RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 RFX7Q2KHR2 1363 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 AKAP11Q9UKA4 1901 aa8.7□□□□□ -1.02
HDAC3-207ENST00000475549 ZBTB7BO15156 539 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-207ENST00000475549 MCAMP43121 646 aa8.69□□□□□ -1.02
HDAC3-207ENST00000475549 BTDP43251 543 aa8.69□□□□□ -1.02
HDAC3-207ENST00000475549 LACTBP83111 547 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-207ENST00000475549 RRP1BQ14684 758 aaKnown RBP8.69□□□□□ -1.02
HDAC3-207ENST00000475549 MVPQ14764 893 aaKnown RBP8.69□□□□□ -1.02
HDAC3-207ENST00000475549 NOL9Q5SY16 702 aaKnown RBP8.69□□□□□ -1.02
HDAC3-207ENST00000475549 ZKSCAN2Q63HK3 967 aa8.69□□□□□ -1.02
HDAC3-207ENST00000475549 ANKRD23Q86SG2 305 aa8.69□□□□□ -1.02
HDAC3-207ENST00000475549 ZGPATQ8N5A5 531 aaKnown RBP8.69□□□□□ -1.02
HDAC3-207ENST00000475549 SSH3Q8TE77 659 aa8.69□□□□□ -1.02
HDAC3-207ENST00000475549 NSUN4Q96CB9 384 aaKnown RBP8.69□□□□□ -1.02
HDAC3-207ENST00000475549 HOOK2Q96ED9 719 aa8.69□□□□□ -1.02
HDAC3-207ENST00000475549 C1orf115Q9H7X2 142 aa8.69□□□□□ -1.02
HDAC3-207ENST00000475549 PTCH2Q9Y6C5 1203 aa8.69□□□□□ -1.02
HDAC3-207ENST00000475549 ZHX2Q9Y6X8 837 aa8.69□□□□□ -1.02
HDAC3-207ENST00000475549 ADGRA2Q96PE1 1338 aa8.69□□□□□ -1.02
HDAC3-207ENST00000475549 PDHXO00330 501 aa8.68□□□□□ -1.02
HDAC3-207ENST00000475549 ECM2O94769 699 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-207ENST00000475549 SLC34A2O95436 690 aa8.68□□□□□ -1.02
HDAC3-207ENST00000475549 PTPRAP18433 802 aa8.68□□□□□ -1.02
HDAC3-207ENST00000475549 EN2P19622 333 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-207ENST00000475549 ARID4AP29374 1257 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-207ENST00000475549 ATP8B2P98198 1209 aa8.68□□□□□ -1.02
HDAC3-207ENST00000475549 HNRNPUQ00839 825 aaKnown RBP eCLIP8.68□□□□□ -1.02
HDAC3-207ENST00000475549 PICALMQ13492 652 aa8.68□□□□□ -1.02
HDAC3-207ENST00000475549 CCDC84Q86UT8 332 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-207ENST00000475549 DZIP1Q86YF9 867 aaKnown RBP8.68□□□□□ -1.02
HDAC3-207ENST00000475549 ZNF333Q96JL9 665 aa8.68□□□□□ -1.02
HDAC3-207ENST00000475549 ZCCHC17Q9NP64 241 aaKnown RBP8.68□□□□□ -1.02
HDAC3-207ENST00000475549 CPA4Q9UI42 421 aa8.68□□□□□ -1.02
HDAC3-207ENST00000475549 AFG3L2Q9Y4W6 797 aa8.68□□□□□ -1.02
HDAC3-207ENST00000475549 ECM29Q5VYK3 1845 aa8.68□□□□□ -1.02
HDAC3-207ENST00000475549 MROH7-TTC4A0A0A0MT08 1334 aa8.67□□□□□ -1.02
HDAC3-207ENST00000475549 CXCL11O14625 94 aa8.67□□□□□ -1.02
HDAC3-207ENST00000475549 CYP2C8P10632 490 aa8.67□□□□□ -1.02
HDAC3-207ENST00000475549 G3BP1Q13283 466 aaKnown RBP eCLIP8.67□□□□□ -1.02
HDAC3-207ENST00000475549 SPTY2D1Q68D10 685 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-207ENST00000475549 ERICH6Q7L0X2 663 aa8.67□□□□□ -1.02
HDAC3-207ENST00000475549 ADGRA1Q86SQ6 560 aa8.67□□□□□ -1.02
HDAC3-207ENST00000475549 SCYL3Q8IZE3 742 aa8.67□□□□□ -1.02
HDAC3-207ENST00000475549 ARAP2Q8WZ64 1704 aa8.67□□□□□ -1.02
HDAC3-207ENST00000475549 TRIM47Q96LD4 638 aa8.67□□□□□ -1.02
HDAC3-207ENST00000475549 DBNDD2Q9BQY9 259 aa8.67□□□□□ -1.02
HDAC3-207ENST00000475549 OTOFQ9HC10 1997 aa8.67□□□□□ -1.02
HDAC3-207ENST00000475549 SNRKQ9NRH2 765 aa8.67□□□□□ -1.02
HDAC3-207ENST00000475549 NOP58Q9Y2X3 529 aaKnown RBP8.67□□□□□ -1.02
HDAC3-207ENST00000475549 A0A0G2JLL6 359 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-207ENST00000475549 FAM196BA6NMK8 535 aa8.66□□□□□ -1.02
HDAC3-207ENST00000475549 TBC1D12O60347 775 aa8.66□□□□□ -1.02
HDAC3-207ENST00000475549 CTNND1O60716 968 aaKnown RBP8.66□□□□□ -1.02
HDAC3-207ENST00000475549 SURF6O75683 361 aaKnown RBP8.66□□□□□ -1.02
HDAC3-207ENST00000475549 MYCP01106 439 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-207ENST00000475549 CYP2E1P05181 493 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-207ENST00000475549 BCRP11274 1271 aa8.66□□□□□ -1.02
HDAC3-207ENST00000475549 TNNI3KQ59H18 835 aa8.66□□□□□ -1.02
HDAC3-207ENST00000475549 PRPF38BQ5VTL8 546 aaKnown RBP8.66□□□□□ -1.02
HDAC3-207ENST00000475549 DIEXFQ68CQ4 756 aaKnown RBP8.66□□□□□ -1.02
HDAC3-207ENST00000475549 PRRT2Q7Z6L0 340 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-207ENST00000475549 ZSCAN29Q8IWY8 852 aaPredicted RBP8.66□□□□□ -1.02
HDAC3-207ENST00000475549 SH3TC2Q8TF17 1288 aa8.66□□□□□ -1.02
HDAC3-207ENST00000475549 GPR108Q9NPR9 543 aa8.66□□□□□ -1.02
HDAC3-207ENST00000475549 TLR7Q9NYK1 1049 aaKnown RBP8.66□□□□□ -1.02
HDAC3-207ENST00000475549 FPGT-TNNI3KV9GXZ4 949 aa8.66□□□□□ -1.02
HDAC3-207ENST00000475549 PSMC4P43686 418 aa8.65□□□□□ -1.02
HDAC3-207ENST00000475549 JAG1P78504 1218 aa8.65□□□□□ -1.02
HDAC3-207ENST00000475549 GORABQ5T7V8 394 aa8.65□□□□□ -1.02
HDAC3-207ENST00000475549 SLF2Q8IX21 1173 aa8.65□□□□□ -1.02
HDAC3-207ENST00000475549 PANK1Q8TE04 598 aa8.65□□□□□ -1.02
HDAC3-207ENST00000475549 SH3RF3Q8TEJ3 882 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-207ENST00000475549 EAF2Q96CJ1 260 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-207ENST00000475549 OSBPL5Q9H0X9 879 aaPredicted RBP8.65□□□□□ -1.02
HDAC3-207ENST00000475549 PIH1D3Q9NQM4 214 aaKnown RBP8.65□□□□□ -1.02
HDAC3-207ENST00000475549 RAI14Q9P0K7 980 aa8.65□□□□□ -1.02
HDAC3-207ENST00000475549 DBNLQ9UJU6 430 aaKnown RBP8.65□□□□□ -1.02
HDAC3-207ENST00000475549 LAMB1P07942 1786 aa8.65□□□□□ -1.02
HDAC3-207ENST00000475549 TRIM75PA6NK02 468 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 GNRH1P01148 92 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 LDHCP07864 332 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 UQCRFS1P1P0C7P4 283 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 OSBPP22059 807 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 ZAP70P43403 619 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 PPP4CP60510 307 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 GSTO1P78417 241 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 MTFR1Q15390 333 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 SHROOM1Q2M3G4 852 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-207ENST00000475549 SLC9C1Q4G0N8 1177 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 TREML2Q5T2D2 321 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 CEP85Q6P2H3 762 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 ITPRIPQ8IWB1 547 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 ZNF512BQ96KM6 892 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-207ENST00000475549 CCDC8Q9H0W5 538 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-207ENST00000475549 PICK1Q9NRD5 415 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 AATFQ9NY61 560 aaKnown RBP eCLIP8.64□□□□□ -1.03
HDAC3-207ENST00000475549 LRP2BPQ9P2M1 347 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 SRRDQ9UH36 339 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 NDUFB9Q9Y6M9 179 aa8.64□□□□□ -1.03
HDAC3-207ENST00000475549 MAP4K4O95819 1239 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms