RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 ANO6Q4KMQ2 910 aa12.84□□□□□ -0.35
HLA-DMB-260ENST00000477537 SASS6Q6UVJ0 657 aa12.84□□□□□ -0.35
HLA-DMB-260ENST00000477537 TPTE2Q6XPS3 522 aa12.84□□□□□ -0.35
HLA-DMB-260ENST00000477537 FBXO33Q7Z6M2 555 aa12.84□□□□□ -0.35
HLA-DMB-260ENST00000477537 FSIP1Q8NA03 581 aa12.84□□□□□ -0.35
HLA-DMB-260ENST00000477537 SDR42E1Q8WUS8 393 aa12.84□□□□□ -0.35
HLA-DMB-260ENST00000477537 PHKBQ93100 1093 aa12.84□□□□□ -0.35
HLA-DMB-260ENST00000477537 AIFM3Q96NN9 605 aa12.84□□□□□ -0.35
HLA-DMB-260ENST00000477537 MYH13Q9UKX3 1938 aa12.84□□□□□ -0.35
HLA-DMB-260ENST00000477537 CLIC4Q9Y696 253 aa12.84□□□□□ -0.35
HLA-DMB-260ENST00000477537 EN1Q05925 392 aaPredicted RBP12.83□□□□□ -0.36
HLA-DMB-260ENST00000477537 STK38Q15208 465 aa12.83□□□□□ -0.36
HLA-DMB-260ENST00000477537 MYSM1Q5VVJ2 828 aa12.83□□□□□ -0.36
HLA-DMB-260ENST00000477537 SYNE3Q6ZMZ3 975 aa12.83□□□□□ -0.36
HLA-DMB-260ENST00000477537 DEFB132Q7Z7B7 95 aa12.83□□□□□ -0.36
HLA-DMB-260ENST00000477537 ZKSCAN3Q9BRR0 538 aa12.83□□□□□ -0.36
HLA-DMB-260ENST00000477537 RNF41Q9H4P4 317 aaPredicted RBP12.83□□□□□ -0.36
HLA-DMB-260ENST00000477537 FAM217BQ9NTX9 383 aaPredicted RBP12.83□□□□□ -0.36
HLA-DMB-260ENST00000477537 TAOK2Q9UL54 1235 aa12.83□□□□□ -0.36
HLA-DMB-260ENST00000477537 PCDHA7Q9UN72 937 aa12.83□□□□□ -0.36
HLA-DMB-260ENST00000477537 MINDY4BA8MYZ0 360 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 IARSP41252 1262 aaKnown RBP12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 DYNLL1P63167 89 aaKnown RBP12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 SF3A1Q15459 793 aaKnown RBP12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 NTRK3Q16288 839 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 ILDR2Q71H61 639 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 LINC00301Q8NCQ3 95 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 RGS22Q8NE09 1264 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 ANKRD2Q9GZV1 360 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 CBX8Q9HC52 389 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 SEMA3EO15041 775 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 NPHP1O15259 732 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 CTAGE5O15320 804 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 AP5Z1O43299 807 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 RANBP6O60518 1105 aaKnown RBP12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 KINO60870 393 aaKnown RBP12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 FAM160A1Q05DH4 1040 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 SNW1Q13573 536 aaKnown RBP12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 WTAPQ15007 396 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 TXNRD1Q16881 649 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 KRT40Q6A162 431 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 LUZP1Q86V48 1076 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 MPNDQ8N594 471 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 RIOK1Q9BRS2 568 aaKnown RBP12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 POLR3EQ9NVU0 708 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 TFCP2L1Q9NZI6 479 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 SRCAPQ6ZRS2 3230 aa12.82□□□□□ -0.36
HLA-DMB-260ENST00000477537 BAZ2AQ9UIF9 1905 aaKnown RBP12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 ERICH2A1L162 156 aa12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 ZNF500O60304 480 aaPredicted RBP12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 YEATS4O95619 227 aa12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 HIBADHP31937 336 aaKnown RBP12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 RFC4P35249 363 aa12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 SSRP1Q08945 709 aaKnown RBP12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 EZH2Q15910 746 aaKnown RBP12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 ADALQ6DHV7 355 aa12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 ENGASEQ8NFI3 743 aa12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 KCNG4Q8TDN1 519 aa12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 MRPS27Q92552 414 aaKnown RBP12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 NAP1L5Q96NT1 182 aaPredicted RBP12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 SLC26A6Q9BXS9 759 aa12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.81□□□□□ -0.36
HLA-DMB-260ENST00000477537 A0A1W2PQ27 194 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 A0A1W2PQ64 194 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 A0A1W2PQD8 194 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 SPTLC2O15270 562 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 TM4SF1P30408 202 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 GNL2Q13823 731 aaKnown RBP12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 TRIM29Q14134 588 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 TRAPPC3LQ5T215 181 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 ANO1Q5XXA6 986 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 ZNF384Q8TF68 577 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 DNAJC25Q9H1X3 360 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 ANAPC4Q9UJX5 808 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 TNRC6CQ9HCJ0 1690 aaKnown RBP12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 NID2Q14112 1375 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 STK36Q9NRP7 1315 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 FMNL1O95466 1100 aaPredicted RBP12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 CHAF1AQ13111 956 aaPredicted RBP12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 RTN1Q16799 776 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 UBAC1Q9BSL1 405 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 MTA3Q9BTC8 594 aa12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.8□□□□□ -0.36
HLA-DMB-260ENST00000477537 GOLGB1Q14789 3259 aaKnown RBP12.79□□□□□ -0.36
HLA-DMB-260ENST00000477537 MYH2Q9UKX2 1941 aa12.79□□□□□ -0.36
HLA-DMB-260ENST00000477537 CYP2D7A0A087X1C5 515 aa12.79□□□□□ -0.36
HLA-DMB-260ENST00000477537 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.79□□□□□ -0.36
HLA-DMB-260ENST00000477537 UBE2Q2LH0YL09 131 aa12.79□□□□□ -0.36
HLA-DMB-260ENST00000477537 SMIM22K7EJ46 135 aa12.79□□□□□ -0.36
HLA-DMB-260ENST00000477537 PLSCR1O15162 318 aa12.79□□□□□ -0.36
HLA-DMB-260ENST00000477537 MECOMQ03112 1051 aa12.79□□□□□ -0.36
HLA-DMB-260ENST00000477537 TMTC2Q8N394 836 aa12.79□□□□□ -0.36
HLA-DMB-260ENST00000477537 ESR2Q92731 530 aa12.79□□□□□ -0.36
HLA-DMB-260ENST00000477537 NSUN4Q96CB9 384 aaKnown RBP12.79□□□□□ -0.36
HLA-DMB-260ENST00000477537 BRIP1Q9BX63 1249 aa12.79□□□□□ -0.36
HLA-DMB-260ENST00000477537 PDS5AQ29RF7 1337 aaKnown RBP12.79□□□□□ -0.36
HLA-DMB-260ENST00000477537 A0A1B0GVL5 298 aa12.78□□□□□ -0.36
HLA-DMB-260ENST00000477537 IFNAR1P17181 557 aa12.78□□□□□ -0.36
HLA-DMB-260ENST00000477537 ZNF165P49910 485 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms