RNA–Protein interactions for RNA: ENST00000478082.5

PLOD3-212, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 1,585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-212ENST00000478082 MAP3K11Q16584 847 aa22.65■■□□□ 1.22
PLOD3-212ENST00000478082 LDLRAD1Q5T700 205 aa22.65■■□□□ 1.22
PLOD3-212ENST00000478082 RIOK1Q9BRS2 568 aaKnown RBP22.65■■□□□ 1.22
PLOD3-212ENST00000478082 NOL10Q9BSC4 688 aaKnown RBP22.65■■□□□ 1.22
PLOD3-212ENST00000478082 PPP1R12BO60237 982 aaPredicted RBP22.64■■□□□ 1.22
PLOD3-212ENST00000478082 ENTPD3O75355 529 aa22.64■■□□□ 1.22
PLOD3-212ENST00000478082 RASAL3Q86YV0 1011 aa22.64■■□□□ 1.22
PLOD3-212ENST00000478082 MAPKAPK5Q8IW41 473 aa22.64■■□□□ 1.22
PLOD3-212ENST00000478082 TGFBRAP1Q8WUH2 860 aa22.64■■□□□ 1.22
PLOD3-212ENST00000478082 ATRNL1Q5VV63 1379 aa22.64■■□□□ 1.21
PLOD3-212ENST00000478082 IGSF3O75054 1194 aa22.63■■□□□ 1.21
PLOD3-212ENST00000478082 GLRX3O76003 335 aaKnown RBP22.63■■□□□ 1.21
PLOD3-212ENST00000478082 STAP2Q9UGK3 403 aa22.63■■□□□ 1.21
PLOD3-212ENST00000478082 THSD7BQ9C0I4 1608 aa22.63■■□□□ 1.21
PLOD3-212ENST00000478082 AK9Q5TCS8 1911 aa22.63■■□□□ 1.21
PLOD3-212ENST00000478082 SLC10A3P09131 477 aa22.63■■□□□ 1.21
PLOD3-212ENST00000478082 ECE1P42892 770 aa22.63■■□□□ 1.21
PLOD3-212ENST00000478082 ZSCAN29Q8IWY8 852 aaPredicted RBP22.63■■□□□ 1.21
PLOD3-212ENST00000478082 OSBPL5Q9H0X9 879 aaPredicted RBP22.63■■□□□ 1.21
PLOD3-212ENST00000478082 FLT1P17948 1338 aa22.62■■□□□ 1.21
PLOD3-212ENST00000478082 ERC2O15083 957 aa22.62■■□□□ 1.21
PLOD3-212ENST00000478082 MKRN3Q13064 507 aaKnown RBP22.62■■□□□ 1.21
PLOD3-212ENST00000478082 LCORLQ8N3X6 602 aa22.62■■□□□ 1.21
PLOD3-212ENST00000478082 KBTBD3Q8NAB2 608 aa22.62■■□□□ 1.21
PLOD3-212ENST00000478082 CSRNP1Q96S65 589 aa22.62■■□□□ 1.21
PLOD3-212ENST00000478082 FOCADQ5VW36 1801 aa22.62■■□□□ 1.21
PLOD3-212ENST00000478082 MYH7P12883 1935 aa22.62■■□□□ 1.21
PLOD3-212ENST00000478082 MAGEB6P1A0A0J9YX57 407 aa22.61■■□□□ 1.21
PLOD3-212ENST00000478082 PDE4AP27815 886 aa22.61■■□□□ 1.21
PLOD3-212ENST00000478082 IREB2P48200 963 aaKnown RBP22.61■■□□□ 1.21
PLOD3-212ENST00000478082 SLC4A8Q2Y0W8 1093 aa22.61■■□□□ 1.21
PLOD3-212ENST00000478082 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.61■■□□□ 1.21
PLOD3-212ENST00000478082 PLEKHM2Q8IWE5 1019 aa22.61■■□□□ 1.21
PLOD3-212ENST00000478082 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.61■■□□□ 1.21
PLOD3-212ENST00000478082 FAM196BA6NMK8 535 aa22.6■■□□□ 1.21
PLOD3-212ENST00000478082 PLCG2P16885 1265 aa22.6■■□□□ 1.21
PLOD3-212ENST00000478082 ARMT1Q9H993 441 aa22.6■■□□□ 1.21
PLOD3-212ENST00000478082 NPM3O75607 178 aaKnown RBP22.59■■□□□ 1.21
PLOD3-212ENST00000478082 WRNIP1Q96S55 665 aa22.59■■□□□ 1.21
PLOD3-212ENST00000478082 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.59■■□□□ 1.216e-6■■■□□ 19.2
PLOD3-212ENST00000478082 PUS7LQ9H0K6 701 aaKnown RBP22.59■■□□□ 1.21
PLOD3-212ENST00000478082 SAP30BPQ9UHR5 308 aaKnown RBP22.59■■□□□ 1.21
PLOD3-212ENST00000478082 INPP5BP32019 993 aa22.59■■□□□ 1.21
PLOD3-212ENST00000478082 VGLL4Q14135 290 aa22.59■■□□□ 1.21
PLOD3-212ENST00000478082 UBE3CQ15386 1083 aa22.59■■□□□ 1.21
PLOD3-212ENST00000478082 CNKSR2Q8WXI2 1034 aa22.59■■□□□ 1.21
PLOD3-212ENST00000478082 ZKSCAN4Q969J2 545 aaPredicted RBP22.59■■□□□ 1.21
PLOD3-212ENST00000478082 ELP3Q9H9T3 547 aa22.59■■□□□ 1.21
PLOD3-212ENST00000478082 SIPA1L1O43166 1804 aa22.58■■□□□ 1.21
PLOD3-212ENST00000478082 PRKAB2O43741 272 aa22.58■■□□□ 1.2
PLOD3-212ENST00000478082 MBD4O95243 580 aa22.58■■□□□ 1.2
PLOD3-212ENST00000478082 GJA5P36382 358 aa22.58■■□□□ 1.2
PLOD3-212ENST00000478082 ANKRD13AQ8IZ07 590 aa22.58■■□□□ 1.2
PLOD3-212ENST00000478082 CCDC102AQ96A19 550 aa22.58■■□□□ 1.2
PLOD3-212ENST00000478082 PALD1Q9ULE6 856 aa22.58■■□□□ 1.2
PLOD3-212ENST00000478082 CENPBP07199 599 aaPredicted RBP22.57■■□□□ 1.2
PLOD3-212ENST00000478082 MAP3K9P80192 1104 aa22.57■■□□□ 1.2
PLOD3-212ENST00000478082 EVX2Q03828 476 aa22.57■■□□□ 1.2
PLOD3-212ENST00000478082 DCAF15Q66K64 600 aa22.57■■□□□ 1.2
PLOD3-212ENST00000478082 SDR42E1Q8WUS8 393 aa22.57■■□□□ 1.2
PLOD3-212ENST00000478082 ZNF341Q9BYN7 854 aa22.57■■□□□ 1.2
PLOD3-212ENST00000478082 USP5P45974 858 aa22.56■■□□□ 1.2
PLOD3-212ENST00000478082 KIF23Q02241 960 aaPredicted RBP22.56■■□□□ 1.2
PLOD3-212ENST00000478082 NOGQ13253 232 aa22.56■■□□□ 1.2
PLOD3-212ENST00000478082 TMED8Q6PL24 325 aaPredicted RBP22.56■■□□□ 1.2
PLOD3-212ENST00000478082 OSBP2Q969R2 916 aa22.56■■□□□ 1.2
PLOD3-212ENST00000478082 SLC10A4Q96EP9 437 aa22.56■■□□□ 1.2
PLOD3-212ENST00000478082 FSD1Q9BTV5 496 aa22.56■■□□□ 1.2
PLOD3-212ENST00000478082 COL2A1P02458 1487 aaPredicted RBP22.56■■□□□ 1.2
PLOD3-212ENST00000478082 PHF20L1A8MW92 1017 aa22.55■■□□□ 1.2
PLOD3-212ENST00000478082 RNF113AO15541 343 aaKnown RBP22.55■■□□□ 1.2
PLOD3-212ENST00000478082 SNCAIPQ9Y6H5 919 aa22.55■■□□□ 1.2
PLOD3-212ENST00000478082 DDX60LQ5H9U9 1706 aaKnown RBP22.55■■□□□ 1.2
PLOD3-212ENST00000478082 HSPA1AP0DMV8 641 aaKnown RBP22.55■■□□□ 1.2
PLOD3-212ENST00000478082 HSPA1BP0DMV9 641 aaKnown RBP22.55■■□□□ 1.2
PLOD3-212ENST00000478082 MAP2K2P36507 400 aa22.55■■□□□ 1.2
PLOD3-212ENST00000478082 SPRYD7Q5W111 196 aa22.55■■□□□ 1.2
PLOD3-212ENST00000478082 ZSCAN25Q6NSZ9 544 aa22.55■■□□□ 1.2
PLOD3-212ENST00000478082 SKAP1Q86WV1 359 aa22.55■■□□□ 1.2
PLOD3-212ENST00000478082 HOOK2Q96ED9 719 aa22.55■■□□□ 1.2
PLOD3-212ENST00000478082 WNK4Q96J92 1243 aa22.55■■□□□ 1.2
PLOD3-212ENST00000478082 SEC62Q99442 399 aaKnown RBP22.55■■□□□ 1.2
PLOD3-212ENST00000478082 ZNF112Q9UJU3 913 aa22.55■■□□□ 1.2
PLOD3-212ENST00000478082 M0R2C6 588 aa22.54■■□□□ 1.2
PLOD3-212ENST00000478082 MAP3K10Q02779 954 aa22.54■■□□□ 1.2
PLOD3-212ENST00000478082 OPTNQ96CV9 577 aa22.54■■□□□ 1.2
PLOD3-212ENST00000478082 OSBPL3Q9H4L5 887 aa22.54■■□□□ 1.2
PLOD3-212ENST00000478082 DNAJC18Q9H819 358 aa22.54■■□□□ 1.2
PLOD3-212ENST00000478082 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.54■■□□□ 1.2
PLOD3-212ENST00000478082 RRP1BQ14684 758 aaKnown RBP22.53■■□□□ 1.2
PLOD3-212ENST00000478082 APPBP2Q92624 585 aa22.53■■□□□ 1.2
PLOD3-212ENST00000478082 CRNKL1Q9BZJ0 848 aaKnown RBP22.53■■□□□ 1.2
PLOD3-212ENST00000478082 WBP1LQ9NX94 342 aa22.53■■□□□ 1.2
PLOD3-212ENST00000478082 CSADQ9Y600 493 aa22.53■■□□□ 1.2
PLOD3-212ENST00000478082 NAV1Q8NEY1 1877 aa22.53■■□□□ 1.2
PLOD3-212ENST00000478082 MYH1P12882 1939 aa22.52■■□□□ 1.2
PLOD3-212ENST00000478082 CERS3Q8IU89 383 aa22.52■■□□□ 1.2
PLOD3-212ENST00000478082 EVI5LQ96CN4 794 aa22.52■■□□□ 1.2
PLOD3-212ENST00000478082 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.52■■□□□ 1.2
PLOD3-212ENST00000478082 SMIM22K7EJ46 135 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms