RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 EPHA10Q5JZY3 1008 aa11.47□□□□□ -0.57
CPSF4-211ENST00000471455 TEKT1Q969V4 418 aa11.47□□□□□ -0.57
CPSF4-211ENST00000471455 FAM84BQ96KN1 310 aaPredicted RBP11.47□□□□□ -0.57
CPSF4-211ENST00000471455 ZCCHC17Q9NP64 241 aaKnown RBP11.47□□□□□ -0.57
CPSF4-211ENST00000471455 ANP32CO43423 234 aa11.46□□□□□ -0.57
CPSF4-211ENST00000471455 GNRH1P01148 92 aa11.46□□□□□ -0.57
CPSF4-211ENST00000471455 CETPP11597 493 aa11.46□□□□□ -0.57
CPSF4-211ENST00000471455 MMRN1Q13201 1228 aa11.46□□□□□ -0.57
CPSF4-211ENST00000471455 METTL24Q5JXM2 366 aa11.46□□□□□ -0.57
CPSF4-211ENST00000471455 DCAF15Q66K64 600 aa11.46□□□□□ -0.57
CPSF4-211ENST00000471455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.46□□□□□ -0.57
CPSF4-211ENST00000471455 PTPN18Q99952 460 aa11.46□□□□□ -0.57
CPSF4-211ENST00000471455 SUGT1Q9Y2Z0 365 aa11.46□□□□□ -0.57
CPSF4-211ENST00000471455 SALL2Q9Y467 1007 aaPredicted RBP11.46□□□□□ -0.57
CPSF4-211ENST00000471455 RPAP1Q9BWH6 1393 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-211ENST00000471455 AOX1Q06278 1338 aa11.45□□□□□ -0.58
CPSF4-211ENST00000471455 SPDYE5A6NIY4 337 aa11.45□□□□□ -0.58
CPSF4-211ENST00000471455 PRMT2P55345 433 aa11.45□□□□□ -0.58
CPSF4-211ENST00000471455 CHAF1AQ13111 956 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-211ENST00000471455 SNAPC2Q13487 334 aa11.45□□□□□ -0.58
CPSF4-211ENST00000471455 CCDC184Q52MB2 194 aa11.45□□□□□ -0.58
CPSF4-211ENST00000471455 FKBP1CQ5VVH2 108 aa11.45□□□□□ -0.58
CPSF4-211ENST00000471455 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-211ENST00000471455 FAM83AQ86UY5 434 aa11.45□□□□□ -0.58
CPSF4-211ENST00000471455 ERO1BQ86YB8 467 aa11.45□□□□□ -0.58
CPSF4-211ENST00000471455 BRI3BPQ8WY22 251 aa11.45□□□□□ -0.58
CPSF4-211ENST00000471455 ZDHHC16Q969W1 377 aa11.45□□□□□ -0.58
CPSF4-211ENST00000471455 ZNF333Q96JL9 665 aa11.45□□□□□ -0.58
CPSF4-211ENST00000471455 TEPSINQ96N21 525 aa11.45□□□□□ -0.58
CPSF4-211ENST00000471455 TMEM39BQ9GZU3 492 aa11.45□□□□□ -0.58
CPSF4-211ENST00000471455 KIF16BQ96L93 1317 aa11.44□□□□□ -0.58
CPSF4-211ENST00000471455 SPDYE16A6NNV3 312 aaPredicted RBP11.44□□□□□ -0.58
CPSF4-211ENST00000471455 SLC4A8Q2Y0W8 1093 aa11.44□□□□□ -0.58
CPSF4-211ENST00000471455 HABP4Q5JVS0 413 aaKnown RBP11.44□□□□□ -0.58
CPSF4-211ENST00000471455 FBXO33Q7Z6M2 555 aa11.44□□□□□ -0.58
CPSF4-211ENST00000471455 SUCLG2Q96I99 432 aa11.44□□□□□ -0.58
CPSF4-211ENST00000471455 ZDHHC15Q96MV8 337 aa11.44□□□□□ -0.58
CPSF4-211ENST00000471455 WRNIP1Q96S55 665 aa11.44□□□□□ -0.58
CPSF4-211ENST00000471455 KCNK17Q96T54 332 aa11.44□□□□□ -0.58
CPSF4-211ENST00000471455 MRIQ9BWK5 157 aa11.44□□□□□ -0.58
CPSF4-211ENST00000471455 RIPOR2Q9Y4F9 1068 aa11.44□□□□□ -0.58
CPSF4-211ENST00000471455 UTYO14607 1347 aa11.43□□□□□ -0.58
CPSF4-211ENST00000471455 PDE8BO95263 885 aa11.43□□□□□ -0.58
CPSF4-211ENST00000471455 IFIT1P09914 478 aaKnown RBP11.43□□□□□ -0.58
CPSF4-211ENST00000471455 PPIL2Q13356 520 aa11.43□□□□□ -0.58
CPSF4-211ENST00000471455 PUM3Q15397 648 aaKnown RBP11.43□□□□□ -0.58
CPSF4-211ENST00000471455 RABL6Q3YEC7 729 aaPredicted RBP11.43□□□□□ -0.58
CPSF4-211ENST00000471455 FAM43AQ8N2R8 423 aa11.43□□□□□ -0.58
CPSF4-211ENST00000471455 DDX12PQ92771 950 aa11.43□□□□□ -0.58
CPSF4-211ENST00000471455 PUS3Q9BZE2 481 aaKnown RBP11.43□□□□□ -0.58
CPSF4-211ENST00000471455 PTCH2Q9Y6C5 1203 aa11.43□□□□□ -0.58
CPSF4-211ENST00000471455 PTPRCP08575 1304 aa11.42□□□□□ -0.58
CPSF4-211ENST00000471455 TLR2O60603 784 aa11.42□□□□□ -0.58
CPSF4-211ENST00000471455 NBPF7P0C2Y1 421 aaPredicted RBP11.42□□□□□ -0.58
CPSF4-211ENST00000471455 EN2P19622 333 aaPredicted RBP11.42□□□□□ -0.58
CPSF4-211ENST00000471455 ZEB1P37275 1124 aaPredicted RBP11.42□□□□□ -0.58
CPSF4-211ENST00000471455 HHIPL2Q6UWX4 724 aa11.42□□□□□ -0.58
CPSF4-211ENST00000471455 ZNF341Q9BYN7 854 aa11.42□□□□□ -0.58
CPSF4-211ENST00000471455 BICC1Q9H694 974 aaKnown RBP11.42□□□□□ -0.58
CPSF4-211ENST00000471455 IQSEC3Q9UPP2 1182 aaPredicted RBP11.42□□□□□ -0.58
CPSF4-211ENST00000471455 SNCAIPQ9Y6H5 919 aa11.42□□□□□ -0.58
CPSF4-211ENST00000471455 SLC5A1P13866 664 aa11.41□□□□□ -0.58
CPSF4-211ENST00000471455 HOXD10P28358 340 aa11.41□□□□□ -0.58
CPSF4-211ENST00000471455 LACTBP83111 547 aaPredicted RBP11.41□□□□□ -0.58
CPSF4-211ENST00000471455 PPATQ06203 517 aa11.41□□□□□ -0.58
CPSF4-211ENST00000471455 TYW1BQ6NUM6 668 aa11.41□□□□□ -0.58
CPSF4-211ENST00000471455 WDR66Q8TBY9 1149 aa11.41□□□□□ -0.58
CPSF4-211ENST00000471455 CEP290O15078 2479 aa11.4□□□□□ -0.58
CPSF4-211ENST00000471455 BTBD19C9JJ37 291 aa11.4□□□□□ -0.58
CPSF4-211ENST00000471455 CACNB3P54284 484 aa11.4□□□□□ -0.58
CPSF4-211ENST00000471455 VGLL2Q8N8G2 317 aa11.4□□□□□ -0.58
CPSF4-211ENST00000471455 NKX2-3Q8TAU0 364 aa11.4□□□□□ -0.58
CPSF4-211ENST00000471455 KAZALD1Q96I82 304 aa11.4□□□□□ -0.58
CPSF4-211ENST00000471455 GNL3LQ9NVN8 582 aaKnown RBP11.4□□□□□ -0.58
CPSF4-211ENST00000471455 IRF6O14896 467 aa11.39□□□□□ -0.59
CPSF4-211ENST00000471455 BCAMP50895 628 aa11.39□□□□□ -0.59
CPSF4-211ENST00000471455 LRRC24Q50LG9 513 aa11.39□□□□□ -0.59
CPSF4-211ENST00000471455 APOBEC3HQ6NTF7 200 aaKnown RBP11.39□□□□□ -0.59
CPSF4-211ENST00000471455 ADGRD1Q6QNK2 874 aa11.39□□□□□ -0.59
CPSF4-211ENST00000471455 ANKRD23Q86SG2 305 aa11.39□□□□□ -0.59
CPSF4-211ENST00000471455 ANKRD44Q8N8A2 993 aa11.39□□□□□ -0.59
CPSF4-211ENST00000471455 FAM151AQ8WW52 585 aa11.39□□□□□ -0.59
CPSF4-211ENST00000471455 LPIN2Q92539 896 aa11.39□□□□□ -0.59
CPSF4-211ENST00000471455 ZKSCAN4Q969J2 545 aaPredicted RBP11.39□□□□□ -0.59
CPSF4-211ENST00000471455 HTTP42858 3142 aa11.39□□□□□ -0.59
CPSF4-211ENST00000471455 EYA2O00167 538 aa11.38□□□□□ -0.59
CPSF4-211ENST00000471455 COL9A1P20849 921 aa11.38□□□□□ -0.59
CPSF4-211ENST00000471455 GRIK5Q16478 980 aa11.38□□□□□ -0.59
CPSF4-211ENST00000471455 RAET1EQ8TD07 263 aa11.38□□□□□ -0.59
CPSF4-211ENST00000471455 PARK7Q99497 189 aaKnown RBP11.38□□□□□ -0.59
CPSF4-211ENST00000471455 HDAC5Q9UQL6 1122 aa11.38□□□□□ -0.59
CPSF4-211ENST00000471455 MYH13Q9UKX3 1938 aa11.38□□□□□ -0.59
CPSF4-211ENST00000471455 SEMA3EO15041 775 aa11.37□□□□□ -0.59
CPSF4-211ENST00000471455 HRO43593 1189 aa11.37□□□□□ -0.59
CPSF4-211ENST00000471455 FGFR2P21802 821 aa11.37□□□□□ -0.59
CPSF4-211ENST00000471455 CAP1Q01518 475 aa11.37□□□□□ -0.59
CPSF4-211ENST00000471455 NOL9Q5SY16 702 aaKnown RBP11.37□□□□□ -0.59
CPSF4-211ENST00000471455 FAM9BQ8IZU0 186 aa11.37□□□□□ -0.59
CPSF4-211ENST00000471455 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.37□□□□□ -0.59
CPSF4-211ENST00000471455 SH3TC2Q8TF17 1288 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms