RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 CHST12Q9NRB3 414 aa7.53□□□□□ -1.2
SGIP1-209ENST00000480548 GNL3LQ9NVN8 582 aaKnown RBP7.53□□□□□ -1.2
SGIP1-209ENST00000480548 PNMA2Q9UL42 364 aa7.53□□□□□ -1.2
SGIP1-209ENST00000480548 KCNH4Q9UQ05 1017 aa7.53□□□□□ -1.2
SGIP1-209ENST00000480548 POLR3KQ9Y2Y1 108 aaPredicted RBP7.53□□□□□ -1.2
SGIP1-209ENST00000480548 SLC12A7Q9Y666 1083 aa7.53□□□□□ -1.2
SGIP1-209ENST00000480548 PLD2O14939 933 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 SUSD5O60279 629 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 PSAPP07602 524 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 TIMP2P16035 220 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 NME2P22392 152 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 RPL6Q02878 288 aaKnown RBP7.52□□□□□ -1.21
SGIP1-209ENST00000480548 FNDC3BQ53EP0 1204 aaKnown RBP7.52□□□□□ -1.21
SGIP1-209ENST00000480548 LLGL2Q6P1M3 1020 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 CNNM4Q6P4Q7 775 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 KSR2Q6VAB6 950 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 DDX46Q7L014 1031 aaKnown RBP7.52□□□□□ -1.21
SGIP1-209ENST00000480548 PRICKLE2Q7Z3G6 844 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 NECAB2Q7Z6G3 386 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 CEP120Q8N960 986 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 ZSCAN1Q8NBB4 408 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 TTC8Q8TAM2 541 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 MTMR8Q96EF0 704 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 TIMMDC1Q9NPL8 285 aa7.52□□□□□ -1.21
SGIP1-209ENST00000480548 DNAJC25-GNG10A0A024R161 153 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 MEIS3P2A8K0S8 358 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 IFRD1O00458 451 aaPredicted RBP7.51□□□□□ -1.21
SGIP1-209ENST00000480548 WDHD1O75717 1129 aaPredicted RBP7.51□□□□□ -1.21
SGIP1-209ENST00000480548 RGS20O76081 388 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 SOX18P35713 384 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 KCNQ4P56696 695 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 PIN1Q13526 163 aaPredicted RBP7.51□□□□□ -1.21
SGIP1-209ENST00000480548 SLC4A10Q6U841 1118 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 STRA8Q7Z7C7 330 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 LRRTM3Q86VH5 581 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 TMEM102Q8N9M5 508 aaPredicted RBP7.51□□□□□ -1.21
SGIP1-209ENST00000480548 TMEM40Q8WWA1 233 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 NXPE3Q969Y0 559 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 GAL3ST3Q96A11 431 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 ARPC5LQ9BPX5 153 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 TSEN34Q9BSV6 310 aaKnown RBP7.51□□□□□ -1.21
SGIP1-209ENST00000480548 GSX2Q9BZM3 304 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 ZNF700Q9H0M5 742 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 ZFATQ9P243 1243 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 SFMBT1Q9UHJ3 866 aa7.51□□□□□ -1.21
SGIP1-209ENST00000480548 SPINT1O43278 529 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 EYA4O95677 639 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 CCNFP41002 786 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 CTSOP43234 321 aaPredicted RBP7.5□□□□□ -1.21
SGIP1-209ENST00000480548 PLAURQ03405 335 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 ITKQ08881 620 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 MTMR1Q13613 665 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 ZRSR2Q15696 482 aaKnown RBP7.5□□□□□ -1.21
SGIP1-209ENST00000480548 FOXB2Q5VYV0 432 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 SULF2Q8IWU5 870 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 TAB3Q8N5C8 712 aaPredicted RBP7.5□□□□□ -1.21
SGIP1-209ENST00000480548 EXOC2Q96KP1 924 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 IPO9Q96P70 1041 aaKnown RBP7.5□□□□□ -1.21
SGIP1-209ENST00000480548 TRERF1Q96PN7 1200 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 PNMA5Q96PV4 448 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 CDC6Q99741 560 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 CDH19Q9H159 772 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 CBX8Q9HC52 389 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.5□□□□□ -1.21
SGIP1-209ENST00000480548 AASDHPPTQ9NRN7 309 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 SLC5A4Q9NY91 659 aa7.5□□□□□ -1.21
SGIP1-209ENST00000480548 TLR7Q9NYK1 1049 aaKnown RBP7.5□□□□□ -1.21
SGIP1-209ENST00000480548 E2F8A0AVK6 867 aa7.49□□□□□ -1.21
SGIP1-209ENST00000480548 AGRPO00253 132 aa7.49□□□□□ -1.21
SGIP1-209ENST00000480548 PDE2AO00408 941 aaPredicted RBP7.49□□□□□ -1.21
SGIP1-209ENST00000480548 STRN3Q13033 797 aa7.49□□□□□ -1.21
SGIP1-209ENST00000480548 ZYXQ15942 572 aaKnown RBP7.49□□□□□ -1.21
SGIP1-209ENST00000480548 FOXD4L6Q3SYB3 417 aaPredicted RBP7.49□□□□□ -1.21
SGIP1-209ENST00000480548 SAMD5Q5TGI4 173 aa7.49□□□□□ -1.21
SGIP1-209ENST00000480548 KIAA1211LQ6NV74 962 aa7.49□□□□□ -1.21
SGIP1-209ENST00000480548 FOXD4L3Q6VB84 417 aaPredicted RBP7.49□□□□□ -1.21
SGIP1-209ENST00000480548 WDR66Q8TBY9 1149 aa7.49□□□□□ -1.21
SGIP1-209ENST00000480548 GRIN3AQ8TCU5 1115 aa7.49□□□□□ -1.21
SGIP1-209ENST00000480548 LEO1Q8WVC0 666 aaPredicted RBP7.49□□□□□ -1.21
SGIP1-209ENST00000480548 KISS1RQ969F8 398 aaPredicted RBP7.49□□□□□ -1.21
SGIP1-209ENST00000480548 CLUHP3Q96NS8 147 aa7.49□□□□□ -1.21
SGIP1-209ENST00000480548 NSUN5Q96P11 429 aaKnown RBP7.49□□□□□ -1.21
SGIP1-209ENST00000480548 DHRS4Q9BTZ2 278 aa7.49□□□□□ -1.21
SGIP1-209ENST00000480548 CRISPLD1Q9H336 500 aa7.49□□□□□ -1.21
SGIP1-209ENST00000480548 PHAXQ9H814 394 aaKnown RBP7.49□□□□□ -1.21
SGIP1-209ENST00000480548 PCDHB10Q9UN67 800 aa7.49□□□□□ -1.21
SGIP1-209ENST00000480548 MRPS23Q9Y3D9 190 aaKnown RBP7.49□□□□□ -1.21
SGIP1-209ENST00000480548 GOLGA6CA6NDK9 693 aa7.48□□□□□ -1.21
SGIP1-209ENST00000480548 GOLGA6BA6NDN3 693 aa7.48□□□□□ -1.21
SGIP1-209ENST00000480548 NFKBIEO00221 500 aa7.48□□□□□ -1.21
SGIP1-209ENST00000480548 FOSP01100 380 aaPredicted RBP7.48□□□□□ -1.21
SGIP1-209ENST00000480548 GOLGA6DP0CG33 693 aa7.48□□□□□ -1.21
SGIP1-209ENST00000480548 ARAFP10398 606 aa7.48□□□□□ -1.21
SGIP1-209ENST00000480548 NFKB1P19838 968 aa7.48□□□□□ -1.21
SGIP1-209ENST00000480548 CDC27P30260 824 aa7.48□□□□□ -1.21
SGIP1-209ENST00000480548 PDE6BP35913 854 aa7.48□□□□□ -1.21
SGIP1-209ENST00000480548 FAM209AQ5JX71 171 aa7.48□□□□□ -1.21
SGIP1-209ENST00000480548 UNC5AQ6ZN44 842 aa7.48□□□□□ -1.21
SGIP1-209ENST00000480548 TEX2Q8IWB9 1127 aa7.48□□□□□ -1.21
SGIP1-209ENST00000480548 PPM1KQ8N3J5 372 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms