCEAL1Q15170 157 aa11.2□□□□□ -0.62
PDCD4-206ENST00000481353 ANKRD13AQ8IZ07 590 aa11.2□□□□□ -0.62
PDCD4-206ENST00000481353 STK35Q8TDR2 534 aa11.2□□□□□ -0.62
PDCD4-206ENST00000481353 JARID2Q92833 1246 aaPredicted RBP11.2□□□□□ -0.62
PDCD4-206ENST00000481353 SPOCK3Q9BQ16 436 aa11.2□□□□□ -0.62
PDCD4-206ENST00000481353 SNTG2Q9NY99 539 aa11.2□□□□□ -0.62
PDCD4-206ENST00000481353 ZNRF3Q9ULT6 936 aa11.2□□□□□ -0.62
PDCD4-206ENST00000481353 SMAD7O15105 426 aaKnown RBP11.19□□□□□ -0.62
PDCD4-206ENST00000481353 IMPDH2P12268 514 aa11.19□□□□□ -0.62
PDCD4-206ENST00000481353 MCM4P33991 863 aa11.19□□□□□ -0.62
PDCD4-206ENST00000481353 ZNF252P-AS1Q0IIN9 211 aa11.19□□□□□ -0.62
PDCD4-206ENST00000481353 ELMSAN1Q6PJG2 1045 aa11.19□□□□□ -0.62
PDCD4-206ENST00000481353 TTC9Q92623 222 aa11.19□□□□□ -0.62
PDCD4-206ENST00000481353 DEPDC7Q96QD5 511 aa11.19□□□□□ -0.62
PDCD4-206ENST00000481353 FERD3LQ96RJ6 166 aa11.19□□□□□ -0.62
PDCD4-206ENST00000481353 LPIN3Q9BQK8 851 aa11.19□□□□□ -0.62
PDCD4-206ENST00000481353 SMG9Q9H0W8 520 aaKnown RBP11.19□□□□□ -0.62
PDCD4-206ENST00000481353 MSRB2Q9Y3D2 182 aa11.19□□□□□ -0.62
PDCD4-206ENST00000481353 AQRO60306 1485 aaKnown RBP eCLIP11.19□□□□□ -0.62
PDCD4-206ENST00000481353 M0R082 166 aa11.18□□□□□ -0.62
PDCD4-206ENST00000481353 ENPP3O14638 875 aa11.18□□□□□ -0.62
PDCD4-206ENST00000481353 CACTIN-AS1Q8N1I8 211 aa11.18□□□□□ -0.62
PDCD4-206ENST00000481353 FAM169BQ8N8A8 192 aa11.18□□□□□ -0.62
PDCD4-206ENST00000481353 RBBP8NLQ8NC74 664 aaPredicted RBP11.18□□□□□ -0.62
PDCD4-206ENST00000481353 ZNF417Q8TAU3 575 aa11.18□□□□□ -0.62
PDCD4-206ENST00000481353 GRIN3AQ8TCU5 1115 aa11.18□□□□□ -0.62
PDCD4-206ENST00000481353 DDX54Q8TDD1 881 aaKnown RBP11.18□□□□□ -0.62
PDCD4-206ENST00000481353 ZNF587Q96SQ5 575 aaPredicted RBP11.18□□□□□ -0.62
PDCD4-206ENST00000481353 BRMS1Q9HCU9 246 aa11.18□□□□□ -0.62
PDCD4-206ENST00000481353 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.18□□□□□ -0.62
PDCD4-206ENST00000481353 TRIM33Q9UPN9 1127 aa11.18□□□□□ -0.62
PDCD4-206ENST00000481353 CUX1P39880 1505 aa11.18□□□□□ -0.62
PDCD4-206ENST00000481353 FAM229AH3BQW9 127 aa11.17□□□□□ -0.62
PDCD4-206ENST00000481353 BPNT1O95861 308 aa11.17□□□□□ -0.62
PDCD4-206ENST00000481353 C20orf204Q6ZNR8 217 aa11.17□□□□□ -0.62
PDCD4-206ENST00000481353 PDZD3Q86UT5 571 aa11.17□□□□□ -0.62
PDCD4-206ENST00000481353 CRBNQ96SW2 442 aa11.17□□□□□ -0.62
PDCD4-206ENST00000481353 FAM177BA6PVY3 158 aa11.16□□□□□ -0.62
PDCD4-206ENST00000481353 CHRNA4P43681 627 aa11.16□□□□□ -0.62
PDCD4-206ENST00000481353 RPL6Q02878 288 aaKnown RBP11.16□□□□□ -0.62
PDCD4-206ENST00000481353 IKBKEQ14164 716 aa11.16□□□□□ -0.62
PDCD4-206ENST00000481353 PLVAPQ9BX97 442 aa11.16□□□□□ -0.62
PDCD4-206ENST00000481353 CCDC113Q9H0I3 377 aa11.16□□□□□ -0.62
PDCD4-206ENST00000481353 EHMT1Q9H9B1 1298 aa11.16□□□□□ -0.62
PDCD4-206ENST00000481353 CBX8Q9HC52 389 aa11.16□□□□□ -0.62
PDCD4-206ENST00000481353 CACNA2D2Q9NY47 1150 aa11.16□□□□□ -0.62
PDCD4-206ENST00000481353 CFTRP13569 1480 aa11.16□□□□□ -0.62
PDCD4-206ENST00000481353 CFAP43Q8NDM7 1665 aa11.16□□□□□ -0.62
PDCD4-206ENST00000481353 TRIM37O94972 964 aa11.15□□□□□ -0.62
PDCD4-206ENST00000481353 AP3B2Q13367 1082 aa11.15□□□□□ -0.62
PDCD4-206ENST00000481353 FAM50AQ14320 339 aaKnown RBP11.15□□□□□ -0.62
PDCD4-206ENST00000481353 SIN3AQ96ST3 1273 aa11.15□□□□□ -0.62
PDCD4-206ENST00000481353 LACRTQ9GZZ8 138 aa11.15□□□□□ -0.62
PDCD4-206ENST00000481353 SOX17Q9H6I2 414 aaPredicted RBP11.15□□□□□ -0.62
PDCD4-206ENST00000481353 CARMIL1Q5VZK9 1371 aa11.15□□□□□ -0.63
PDCD4-206ENST00000481353 FAM221BA6H8Z2 402 aa11.14□□□□□ -0.63
PDCD4-206ENST00000481353 CLSTN1O94985 981 aa11.14□□□□□ -0.63
PDCD4-206ENST00000481353 ATE1O95260 518 aa11.14□□□□□ -0.63
PDCD4-206ENST00000481353 CDC27P30260 824 aa11.14□□□□□ -0.63
PDCD4-206ENST00000481353 CABP4P57796 275 aa11.14□□□□□ -0.63
PDCD4-206ENST00000481353 CLCQ05315 142 aa11.14□□□□□ -0.63
PDCD4-206ENST00000481353 GK5Q6ZS86 529 aa11.14□□□□□ -0.63
PDCD4-206ENST00000481353 CD163Q86VB7 1156 aa11.14□□□□□ -0.63
PDCD4-206ENST00000481353 CELF2-AS1Q8N7Q2 184 aa11.14□□□□□ -0.63
PDCD4-206ENST00000481353 RNPC3Q96LT9 517 aaKnown RBP11.14□□□□□ -0.63
PDCD4-206ENST00000481353 SH2B1Q9NRF2 756 aaPredicted RBP11.14□□□□□ -0.63
PDCD4-206ENST00000481353 ACTR10Q9NZ32 417 aa11.14□□□□□ -0.63
PDCD4-206ENST00000481353 UACAQ9BZF9 1416 aa11.14□□□□□ -0.63
PDCD4-206ENST00000481353 EFCAB5A4FU69 1503 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms