RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 CYP2D7A0A087X1C5 515 aa30.55■■■□□ 2.48
U2AF1-208ENST00000471250 FGRP09769 529 aa30.55■■■□□ 2.48
U2AF1-208ENST00000471250 USP5P45974 858 aa30.55■■■□□ 2.48
U2AF1-208ENST00000471250 AOC3Q16853 763 aa30.55■■■□□ 2.48
U2AF1-208ENST00000471250 MTA3Q9BTC8 594 aa30.55■■■□□ 2.48
U2AF1-208ENST00000471250 IGDCC4Q8TDY8 1250 aa30.55■■■□□ 2.48
U2AF1-208ENST00000471250 CHMP4CQ96CF2 233 aa30.55■■■□□ 2.48
U2AF1-208ENST00000471250 LLPHQ9BRT6 129 aaKnown RBP30.55■■■□□ 2.48
U2AF1-208ENST00000471250 BRPF3Q9ULD4 1205 aa30.55■■■□□ 2.48
U2AF1-208ENST00000471250 WDR33Q9C0J8 1336 aaKnown RBP30.54■■■□□ 2.48
U2AF1-208ENST00000471250 ZNF646O15015 1829 aaPredicted RBP30.54■■■□□ 2.48
U2AF1-208ENST00000471250 RRP12Q5JTH9 1297 aaKnown RBP30.54■■■□□ 2.48
U2AF1-208ENST00000471250 STRIP1Q5VSL9 837 aa30.54■■■□□ 2.48
U2AF1-208ENST00000471250 CDK5RAP2Q96SN8 1893 aa30.54■■■□□ 2.48
U2AF1-208ENST00000471250 PSMD1Q99460 953 aa30.54■■■□□ 2.48
U2AF1-208ENST00000471250 KLF18A0A0U1RQI7 1052 aa30.53■■■□□ 2.48
U2AF1-208ENST00000471250 SMIM22K7EJ46 135 aa30.53■■■□□ 2.48
U2AF1-208ENST00000471250 SYT1P21579 422 aa30.53■■■□□ 2.48
U2AF1-208ENST00000471250 MXD3Q9BW11 206 aa30.53■■■□□ 2.48
U2AF1-208ENST00000471250 TOMM22Q9NS69 142 aa30.53■■■□□ 2.48
U2AF1-208ENST00000471250 DAGLAQ9Y4D2 1042 aa30.53■■■□□ 2.48
U2AF1-208ENST00000471250 NAV1Q8NEY1 1877 aa30.53■■■□□ 2.48
U2AF1-208ENST00000471250 STK11IPQ8N1F8 1099 aa30.52■■■□□ 2.48
U2AF1-208ENST00000471250 KCNQ5Q9NR82 932 aa30.52■■■□□ 2.48
U2AF1-208ENST00000471250 MCM9Q9NXL9 1143 aa30.52■■■□□ 2.48
U2AF1-208ENST00000471250 PIM2Q9P1W9 311 aa30.52■■■□□ 2.48
U2AF1-208ENST00000471250 TTF2Q9UNY4 1162 aaKnown RBP30.52■■■□□ 2.48
U2AF1-208ENST00000471250 SCN9AQ15858 1988 aa30.52■■■□□ 2.48
U2AF1-208ENST00000471250 BAG4O95429 457 aaKnown RBP30.52■■■□□ 2.48
U2AF1-208ENST00000471250 LIFRP42702 1097 aa30.52■■■□□ 2.48
U2AF1-208ENST00000471250 RHBDL3P58872 404 aa30.52■■■□□ 2.48
U2AF1-208ENST00000471250 TGFBRAP1Q8WUH2 860 aa30.52■■■□□ 2.48
U2AF1-208ENST00000471250 ESR2Q92731 530 aa30.52■■■□□ 2.48
U2AF1-208ENST00000471250 SGIP1Q9BQI5 828 aa30.52■■■□□ 2.48
U2AF1-208ENST00000471250 NAP1L2Q9ULW6 460 aaPredicted RBP30.52■■■□□ 2.48
U2AF1-208ENST00000471250 PPIP5K2O43314 1243 aa30.51■■■□□ 2.47
U2AF1-208ENST00000471250 STX6O43752 255 aa30.51■■■□□ 2.47
U2AF1-208ENST00000471250 PDIA4P13667 645 aaKnown RBP30.51■■■□□ 2.47
U2AF1-208ENST00000471250 CCT2P78371 535 aaKnown RBP30.51■■■□□ 2.47
U2AF1-208ENST00000471250 DACT2Q5SW24 774 aa30.51■■■□□ 2.47
U2AF1-208ENST00000471250 SMARCC2Q8TAQ2 1214 aa30.51■■■□□ 2.47
U2AF1-208ENST00000471250 LY9Q9HBG7 655 aa30.51■■■□□ 2.47
U2AF1-208ENST00000471250 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.51■■■□□ 2.47
U2AF1-208ENST00000471250 F8W031 263 aaPredicted RBP30.5■■■□□ 2.47
U2AF1-208ENST00000471250 IFIT3O14879 490 aaKnown RBP30.5■■■□□ 2.47
U2AF1-208ENST00000471250 DTNBO60941 627 aa30.5■■■□□ 2.47
U2AF1-208ENST00000471250 SLC3A2P08195 630 aaKnown RBP30.5■■■□□ 2.47
U2AF1-208ENST00000471250 USP17L8P0C7I0 530 aa30.5■■■□□ 2.47
U2AF1-208ENST00000471250 CYP2D6P10635 497 aa30.5■■■□□ 2.47
U2AF1-208ENST00000471250 TMEM67Q5HYA8 995 aa30.5■■■□□ 2.47
U2AF1-208ENST00000471250 SOGA3Q5TF21 947 aa30.5■■■□□ 2.47
U2AF1-208ENST00000471250 SGMS1Q86VZ5 419 aa30.5■■■□□ 2.47
U2AF1-208ENST00000471250 TEX11Q8IYF3 940 aa30.5■■■□□ 2.47
U2AF1-208ENST00000471250 USP17L3A6NCW0 530 aa30.49■■■□□ 2.47
U2AF1-208ENST00000471250 USP17L4A6NCW7 530 aa30.49■■■□□ 2.47
U2AF1-208ENST00000471250 C12orf60Q5U649 245 aa30.49■■■□□ 2.47
U2AF1-208ENST00000471250 USP17L1Q7RTZ2 530 aa30.49■■■□□ 2.47
U2AF1-208ENST00000471250 HPS5Q9UPZ3 1129 aa30.49■■■□□ 2.47
U2AF1-208ENST00000471250 DDX11L8A8MPP1 907 aa30.49■■■□□ 2.47
U2AF1-208ENST00000471250 ORC4O43929 436 aa30.49■■■□□ 2.47
U2AF1-208ENST00000471250 HHIPL2Q6UWX4 724 aa30.49■■■□□ 2.47
U2AF1-208ENST00000471250 NSUN7Q8NE18 718 aaKnown RBP30.49■■■□□ 2.47
U2AF1-208ENST00000471250 GOLGA8BA8MQT2 603 aa30.48■■■□□ 2.47
U2AF1-208ENST00000471250 JAK2O60674 1132 aa30.48■■■□□ 2.47
U2AF1-208ENST00000471250 CTDNEP1O95476 244 aa30.48■■■□□ 2.47
U2AF1-208ENST00000471250 PDCP20941 246 aa30.48■■■□□ 2.47
U2AF1-208ENST00000471250 SART3Q15020 963 aaKnown RBP30.48■■■□□ 2.47
U2AF1-208ENST00000471250 MRIQ9BWK5 157 aa30.48■■■□□ 2.47
U2AF1-208ENST00000471250 VPS33BQ9H267 617 aa30.48■■■□□ 2.47
U2AF1-208ENST00000471250 FOCADQ5VW36 1801 aa30.48■■■□□ 2.47
U2AF1-208ENST00000471250 BRCA1P38398 1863 aaKnown RBP30.47■■■□□ 2.47
U2AF1-208ENST00000471250 ZSCAN22P10073 491 aaPredicted RBP30.47■■■□□ 2.47
U2AF1-208ENST00000471250 EVX2Q03828 476 aa30.47■■■□□ 2.47
U2AF1-208ENST00000471250 FOXD4L5Q5VV16 416 aaPredicted RBP30.47■■■□□ 2.47
U2AF1-208ENST00000471250 MAPKAPK5Q8IW41 473 aa30.47■■■□□ 2.47
U2AF1-208ENST00000471250 FOXD4L4Q8WXT5 416 aaPredicted RBP30.47■■■□□ 2.47
U2AF1-208ENST00000471250 NCOA5Q9HCD5 579 aaKnown RBP30.47■■■□□ 2.47
U2AF1-208ENST00000471250 DDX60LQ5H9U9 1706 aaKnown RBP30.47■■■□□ 2.47
U2AF1-208ENST00000471250 LARP1BQ659C4 914 aaKnown RBP30.46■■■□□ 2.47
U2AF1-208ENST00000471250 AMOTL1Q8IY63 956 aa30.46■■■□□ 2.47
U2AF1-208ENST00000471250 SENP2Q9HC62 589 aa30.46■■■□□ 2.47
U2AF1-208ENST00000471250 ROBO3Q96MS0 1386 aa30.46■■■□□ 2.47
U2AF1-208ENST00000471250 HMGN5P82970 282 aaKnown RBP30.46■■■□□ 2.47
U2AF1-208ENST00000471250 TEKT1Q969V4 418 aa30.46■■■□□ 2.47
U2AF1-208ENST00000471250 MTMR6Q9Y217 621 aa30.46■■■□□ 2.47
U2AF1-208ENST00000471250 CD2APQ9Y5K6 639 aa30.46■■■□□ 2.47
U2AF1-208ENST00000471250 PSME4Q14997 1843 aa30.45■■■□□ 2.47
U2AF1-208ENST00000471250 ERICH2A1L162 156 aa30.45■■■□□ 2.46
U2AF1-208ENST00000471250 PSDA5PKW4 1024 aaPredicted RBP30.45■■■□□ 2.46
U2AF1-208ENST00000471250 SCNN1DP51172 638 aa30.45■■■□□ 2.46
U2AF1-208ENST00000471250 PDE4BQ07343 736 aa30.45■■■□□ 2.46
U2AF1-208ENST00000471250 WTAPQ15007 396 aa30.45■■■□□ 2.46
U2AF1-208ENST00000471250 DALRD3Q5D0E6 543 aaKnown RBP30.45■■■□□ 2.46
U2AF1-208ENST00000471250 APOA5Q6Q788 366 aa30.45■■■□□ 2.46
U2AF1-208ENST00000471250 TMTC2Q8N394 836 aa30.45■■■□□ 2.46
U2AF1-208ENST00000471250 FLT1P17948 1338 aa30.44■■■□□ 2.46
U2AF1-208ENST00000471250 YDJCA8MPS7 323 aa30.44■■■□□ 2.46
U2AF1-208ENST00000471250 DHX16O60231 1041 aaKnown RBP30.44■■■□□ 2.46
U2AF1-208ENST00000471250 NT5C2P49902 561 aa30.44■■■□□ 2.46
U2AF1-208ENST00000471250 HDLBPQ00341 1268 aaKnown RBP30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms