RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 A0A0G2JLL6 359 aaPredicted RBP14.17□□□□□ -0.14
CCDC18-208ENST00000479653 FOXO4P98177 505 aa14.17□□□□□ -0.14
CCDC18-208ENST00000479653 WDR43Q15061 677 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCDC18-208ENST00000479653 NOL9Q5SY16 702 aaKnown RBP14.17□□□□□ -0.14
CCDC18-208ENST00000479653 LMBR1LQ6UX01 489 aa14.17□□□□□ -0.14
CCDC18-208ENST00000479653 PRRT2Q7Z6L0 340 aaPredicted RBP14.17□□□□□ -0.14
CCDC18-208ENST00000479653 TSPYL6Q8N831 410 aa14.17□□□□□ -0.14
CCDC18-208ENST00000479653 PICK1Q9NRD5 415 aa14.17□□□□□ -0.14
CCDC18-208ENST00000479653 ALPK3Q96L96 1907 aa14.16□□□□□ -0.14
CCDC18-208ENST00000479653 PLA2G5P39877 138 aa14.16□□□□□ -0.14
CCDC18-208ENST00000479653 CALD1Q05682 793 aaKnown RBP14.16□□□□□ -0.14
CCDC18-208ENST00000479653 LRRC26Q2I0M4 334 aa14.16□□□□□ -0.14
CCDC18-208ENST00000479653 MRIQ9BWK5 157 aa14.16□□□□□ -0.14
CCDC18-208ENST00000479653 SLC45A1Q9Y2W3 748 aa14.16□□□□□ -0.14
CCDC18-208ENST00000479653 ARAP2Q8WZ64 1704 aa14.15□□□□□ -0.14
CCDC18-208ENST00000479653 TMEM265A0A087WTH1 108 aa14.15□□□□□ -0.14
CCDC18-208ENST00000479653 FOSL2P15408 326 aa14.15□□□□□ -0.14
CCDC18-208ENST00000479653 LINS1Q8NG48 757 aa14.15□□□□□ -0.14
CCDC18-208ENST00000479653 AFG3L2Q9Y4W6 797 aa14.15□□□□□ -0.14
CCDC18-208ENST00000479653 MYH3P11055 1940 aa14.15□□□□□ -0.14
CCDC18-208ENST00000479653 RPAP1Q9BWH6 1393 aaPredicted RBP14.14□□□□□ -0.15
CCDC18-208ENST00000479653 TRIM75PA6NK02 468 aa14.14□□□□□ -0.15
CCDC18-208ENST00000479653 PTPRAP18433 802 aa14.14□□□□□ -0.15
CCDC18-208ENST00000479653 CAVIN4Q5BKX8 364 aa14.14□□□□□ -0.15
CCDC18-208ENST00000479653 TJAP1Q5JTD0 557 aa14.14□□□□□ -0.15
CCDC18-208ENST00000479653 SCYL3Q8IZE3 742 aa14.14□□□□□ -0.15
CCDC18-208ENST00000479653 ADAMTS8Q9UP79 889 aa14.14□□□□□ -0.15
CCDC18-208ENST00000479653 MAST3O60307 1309 aa14.14□□□□□ -0.15
CCDC18-208ENST00000479653 COL6A1P12109 1028 aa14.13□□□□□ -0.15
CCDC18-208ENST00000479653 PRKAR2AP13861 404 aaKnown RBP14.13□□□□□ -0.15
CCDC18-208ENST00000479653 CYP2B6P20813 491 aa14.13□□□□□ -0.15
CCDC18-208ENST00000479653 NFIAQ12857 509 aa14.13□□□□□ -0.15
CCDC18-208ENST00000479653 FKBP5Q13451 457 aaPredicted RBP14.13□□□□□ -0.15
CCDC18-208ENST00000479653 FAM110CQ1W6H9 321 aa14.13□□□□□ -0.15
CCDC18-208ENST00000479653 HHIPL2Q6UWX4 724 aa14.13□□□□□ -0.15
CCDC18-208ENST00000479653 FBXO33Q7Z6M2 555 aa14.13□□□□□ -0.15
CCDC18-208ENST00000479653 DNAAF4Q8WXU2 420 aa14.13□□□□□ -0.15
CCDC18-208ENST00000479653 TRIB2Q92519 343 aa14.13□□□□□ -0.15
CCDC18-208ENST00000479653 PUS3Q9BZE2 481 aaKnown RBP14.13□□□□□ -0.15
CCDC18-208ENST00000479653 PRKAG2Q9UGJ0 569 aa14.13□□□□□ -0.15
CCDC18-208ENST00000479653 GJD2Q9UKL4 321 aa14.13□□□□□ -0.15
CCDC18-208ENST00000479653 ABCB7O75027 752 aa14.12□□□□□ -0.15
CCDC18-208ENST00000479653 EPHA10Q5JZY3 1008 aa14.12□□□□□ -0.15
CCDC18-208ENST00000479653 PNMA3Q9UL41 463 aa14.12□□□□□ -0.15
CCDC18-208ENST00000479653 AGTPBP1Q9UPW5 1226 aa14.12□□□□□ -0.15
CCDC18-208ENST00000479653 LRRFIP2Q9Y608 721 aaKnown RBP14.12□□□□□ -0.15
CCDC18-208ENST00000479653 FLIIQ13045 1269 aa14.11□□□□□ -0.15
CCDC18-208ENST00000479653 SHHQ15465 462 aa14.11□□□□□ -0.15
CCDC18-208ENST00000479653 TREML2Q5T2D2 321 aa14.11□□□□□ -0.15
CCDC18-208ENST00000479653 CDC42EP5Q6NZY7 148 aa14.11□□□□□ -0.15
CCDC18-208ENST00000479653 SENP6Q9GZR1 1112 aaPredicted RBP14.11□□□□□ -0.15
CCDC18-208ENST00000479653 CDH23Q9H251 3354 aa14.11□□□□□ -0.15
CCDC18-208ENST00000479653 TTYH1Q9H313 450 aaPredicted RBP14.11□□□□□ -0.15
CCDC18-208ENST00000479653 USP40Q9NVE5 1235 aa14.11□□□□□ -0.15
CCDC18-208ENST00000479653 PHF20L1A8MW92 1017 aa14.1□□□□□ -0.15
CCDC18-208ENST00000479653 RALBP1Q15311 655 aa14.1□□□□□ -0.15
CCDC18-208ENST00000479653 ZFPM1Q8IX07 1006 aa14.1□□□□□ -0.15
CCDC18-208ENST00000479653 FAM198AQ9UFP1 575 aa14.1□□□□□ -0.15
CCDC18-208ENST00000479653 SUGT1Q9Y2Z0 365 aa14.1□□□□□ -0.15
CCDC18-208ENST00000479653 MGAMO43451 1857 aa14.1□□□□□ -0.15
CCDC18-208ENST00000479653 APAF1O14727 1248 aa14.09□□□□□ -0.15
CCDC18-208ENST00000479653 GCLCP48506 637 aaPredicted RBP14.09□□□□□ -0.15
CCDC18-208ENST00000479653 ATN1P54259 1190 aaPredicted RBP14.09□□□□□ -0.15
CCDC18-208ENST00000479653 MAP3K21Q5TCX8 1036 aa14.09□□□□□ -0.15
CCDC18-208ENST00000479653 CCDC84Q86UT8 332 aaPredicted RBP14.09□□□□□ -0.15
CCDC18-208ENST00000479653 ZSCAN29Q8IWY8 852 aaPredicted RBP14.09□□□□□ -0.15
CCDC18-208ENST00000479653 TSR2Q969E8 191 aaKnown RBP14.09□□□□□ -0.15
CCDC18-208ENST00000479653 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.09□□□□□ -0.15
CCDC18-208ENST00000479653 COL2A1P02458 1487 aaPredicted RBP14.09□□□□□ -0.15
CCDC18-208ENST00000479653 DDX60LQ5H9U9 1706 aaKnown RBP14.09□□□□□ -0.15
CCDC18-208ENST00000479653 CACNB2Q08289 660 aaPredicted RBP14.08□□□□□ -0.16
CCDC18-208ENST00000479653 MAP3K12Q12852 859 aa14.08□□□□□ -0.16
CCDC18-208ENST00000479653 DIXDC1Q155Q3 683 aa14.08□□□□□ -0.16
CCDC18-208ENST00000479653 TWISTNBQ3B726 338 aaPredicted RBP14.08□□□□□ -0.16
CCDC18-208ENST00000479653 C9orf50Q5SZB4 431 aa14.08□□□□□ -0.16
CCDC18-208ENST00000479653 LHX8Q68G74 356 aa14.08□□□□□ -0.16
CCDC18-208ENST00000479653 MROH5Q6ZUA9 1318 aa14.08□□□□□ -0.16
CCDC18-208ENST00000479653 CCND3P30281 292 aaPredicted RBP14.07□□□□□ -0.16
CCDC18-208ENST00000479653 SMAD3P84022 425 aaKnown RBP14.07□□□□□ -0.16
CCDC18-208ENST00000479653 METTL24Q5JXM2 366 aa14.07□□□□□ -0.16
CCDC18-208ENST00000479653 NUDT12Q9BQG2 462 aa14.07□□□□□ -0.16
CCDC18-208ENST00000479653 DAGLAQ9Y4D2 1042 aa14.07□□□□□ -0.16
CCDC18-208ENST00000479653 DNAH12Q6ZR08 3092 aa14.07□□□□□ -0.16
CCDC18-208ENST00000479653 CTNND1O60716 968 aaKnown RBP14.06□□□□□ -0.16
CCDC18-208ENST00000479653 SLURP2P0DP57 97 aa14.06□□□□□ -0.16
CCDC18-208ENST00000479653 ZKSCAN1P17029 563 aaPredicted RBP14.06□□□□□ -0.16
CCDC18-208ENST00000479653 PABPC4Q13310 644 aaKnown RBP eCLIP14.06□□□□□ -0.16
CCDC18-208ENST00000479653 PPM1EQ8WY54 764 aa14.06□□□□□ -0.16
CCDC18-208ENST00000479653 C9orf78Q9NZ63 289 aaPredicted RBP14.06□□□□□ -0.16
CCDC18-208ENST00000479653 F6X3S4 739 aa14.05□□□□□ -0.16
CCDC18-208ENST00000479653 MYCNP04198 464 aaPredicted RBP14.05□□□□□ -0.16
CCDC18-208ENST00000479653 RGS3P49796 1198 aa14.05□□□□□ -0.16
CCDC18-208ENST00000479653 SPP2Q13103 211 aa14.05□□□□□ -0.16
CCDC18-208ENST00000479653 CCAR1Q8IX12 1150 aaKnown RBP14.05□□□□□ -0.16
CCDC18-208ENST00000479653 TRMT44Q8IYL2 757 aaKnown RBP14.05□□□□□ -0.16
CCDC18-208ENST00000479653 USP38Q8NB14 1042 aa14.05□□□□□ -0.16
CCDC18-208ENST00000479653 PROCA1Q8NCQ7 364 aaPredicted RBP14.05□□□□□ -0.16
CCDC18-208ENST00000479653 WDR66Q8TBY9 1149 aa14.05□□□□□ -0.16
CCDC18-208ENST00000479653 ASCC2Q9H1I8 757 aaPredicted RBP14.05□□□□□ -0.16
CCDC18-208ENST00000479653 PRDM5Q9NQX1 630 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms