RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 HMG20BQ9P0W2 317 aa18.54■□□□□ 0.56
VARS-223ENST00000474643 BTBD19C9JJ37 291 aa18.53■□□□□ 0.56
VARS-223ENST00000474643 IDI2Q9BXS1 227 aa18.53■□□□□ 0.56
VARS-223ENST00000474643 PTPN22Q9Y2R2 807 aa18.53■□□□□ 0.56
VARS-223ENST00000474643 ZBTB22O15209 634 aa18.52■□□□□ 0.56
VARS-223ENST00000474643 ARID4AP29374 1257 aaPredicted RBP18.52■□□□□ 0.56
VARS-223ENST00000474643 PI16Q6UXB8 463 aa18.52■□□□□ 0.56
VARS-223ENST00000474643 TBC1D9Q6ZT07 1266 aa18.52■□□□□ 0.56
VARS-223ENST00000474643 ZFPM1Q8IX07 1006 aa18.52■□□□□ 0.56
VARS-223ENST00000474643 DOCK2Q92608 1830 aa18.51■□□□□ 0.55
VARS-223ENST00000474643 TLR2O60603 784 aa18.51■□□□□ 0.55
VARS-223ENST00000474643 ECM2O94769 699 aaPredicted RBP18.51■□□□□ 0.55
VARS-223ENST00000474643 RRP1P56182 461 aaKnown RBP18.51■□□□□ 0.55
VARS-223ENST00000474643 SLC9C1Q4G0N8 1177 aa18.51■□□□□ 0.55
VARS-223ENST00000474643 TNNI3KQ59H18 835 aa18.51■□□□□ 0.55
VARS-223ENST00000474643 NOL9Q5SY16 702 aaKnown RBP18.51■□□□□ 0.55
VARS-223ENST00000474643 NBPF11Q86T75 865 aa18.51■□□□□ 0.55
VARS-223ENST00000474643 FAM163AQ96GL9 167 aaPredicted RBP18.51■□□□□ 0.55
VARS-223ENST00000474643 ZNF112Q9UJU3 913 aa18.51■□□□□ 0.55
VARS-223ENST00000474643 FPGT-TNNI3KV9GXZ4 949 aa18.51■□□□□ 0.55
VARS-223ENST00000474643 PDHXO00330 501 aa18.5■□□□□ 0.55
VARS-223ENST00000474643 BAG3O95817 575 aa18.5■□□□□ 0.55
VARS-223ENST00000474643 CENPBP07199 599 aaPredicted RBP18.5■□□□□ 0.55
VARS-223ENST00000474643 MCAMP43121 646 aa18.5■□□□□ 0.55
VARS-223ENST00000474643 CEP85Q6P2H3 762 aa18.5■□□□□ 0.55
VARS-223ENST00000474643 TEX11Q8IYF3 940 aa18.5■□□□□ 0.55
VARS-223ENST00000474643 SCYL3Q8IZE3 742 aa18.5■□□□□ 0.55
VARS-223ENST00000474643 PARK7Q99497 189 aaKnown RBP18.5■□□□□ 0.55
VARS-223ENST00000474643 TRIM34Q9BYJ4 488 aa18.5■□□□□ 0.55
VARS-223ENST00000474643 GPR108Q9NPR9 543 aa18.5■□□□□ 0.55
VARS-223ENST00000474643 SNRKQ9NRH2 765 aa18.5■□□□□ 0.55
VARS-223ENST00000474643 GPR75-ASB3A0A0A6YYF3 556 aa18.49■□□□□ 0.55
VARS-223ENST00000474643 MAP4K4O95819 1239 aaPredicted RBP18.49■□□□□ 0.55
VARS-223ENST00000474643 POLA2Q14181 598 aa18.49■□□□□ 0.55
VARS-223ENST00000474643 NAA16Q6N069 864 aaPredicted RBP18.49■□□□□ 0.55
VARS-223ENST00000474643 GADL1Q6ZQY3 521 aa18.49■□□□□ 0.55
VARS-223ENST00000474643 ANKRD23Q86SG2 305 aa18.49■□□□□ 0.55
VARS-223ENST00000474643 SSH3Q8TE77 659 aa18.49■□□□□ 0.55
VARS-223ENST00000474643 NSUN4Q96CB9 384 aaKnown RBP18.49■□□□□ 0.55
VARS-223ENST00000474643 TMEM106CQ9BVX2 250 aa18.49■□□□□ 0.55
VARS-223ENST00000474643 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.49■□□□□ 0.55
VARS-223ENST00000474643 ZBTB40Q9NUA8 1239 aa18.49■□□□□ 0.55
VARS-223ENST00000474643 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.49■□□□□ 0.55
VARS-223ENST00000474643 ZHX2Q9Y6X8 837 aa18.49■□□□□ 0.55
VARS-223ENST00000474643 HMMRO75330 724 aa18.48■□□□□ 0.55
VARS-223ENST00000474643 FASTKD5Q7L8L6 764 aaKnown RBP18.48■□□□□ 0.55
VARS-223ENST00000474643 DBNDD2Q9BQY9 259 aa18.48■□□□□ 0.55
VARS-223ENST00000474643 DDX4Q9NQI0 724 aaKnown RBP18.48■□□□□ 0.55
VARS-223ENST00000474643 CPA4Q9UI42 421 aa18.48■□□□□ 0.55
VARS-223ENST00000474643 KCNH4Q9UQ05 1017 aa18.48■□□□□ 0.55
VARS-223ENST00000474643 DDTLA6NHG4 134 aaPredicted RBP18.47■□□□□ 0.55
VARS-223ENST00000474643 CXCL11O14625 94 aa18.47■□□□□ 0.55
VARS-223ENST00000474643 CTNND1O60716 968 aaKnown RBP18.47■□□□□ 0.55
VARS-223ENST00000474643 PLCG2P16885 1265 aa18.47■□□□□ 0.55
VARS-223ENST00000474643 LACTBP83111 547 aaPredicted RBP18.47■□□□□ 0.55
VARS-223ENST00000474643 ERC1Q8IUD2 1116 aa18.47■□□□□ 0.55
VARS-223ENST00000474643 RPAP2Q8IXW5 612 aaPredicted RBP18.47■□□□□ 0.55
VARS-223ENST00000474643 RFX7Q2KHR2 1363 aa18.46■□□□□ 0.55
VARS-223ENST00000474643 TRIM75PA6NK02 468 aa18.46■□□□□ 0.55
VARS-223ENST00000474643 FMNL1O95466 1100 aaPredicted RBP18.46■□□□□ 0.55
VARS-223ENST00000474643 GNRH1P01148 92 aa18.46■□□□□ 0.55
VARS-223ENST00000474643 PTPRAP18433 802 aa18.46■□□□□ 0.55
VARS-223ENST00000474643 SLC4A8Q2Y0W8 1093 aa18.46■□□□□ 0.55
VARS-223ENST00000474643 BCL11AQ9H165 835 aa18.46■□□□□ 0.55
VARS-223ENST00000474643 AATFQ9NY61 560 aaKnown RBP eCLIP18.46■□□□□ 0.55
VARS-223ENST00000474643 PTCH2Q9Y6C5 1203 aa18.46■□□□□ 0.55
VARS-223ENST00000474643 MYCP01106 439 aaPredicted RBP18.45■□□□□ 0.54
VARS-223ENST00000474643 HOXD10P28358 340 aa18.45■□□□□ 0.54
VARS-223ENST00000474643 SH3BP5LQ7L8J4 393 aa18.45■□□□□ 0.54
VARS-223ENST00000474643 SMCR8Q8TEV9 937 aaPredicted RBP18.45■□□□□ 0.54
VARS-223ENST00000474643 OSBPL5Q9H0X9 879 aaPredicted RBP18.45■□□□□ 0.54
VARS-223ENST00000474643 ATRNL1Q5VV63 1379 aa18.44■□□□□ 0.54
VARS-223ENST00000474643 PHF20L1A8MW92 1017 aa18.44■□□□□ 0.54
VARS-223ENST00000474643 IDH1O75874 414 aaKnown RBP18.44■□□□□ 0.54
VARS-223ENST00000474643 RHBDL3P58872 404 aa18.44■□□□□ 0.54
VARS-223ENST00000474643 HSP90AB4PQ58FF6 505 aa18.44■□□□□ 0.54
VARS-223ENST00000474643 CRACR2BQ8N4Y2 399 aaPredicted RBP18.44■□□□□ 0.54
VARS-223ENST00000474643 SH3RF3Q8TEJ3 882 aaPredicted RBP18.44■□□□□ 0.54
VARS-223ENST00000474643 ARMC5Q96C12 935 aa18.44■□□□□ 0.54
VARS-223ENST00000474643 CCDC8Q9H0W5 538 aaPredicted RBP18.44■□□□□ 0.54
VARS-223ENST00000474643 EXOC6BQ9Y2D4 811 aa18.44■□□□□ 0.54
VARS-223ENST00000474643 TNRC18O15417 2968 aaPredicted RBP18.44■□□□□ 0.54
VARS-223ENST00000474643 A0A0G2JLL6 359 aaPredicted RBP18.43■□□□□ 0.54
VARS-223ENST00000474643 FAM196BA6NMK8 535 aa18.43■□□□□ 0.54
VARS-223ENST00000474643 NPM3O75607 178 aaKnown RBP18.43■□□□□ 0.54
VARS-223ENST00000474643 PSMC4P43686 418 aa18.43■□□□□ 0.54
VARS-223ENST00000474643 PRMT2P55345 433 aa18.43■□□□□ 0.54
VARS-223ENST00000474643 PRRT2Q7Z6L0 340 aaPredicted RBP18.43■□□□□ 0.54
VARS-223ENST00000474643 RAET1EQ8TD07 263 aa18.43■□□□□ 0.54
VARS-223ENST00000474643 ZNF384Q8TF68 577 aa18.43■□□□□ 0.54
VARS-223ENST00000474643 ARHGAP39Q9C0H5 1083 aa18.43■□□□□ 0.54
VARS-223ENST00000474643 HTTP42858 3142 aa18.43■□□□□ 0.54
VARS-223ENST00000474643 MAST2Q6P0Q8 1798 aa18.42■□□□□ 0.54
VARS-223ENST00000474643 POTEFA5A3E0 1075 aa18.42■□□□□ 0.54
VARS-223ENST00000474643 APBB1O00213 710 aa18.42■□□□□ 0.54
VARS-223ENST00000474643 CYP2C8P10632 490 aa18.42■□□□□ 0.54
VARS-223ENST00000474643 ZAP70P43403 619 aa18.42■□□□□ 0.54
VARS-223ENST00000474643 C17orf99Q6UX52 265 aa18.42■□□□□ 0.54
VARS-223ENST00000474643 AACSQ86V21 672 aa18.42■□□□□ 0.54
VARS-223ENST00000474643 TGFBRAP1Q8WUH2 860 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms