RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 SURF6O75683 361 aaKnown RBP17.62■□□□□ 0.41
ATG4B-218ENST00000479554 MCAMP43121 646 aa17.62■□□□□ 0.41
ATG4B-218ENST00000479554 PICALMQ13492 652 aa17.62■□□□□ 0.41
ATG4B-218ENST00000479554 TNNI3KQ59H18 835 aa17.62■□□□□ 0.41
ATG4B-218ENST00000479554 TBC1D9Q6ZT07 1266 aa17.62■□□□□ 0.41
ATG4B-218ENST00000479554 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.62■□□□□ 0.41
ATG4B-218ENST00000479554 RAI14Q9P0K7 980 aa17.62■□□□□ 0.41
ATG4B-218ENST00000479554 FPGT-TNNI3KV9GXZ4 949 aa17.62■□□□□ 0.41
ATG4B-218ENST00000479554 MAST2Q6P0Q8 1798 aa17.61■□□□□ 0.41
ATG4B-218ENST00000479554 GPR75-ASB3A0A0A6YYF3 556 aa17.61■□□□□ 0.41
ATG4B-218ENST00000479554 ZBTB7BO15156 539 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-218ENST00000479554 LDHCP07864 332 aa17.61■□□□□ 0.41
ATG4B-218ENST00000479554 ARHGEF6Q15052 776 aa17.61■□□□□ 0.41
ATG4B-218ENST00000479554 TTC39AQ5SRH9 613 aa17.61■□□□□ 0.41
ATG4B-218ENST00000479554 ZNF384Q8TF68 577 aa17.61■□□□□ 0.41
ATG4B-218ENST00000479554 NSUN4Q96CB9 384 aaKnown RBP17.61■□□□□ 0.41
ATG4B-218ENST00000479554 DDX4Q9NQI0 724 aaKnown RBP17.61■□□□□ 0.41
ATG4B-218ENST00000479554 PTPN22Q9Y2R2 807 aa17.61■□□□□ 0.41
ATG4B-218ENST00000479554 DDTLA6NHG4 134 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-218ENST00000479554 TLR2O60603 784 aa17.6■□□□□ 0.41
ATG4B-218ENST00000479554 RHBDL3P58872 404 aa17.6■□□□□ 0.41
ATG4B-218ENST00000479554 CCDC158Q5M9N0 1113 aa17.6■□□□□ 0.41
ATG4B-218ENST00000479554 SH3BP5LQ7L8J4 393 aa17.6■□□□□ 0.41
ATG4B-218ENST00000479554 DBNDD2Q9BQY9 259 aa17.6■□□□□ 0.41
ATG4B-218ENST00000479554 LRP2BPQ9P2M1 347 aa17.6■□□□□ 0.41
ATG4B-218ENST00000479554 KCNH4Q9UQ05 1017 aa17.6■□□□□ 0.41
ATG4B-218ENST00000479554 PHF20L1A8MW92 1017 aa17.59■□□□□ 0.41
ATG4B-218ENST00000479554 MAP4K4O95819 1239 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-218ENST00000479554 SCYL3Q8IZE3 742 aa17.59■□□□□ 0.41
ATG4B-218ENST00000479554 PICK1Q9NRD5 415 aa17.59■□□□□ 0.41
ATG4B-218ENST00000479554 NOP58Q9Y2X3 529 aaKnown RBP17.59■□□□□ 0.41
ATG4B-218ENST00000479554 CAP1Q01518 475 aa17.58■□□□□ 0.4
ATG4B-218ENST00000479554 CEP85Q6P2H3 762 aa17.58■□□□□ 0.4
ATG4B-218ENST00000479554 ANKRD23Q86SG2 305 aa17.58■□□□□ 0.4
ATG4B-218ENST00000479554 PANK1Q8TE04 598 aa17.58■□□□□ 0.4
ATG4B-218ENST00000479554 NOL10Q9BSC4 688 aaKnown RBP17.58■□□□□ 0.4
ATG4B-218ENST00000479554 SNRKQ9NRH2 765 aa17.58■□□□□ 0.4
ATG4B-218ENST00000479554 DOCK1Q14185 1865 aa17.57■□□□□ 0.4
ATG4B-218ENST00000479554 PDHXO00330 501 aa17.57■□□□□ 0.4
ATG4B-218ENST00000479554 NPM3O75607 178 aaKnown RBP17.57■□□□□ 0.4
ATG4B-218ENST00000479554 MAP3K10Q02779 954 aa17.57■□□□□ 0.4
ATG4B-218ENST00000479554 KIF22Q14807 665 aa17.57■□□□□ 0.4
ATG4B-218ENST00000479554 COL2A1P02458 1487 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-218ENST00000479554 CXCL11O14625 94 aa17.56■□□□□ 0.4
ATG4B-218ENST00000479554 SLURP2P0DP57 97 aa17.56■□□□□ 0.4
ATG4B-218ENST00000479554 MS4A1P11836 297 aa17.56■□□□□ 0.4
ATG4B-218ENST00000479554 PTPRAP18433 802 aa17.56■□□□□ 0.4
ATG4B-218ENST00000479554 NAA16Q6N069 864 aaPredicted RBP17.56■□□□□ 0.4
ATG4B-218ENST00000479554 TEX11Q8IYF3 940 aa17.56■□□□□ 0.4
ATG4B-218ENST00000479554 DBNLQ9UJU6 430 aaKnown RBP17.56■□□□□ 0.4
ATG4B-218ENST00000479554 CTNND1O60716 968 aaKnown RBP17.55■□□□□ 0.4
ATG4B-218ENST00000479554 CYP2E1P05181 493 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-218ENST00000479554 LACTBP83111 547 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-218ENST00000479554 MOGSQ13724 837 aa17.55■□□□□ 0.4
ATG4B-218ENST00000479554 ARMC5Q96C12 935 aa17.55■□□□□ 0.4
ATG4B-218ENST00000479554 ZNF512BQ96KM6 892 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-218ENST00000479554 OSBPL5Q9H0X9 879 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-218ENST00000479554 TLR7Q9NYK1 1049 aaKnown RBP17.55■□□□□ 0.4
ATG4B-218ENST00000479554 ZHX2Q9Y6X8 837 aa17.55■□□□□ 0.4
ATG4B-218ENST00000479554 ZSWIM8A7E2V4 1837 aa17.54■□□□□ 0.4
ATG4B-218ENST00000479554 TBC1D12O60347 775 aa17.54■□□□□ 0.4
ATG4B-218ENST00000479554 BAG3O95817 575 aa17.54■□□□□ 0.4
ATG4B-218ENST00000479554 ERC1Q8IUD2 1116 aa17.54■□□□□ 0.4
ATG4B-218ENST00000479554 SH3RF3Q8TEJ3 882 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-218ENST00000479554 PARK7Q99497 189 aaKnown RBP17.54■□□□□ 0.4
ATG4B-218ENST00000479554 ARHGAP39Q9C0H5 1083 aa17.54■□□□□ 0.4
ATG4B-218ENST00000479554 CCDC8Q9H0W5 538 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-218ENST00000479554 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.54■□□□□ 0.4
ATG4B-218ENST00000479554 AATFQ9NY61 560 aaKnown RBP eCLIP17.54■□□□□ 0.4
ATG4B-218ENST00000479554 CPA4Q9UI42 421 aa17.54■□□□□ 0.4
ATG4B-218ENST00000479554 EXOC6BQ9Y2D4 811 aa17.54■□□□□ 0.4
ATG4B-218ENST00000479554 PTCH2Q9Y6C5 1203 aa17.54■□□□□ 0.4
ATG4B-218ENST00000479554 BRCA2P51587 3418 aa17.53■□□□□ 0.4
ATG4B-218ENST00000479554 ADGRA2Q96PE1 1338 aa17.53■□□□□ 0.4
ATG4B-218ENST00000479554 A0A0G2JLL6 359 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-218ENST00000479554 FAM196BA6NMK8 535 aa17.53■□□□□ 0.4
ATG4B-218ENST00000479554 PLCG2P16885 1265 aa17.53■□□□□ 0.4
ATG4B-218ENST00000479554 ZAP70P43403 619 aa17.53■□□□□ 0.4
ATG4B-218ENST00000479554 SLC9C1Q4G0N8 1177 aa17.53■□□□□ 0.4
ATG4B-218ENST00000479554 C17orf99Q6UX52 265 aa17.53■□□□□ 0.4
ATG4B-218ENST00000479554 FASTKD5Q7L8L6 764 aaKnown RBP17.53■□□□□ 0.4
ATG4B-218ENST00000479554 PRRT2Q7Z6L0 340 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-218ENST00000479554 EAF2Q96CJ1 260 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-218ENST00000479554 AFG3L2Q9Y4W6 797 aa17.53■□□□□ 0.4
ATG4B-218ENST00000479554 RBBP6Q7Z6E9 1792 aaKnown RBP17.53■□□□□ 0.4
ATG4B-218ENST00000479554 IGSF3O75054 1194 aa17.52■□□□□ 0.4
ATG4B-218ENST00000479554 GNRH1P01148 92 aa17.52■□□□□ 0.4
ATG4B-218ENST00000479554 GPAT2Q6NUI2 795 aa17.52■□□□□ 0.4
ATG4B-218ENST00000479554 GADL1Q6ZQY3 521 aa17.52■□□□□ 0.4
ATG4B-218ENST00000479554 PIH1D3Q9NQM4 214 aaKnown RBP17.52■□□□□ 0.4
ATG4B-218ENST00000479554 PHIPQ8WWQ0 1821 aa17.51■□□□□ 0.39
ATG4B-218ENST00000479554 POTEFA5A3E0 1075 aa17.51■□□□□ 0.39
ATG4B-218ENST00000479554 TRIM75PA6NK02 468 aa17.51■□□□□ 0.39
ATG4B-218ENST00000479554 HSP90AB4PQ58FF6 505 aa17.51■□□□□ 0.39
ATG4B-218ENST00000479554 ADGRA1Q86SQ6 560 aa17.51■□□□□ 0.39
ATG4B-218ENST00000479554 NBPF11Q86T75 865 aa17.51■□□□□ 0.39
ATG4B-218ENST00000479554 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-218ENST00000479554 GTF3C3Q9Y5Q9 886 aa17.51■□□□□ 0.39
ATG4B-218ENST00000479554 MKI67P46013 3256 aaKnown RBP17.51■□□□□ 0.39
ATG4B-218ENST00000479554 PTPRFP10586 1907 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms