RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 PALLDQ8WX93 1383 aa7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 A0A087WZG4 1122 aa7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 PNMA6EA0A0J9YXQ4 647 aa7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 H7C1W4 665 aa7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 KCNQ2O43526 872 aa7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 SMTNP53814 917 aa7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 SLC27A3Q5K4L6 730 aa7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 FOXD4L5Q5VV16 416 aaPredicted RBP7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 SUCLG2Q96I99 432 aa7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 TRIM47Q96LD4 638 aa7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 ARXQ96QS3 562 aa7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 ISCA1Q9BUE6 129 aa7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 CCDC87Q9NVE4 849 aa7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 CWC25Q9NXE8 425 aaPredicted RBP7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 NOP58Q9Y2X3 529 aaKnown RBP7.5□□□□□ -1.21
SMNDC1-204ENST00000471297 DOT1LQ8TEK3 1739 aa7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 A6NJY4 79 aa7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 SRGAP3O43295 1099 aa7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 MAN1A2O60476 641 aa7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 EIF5BO60841 1220 aaKnown RBP7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 CRKLP46109 303 aaKnown RBP7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 EIF5P55010 431 aaKnown RBP7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 RBM6P78332 1123 aaKnown RBP7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 INTS5Q6P9B9 1019 aaKnown RBP7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 PRICKLE2Q7Z3G6 844 aa7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 ERC1Q8IUD2 1116 aa7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 TNS4Q8IZW8 715 aa7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 ZSCAN10Q96SZ4 725 aaPredicted RBP7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 HINFPQ9BQA5 517 aa7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 LRRCC1Q9C099 1032 aa7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 ZBTB1Q9Y2K1 713 aa7.49□□□□□ -1.21
SMNDC1-204ENST00000471297 M0R2N6 131 aa7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 SURF6O75683 361 aaKnown RBP7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 SNRPBP14678 240 aaKnown RBP7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 ITPK1Q13572 414 aa7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 TLR1Q15399 786 aa7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 C8orf34Q49A92 452 aa7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 BMP2KLQ5H9B9 411 aa7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 FAM196AQ6ZSG2 479 aa7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 LYSMD3Q7Z3D4 306 aa7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 RNF217Q8TC41 542 aa7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 KIF1BPQ96EK5 621 aa7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 FHDC1Q9C0D6 1143 aaPredicted RBP7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 DNMT3LQ9UJW3 386 aa7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 ZMIZ1Q9ULJ6 1067 aa7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 CNTNAP4Q9C0A0 1308 aa7.48□□□□□ -1.21
SMNDC1-204ENST00000471297 SOBPA7XYQ1 873 aa7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 PCCAP05165 728 aaPredicted RBP7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 GTF2E1P29083 439 aaPredicted RBP7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 CASP7P55210 303 aa7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 POU4F2Q12837 409 aa7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 G3BP1Q13283 466 aaKnown RBP eCLIP7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 MTFR1Q15390 333 aa7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 RABL6Q3YEC7 729 aaPredicted RBP7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 ZNF787Q6DD87 383 aa7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 TMEM214Q6NUQ4 689 aaKnown RBP7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 UBE3BQ7Z3V4 1068 aa7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 KRT27Q7Z3Y8 459 aa7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 ZBTB38Q8NAP3 1195 aaPredicted RBP7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 TSEN2Q8NCE0 465 aaKnown RBP7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 KAZALD1Q96I82 304 aa7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 BICC1Q9H694 974 aaKnown RBP7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 EXOC6BQ9Y2D4 811 aa7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 CICQ96RK0 1608 aaPredicted RBP7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 ZNF831Q5JPB2 1677 aa7.47□□□□□ -1.21
SMNDC1-204ENST00000471297 CDK2AP1O14519 115 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 SMARCA5O60264 1052 aaPredicted RBP7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 LGR5O75473 907 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 RPS6KA4O75676 772 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 OS9Q13438 667 aaPredicted RBP7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 HLFQ16534 295 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 PARP10Q53GL7 1025 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 CLEC4GQ6UXB4 293 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 ZNF34Q8IZ26 560 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 RHPN1Q8TCX5 695 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 FBXO41Q8TF61 875 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 STK32AQ8WU08 396 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 PLA2G12BQ9BX93 195 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 COPRSQ9NQ92 184 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 TJP1Q07157 1748 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 AOX1Q06278 1338 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 CDHR2Q9BYE9 1310 aa7.46□□□□□ -1.22
SMNDC1-204ENST00000471297 HSP90B1P14625 803 aaKnown RBP7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 RXRBP28702 533 aa7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 PDE1AP54750 535 aa7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 EPHA4P54764 986 aa7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 FOXO4P98177 505 aa7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 EPHA10Q5JZY3 1008 aa7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 TTC22Q5TAA0 569 aa7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 TMEM164Q5U3C3 297 aa7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 NLRP10Q86W26 655 aa7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 C16orf71Q8IYS4 520 aaPredicted RBP7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 CLASRPQ8N2M8 674 aaKnown RBP7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 LINC00116Q8NCU8 138 aa7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 UPF2Q9HAU5 1272 aaKnown RBP7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 SCHIP1Q9P0W5 487 aaPredicted RBP7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 STAP2Q9UGK3 403 aa7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 CCNL1Q9UK58 526 aaPredicted RBP7.45□□□□□ -1.22
SMNDC1-204ENST00000471297 ZNF652Q9Y2D9 606 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms