RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 COG6Q9Y2V7 657 aa10.22□□□□□ -0.77
ERCC8-205ENST00000477893 DAGLAQ9Y4D2 1042 aa10.22□□□□□ -0.77
ERCC8-205ENST00000477893 APBB1O00213 710 aa10.21□□□□□ -0.77
ERCC8-205ENST00000477893 CA12O43570 354 aa10.21□□□□□ -0.77
ERCC8-205ENST00000477893 IREB2P48200 963 aaKnown RBP10.21□□□□□ -0.77
ERCC8-205ENST00000477893 ATP8B2P98198 1209 aa10.21□□□□□ -0.77
ERCC8-205ENST00000477893 TCP10Q12799 353 aa10.21□□□□□ -0.77
ERCC8-205ENST00000477893 APOBEC3HQ6NTF7 200 aaKnown RBP10.21□□□□□ -0.77
ERCC8-205ENST00000477893 CEP85Q6P2H3 762 aa10.21□□□□□ -0.77
ERCC8-205ENST00000477893 SLC10A4Q96EP9 437 aa10.21□□□□□ -0.77
ERCC8-205ENST00000477893 ZDHHC15Q96MV8 337 aa10.21□□□□□ -0.77
ERCC8-205ENST00000477893 RNF186Q9NXI6 227 aa10.21□□□□□ -0.77
ERCC8-205ENST00000477893 EXOC6BQ9Y2D4 811 aa10.21□□□□□ -0.77
ERCC8-205ENST00000477893 C2orf72A6NCS6 295 aa10.2□□□□□ -0.78
ERCC8-205ENST00000477893 SEMA3EO15041 775 aa10.2□□□□□ -0.78
ERCC8-205ENST00000477893 USP2O75604 605 aaPredicted RBP10.2□□□□□ -0.78
ERCC8-205ENST00000477893 HDLBPQ00341 1268 aaKnown RBP10.2□□□□□ -0.78
ERCC8-205ENST00000477893 TTC39AQ5SRH9 613 aa10.2□□□□□ -0.78
ERCC8-205ENST00000477893 HHIPL2Q6UWX4 724 aa10.2□□□□□ -0.78
ERCC8-205ENST00000477893 TBC1D9Q6ZT07 1266 aa10.2□□□□□ -0.78
ERCC8-205ENST00000477893 SSH3Q8TE77 659 aa10.2□□□□□ -0.78
ERCC8-205ENST00000477893 RNF25Q96BH1 459 aaPredicted RBP10.2□□□□□ -0.78
ERCC8-205ENST00000477893 TEPSINQ96N21 525 aa10.2□□□□□ -0.78
ERCC8-205ENST00000477893 DBNDD2Q9BQY9 259 aa10.2□□□□□ -0.78
ERCC8-205ENST00000477893 SNRKQ9NRH2 765 aa10.2□□□□□ -0.78
ERCC8-205ENST00000477893 USP40Q9NVE5 1235 aa10.2□□□□□ -0.78
ERCC8-205ENST00000477893 TLR7Q9NYK1 1049 aaKnown RBP10.2□□□□□ -0.78
ERCC8-205ENST00000477893 SUGT1Q9Y2Z0 365 aa10.2□□□□□ -0.78
ERCC8-205ENST00000477893 TBC1D8O95759 1140 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 NFIAQ12857 509 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 PICALMQ13492 652 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 TNNI3KQ59H18 835 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 LDLRAD1Q5T700 205 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 C20orf194Q5TEA3 1177 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 SPRYD7Q5W111 196 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 CDC42EP5Q6NZY7 148 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 MIGA2Q7L4E1 593 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 ZGPATQ8N5A5 531 aaKnown RBP10.19□□□□□ -0.78
ERCC8-205ENST00000477893 SPATA5Q8NB90 893 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 WNK4Q96J92 1243 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 CCDC8Q9H0W5 538 aaPredicted RBP10.19□□□□□ -0.78
ERCC8-205ENST00000477893 RAI14Q9P0K7 980 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 HMG20BQ9P0W2 317 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 PCDHGA4Q9Y5G9 962 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 FPGT-TNNI3KV9GXZ4 949 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 OTOFQ9HC10 1997 aa10.19□□□□□ -0.78
ERCC8-205ENST00000477893 SALL1Q9NSC2 1324 aa10.18□□□□□ -0.78
ERCC8-205ENST00000477893 MS4A1P11836 297 aa10.18□□□□□ -0.78
ERCC8-205ENST00000477893 GJA5P36382 358 aa10.18□□□□□ -0.78
ERCC8-205ENST00000477893 MCAMP43121 646 aa10.18□□□□□ -0.78
ERCC8-205ENST00000477893 BTDP43251 543 aa10.18□□□□□ -0.78
ERCC8-205ENST00000477893 MECOMQ03112 1051 aa10.18□□□□□ -0.78
ERCC8-205ENST00000477893 SREBF2Q12772 1141 aa10.18□□□□□ -0.78
ERCC8-205ENST00000477893 VGLL4Q14135 290 aa10.18□□□□□ -0.78
ERCC8-205ENST00000477893 ERICH6Q7L0X2 663 aa10.18□□□□□ -0.78
ERCC8-205ENST00000477893 ANKRD13AQ8IZ07 590 aa10.18□□□□□ -0.78
ERCC8-205ENST00000477893 WRNIP1Q96S55 665 aa10.18□□□□□ -0.78
ERCC8-205ENST00000477893 SAGE1Q9NXZ1 904 aa10.18□□□□□ -0.78
ERCC8-205ENST00000477893 MROH7-TTC4A0A0A0MT08 1334 aa10.17□□□□□ -0.78
ERCC8-205ENST00000477893 ARHGAP33O14559 1287 aa10.17□□□□□ -0.78
ERCC8-205ENST00000477893 UQCRFS1P1P0C7P4 283 aa10.17□□□□□ -0.78
ERCC8-205ENST00000477893 ARID4AP29374 1257 aaPredicted RBP10.17□□□□□ -0.78
ERCC8-205ENST00000477893 DGKZQ13574 1117 aa10.17□□□□□ -0.78
ERCC8-205ENST00000477893 MAP3K11Q16584 847 aa10.17□□□□□ -0.78
ERCC8-205ENST00000477893 CCDC158Q5M9N0 1113 aa10.17□□□□□ -0.78
ERCC8-205ENST00000477893 SPTY2D1Q68D10 685 aaPredicted RBP10.17□□□□□ -0.78
ERCC8-205ENST00000477893 ZSCAN29Q8IWY8 852 aaPredicted RBP10.17□□□□□ -0.78
ERCC8-205ENST00000477893 ZFPM1Q8IX07 1006 aa10.17□□□□□ -0.78
ERCC8-205ENST00000477893 ZKSCAN4Q969J2 545 aaPredicted RBP10.17□□□□□ -0.78
ERCC8-205ENST00000477893 OPTNQ96CV9 577 aa10.17□□□□□ -0.78
ERCC8-205ENST00000477893 IL1RAPL2Q9NP60 686 aa10.17□□□□□ -0.78
ERCC8-205ENST00000477893 LRP2BPQ9P2M1 347 aa10.17□□□□□ -0.78
ERCC8-205ENST00000477893 DDX19BQ9UMR2 479 aa10.17□□□□□ -0.78
ERCC8-205ENST00000477893 CSADQ9Y600 493 aa10.17□□□□□ -0.78
ERCC8-205ENST00000477893 NDUFB9Q9Y6M9 179 aa10.17□□□□□ -0.78
ERCC8-205ENST00000477893 CASP8AP2Q9UKL3 1982 aa10.16□□□□□ -0.78
ERCC8-205ENST00000477893 RGS3P49796 1198 aa10.16□□□□□ -0.78
ERCC8-205ENST00000477893 MAP3K9P80192 1104 aa10.16□□□□□ -0.78
ERCC8-205ENST00000477893 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.16□□□□□ -0.78
ERCC8-205ENST00000477893 FAM83AQ86UY5 434 aa10.16□□□□□ -0.78
ERCC8-205ENST00000477893 AACSQ86V21 672 aa10.16□□□□□ -0.78
ERCC8-205ENST00000477893 FBXO22Q8NEZ5 403 aa10.16□□□□□ -0.78
ERCC8-205ENST00000477893 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.16□□□□□ -0.78
ERCC8-205ENST00000477893 ABHD8Q96I13 439 aa10.16□□□□□ -0.78
ERCC8-205ENST00000477893 MRIQ9BWK5 157 aa10.16□□□□□ -0.78
ERCC8-205ENST00000477893 MCOLN1Q9GZU1 580 aa10.16□□□□□ -0.78
ERCC8-205ENST00000477893 FAM198AQ9UFP1 575 aa10.16□□□□□ -0.78
ERCC8-205ENST00000477893 DBNLQ9UJU6 430 aaKnown RBP10.16□□□□□ -0.78
ERCC8-205ENST00000477893 AKAP11Q9UKA4 1901 aa10.15□□□□□ -0.78
ERCC8-205ENST00000477893 GAKO14976 1311 aa10.15□□□□□ -0.78
ERCC8-205ENST00000477893 PDS5AQ29RF7 1337 aaKnown RBP10.15□□□□□ -0.78
ERCC8-205ENST00000477893 MANSC4A6NHS7 340 aaPredicted RBP10.15□□□□□ -0.78
ERCC8-205ENST00000477893 CCDC85CA6NKD9 419 aa10.15□□□□□ -0.78
ERCC8-205ENST00000477893 IGF2BP3O00425 579 aaKnown RBP eCLIP10.15□□□□□ -0.78
ERCC8-205ENST00000477893 SLURP2P0DP57 97 aa10.15□□□□□ -0.78
ERCC8-205ENST00000477893 ZBTB48P10074 688 aaPredicted RBP10.15□□□□□ -0.78
ERCC8-205ENST00000477893 INPP5BP32019 993 aa10.15□□□□□ -0.78
ERCC8-205ENST00000477893 ZAP70P43403 619 aa10.15□□□□□ -0.78
ERCC8-205ENST00000477893 FKBP1CQ5VVH2 108 aa10.15□□□□□ -0.78
ERCC8-205ENST00000477893 DCAF15Q66K64 600 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms