RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 IQSEC3Q9UPP2 1182 aaPredicted RBP14.13□□□□□ -0.15
NEDD9-207ENST00000468612 ZHX2Q9Y6X8 837 aa14.13□□□□□ -0.15
NEDD9-207ENST00000468612 ATRNL1Q5VV63 1379 aa14.12□□□□□ -0.15
NEDD9-207ENST00000468612 PTPRFP10586 1907 aa14.12□□□□□ -0.15
NEDD9-207ENST00000468612 CCDC57Q2TAC2 916 aa14.12□□□□□ -0.15
NEDD9-207ENST00000468612 TJAP1Q5JTD0 557 aa14.12□□□□□ -0.15
NEDD9-207ENST00000468612 LMBR1LQ6UX01 489 aa14.12□□□□□ -0.15
NEDD9-207ENST00000468612 SCYL3Q8IZE3 742 aa14.12□□□□□ -0.15
NEDD9-207ENST00000468612 FAM122AQ96E09 287 aa14.12□□□□□ -0.15
NEDD9-207ENST00000468612 STK31Q9BXU1 1019 aa14.12□□□□□ -0.15
NEDD9-207ENST00000468612 SUGT1Q9Y2Z0 365 aa14.12□□□□□ -0.15
NEDD9-207ENST00000468612 MAST3O60307 1309 aa14.12□□□□□ -0.15
NEDD9-207ENST00000468612 HOXD11P31277 338 aaPredicted RBP14.11□□□□□ -0.15
NEDD9-207ENST00000468612 CALD1Q05682 793 aaKnown RBP14.11□□□□□ -0.15
NEDD9-207ENST00000468612 TCP10Q12799 353 aa14.11□□□□□ -0.15
NEDD9-207ENST00000468612 TAF7LQ5H9L4 462 aa14.11□□□□□ -0.15
NEDD9-207ENST00000468612 EPHA10Q5JZY3 1008 aa14.11□□□□□ -0.15
NEDD9-207ENST00000468612 DNAAF4Q8WXU2 420 aa14.11□□□□□ -0.15
NEDD9-207ENST00000468612 TRIB2Q92519 343 aa14.11□□□□□ -0.15
NEDD9-207ENST00000468612 TTYH1Q9H313 450 aaPredicted RBP14.11□□□□□ -0.15
NEDD9-207ENST00000468612 AGTPBP1Q9UPW5 1226 aa14.11□□□□□ -0.15
NEDD9-207ENST00000468612 NFIAQ12857 509 aa14.1□□□□□ -0.15
NEDD9-207ENST00000468612 LBHD1Q9BQE6 289 aaPredicted RBP14.1□□□□□ -0.15
NEDD9-207ENST00000468612 PICK1Q9NRD5 415 aa14.1□□□□□ -0.15
NEDD9-207ENST00000468612 FAM198AQ9UFP1 575 aa14.1□□□□□ -0.15
NEDD9-207ENST00000468612 ADAMTS8Q9UP79 889 aa14.1□□□□□ -0.15
NEDD9-207ENST00000468612 PLXNB2O15031 1838 aa14.1□□□□□ -0.15
NEDD9-207ENST00000468612 PHIPQ8WWQ0 1821 aa14.09□□□□□ -0.15
NEDD9-207ENST00000468612 SLC4A2P04920 1241 aa14.09□□□□□ -0.15
NEDD9-207ENST00000468612 PRKAR2AP13861 404 aaKnown RBP14.09□□□□□ -0.15
NEDD9-207ENST00000468612 FOSL2P15408 326 aa14.09□□□□□ -0.15
NEDD9-207ENST00000468612 FLIIQ13045 1269 aa14.09□□□□□ -0.15
NEDD9-207ENST00000468612 RALBP1Q15311 655 aa14.09□□□□□ -0.15
NEDD9-207ENST00000468612 LHX8Q68G74 356 aa14.09□□□□□ -0.15
NEDD9-207ENST00000468612 CDC42EP5Q6NZY7 148 aa14.09□□□□□ -0.15
NEDD9-207ENST00000468612 VPS37DQ86XT2 251 aa14.09□□□□□ -0.15
NEDD9-207ENST00000468612 PUS3Q9BZE2 481 aaKnown RBP14.09□□□□□ -0.15
NEDD9-207ENST00000468612 AK9Q5TCS8 1911 aa14.09□□□□□ -0.15
NEDD9-207ENST00000468612 FRAT2O75474 233 aaPredicted RBP14.08□□□□□ -0.16
NEDD9-207ENST00000468612 WDR43Q15061 677 aaKnown RBP eCLIP14.08□□□□□ -0.16
NEDD9-207ENST00000468612 TREML2Q5T2D2 321 aa14.08□□□□□ -0.16
NEDD9-207ENST00000468612 PNMA3Q9UL41 463 aa14.08□□□□□ -0.16
NEDD9-207ENST00000468612 DAGLAQ9Y4D2 1042 aa14.08□□□□□ -0.16
NEDD9-207ENST00000468612 MAST2Q6P0Q8 1798 aa14.08□□□□□ -0.16
NEDD9-207ENST00000468612 TRIM75PA6NK02 468 aa14.07□□□□□ -0.16
NEDD9-207ENST00000468612 GCLCP48506 637 aaPredicted RBP14.07□□□□□ -0.16
NEDD9-207ENST00000468612 SMAD3P84022 425 aaKnown RBP14.07□□□□□ -0.16
NEDD9-207ENST00000468612 MAP3K10Q02779 954 aa14.07□□□□□ -0.16
NEDD9-207ENST00000468612 SHHQ15465 462 aa14.07□□□□□ -0.16
NEDD9-207ENST00000468612 ZFPM1Q8IX07 1006 aa14.07□□□□□ -0.16
NEDD9-207ENST00000468612 LTBP2Q14767 1821 aa14.06□□□□□ -0.16
NEDD9-207ENST00000468612 BDP1A6H8Y1 2624 aa14.06□□□□□ -0.16
NEDD9-207ENST00000468612 TMEM265A0A087WTH1 108 aa14.06□□□□□ -0.16
NEDD9-207ENST00000468612 CACNB2Q08289 660 aaPredicted RBP14.06□□□□□ -0.16
NEDD9-207ENST00000468612 FKBP5Q13451 457 aaPredicted RBP14.06□□□□□ -0.16
NEDD9-207ENST00000468612 CAVIN4Q5BKX8 364 aa14.06□□□□□ -0.16
NEDD9-207ENST00000468612 C9orf50Q5SZB4 431 aa14.06□□□□□ -0.16
NEDD9-207ENST00000468612 USP38Q8NB14 1042 aa14.06□□□□□ -0.16
NEDD9-207ENST00000468612 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
NEDD9-207ENST00000468612 NCOR1O75376 2440 aa14.06□□□□□ -0.16
NEDD9-207ENST00000468612 MROH5Q6ZUA9 1318 aa14.06□□□□□ -0.16
NEDD9-207ENST00000468612 CTNND1O60716 968 aaKnown RBP14.05□□□□□ -0.16
NEDD9-207ENST00000468612 XRCC5P13010 732 aaKnown RBP14.05□□□□□ -0.16
NEDD9-207ENST00000468612 CYP2B6P20813 491 aa14.05□□□□□ -0.16
NEDD9-207ENST00000468612 PROCA1Q8NCQ7 364 aaPredicted RBP14.05□□□□□ -0.16
NEDD9-207ENST00000468612 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.05□□□□□ -0.16
NEDD9-207ENST00000468612 DOCK2Q92608 1830 aa14.05□□□□□ -0.16
NEDD9-207ENST00000468612 DOCK1Q14185 1865 aa14.05□□□□□ -0.16
NEDD9-207ENST00000468612 APAF1O14727 1248 aa14.04□□□□□ -0.16
NEDD9-207ENST00000468612 CCND3P30281 292 aaPredicted RBP14.04□□□□□ -0.16
NEDD9-207ENST00000468612 MAP3K12Q12852 859 aa14.04□□□□□ -0.16
NEDD9-207ENST00000468612 DIXDC1Q155Q3 683 aa14.04□□□□□ -0.16
NEDD9-207ENST00000468612 BEND3Q5T5X7 828 aa14.04□□□□□ -0.16
NEDD9-207ENST00000468612 SH3BP5LQ7L8J4 393 aa14.04□□□□□ -0.16
NEDD9-207ENST00000468612 CCDC84Q86UT8 332 aaPredicted RBP14.04□□□□□ -0.16
NEDD9-207ENST00000468612 VGLL2Q8N8G2 317 aa14.04□□□□□ -0.16
NEDD9-207ENST00000468612 TSR2Q969E8 191 aaKnown RBP14.04□□□□□ -0.16
NEDD9-207ENST00000468612 USP40Q9NVE5 1235 aa14.04□□□□□ -0.16
NEDD9-207ENST00000468612 MORF4L1Q9UBU8 362 aa14.04□□□□□ -0.16
NEDD9-207ENST00000468612 LRRFIP2Q9Y608 721 aaKnown RBP14.04□□□□□ -0.16
NEDD9-207ENST00000468612 SLURP2P0DP57 97 aa14.03□□□□□ -0.16
NEDD9-207ENST00000468612 TWISTNBQ3B726 338 aaPredicted RBP14.03□□□□□ -0.16
NEDD9-207ENST00000468612 TRMT44Q8IYL2 757 aaKnown RBP14.03□□□□□ -0.16
NEDD9-207ENST00000468612 SENP6Q9GZR1 1112 aaPredicted RBP14.03□□□□□ -0.16
NEDD9-207ENST00000468612 MYBBP1AQ9BQG0 1328 aaKnown RBP14.03□□□□□ -0.16
NEDD9-207ENST00000468612 LOC285556D6RIA3 1793 aa14.03□□□□□ -0.16
NEDD9-207ENST00000468612 RFX7Q2KHR2 1363 aa14.02□□□□□ -0.17
NEDD9-207ENST00000468612 KIF16BQ96L93 1317 aa14.02□□□□□ -0.17
NEDD9-207ENST00000468612 GRM8O00222 908 aa14.02□□□□□ -0.17
NEDD9-207ENST00000468612 ZKSCAN1P17029 563 aaPredicted RBP14.02□□□□□ -0.17
NEDD9-207ENST00000468612 WDR66Q8TBY9 1149 aa14.02□□□□□ -0.17
NEDD9-207ENST00000468612 SOCS4Q8WXH5 440 aa14.02□□□□□ -0.17
NEDD9-207ENST00000468612 USP6NLQ92738 828 aa14.02□□□□□ -0.17
NEDD9-207ENST00000468612 NUDT12Q9BQG2 462 aa14.02□□□□□ -0.17
NEDD9-207ENST00000468612 IDI2Q9BXS1 227 aa14.02□□□□□ -0.17
NEDD9-207ENST00000468612 ASCC2Q9H1I8 757 aaPredicted RBP14.02□□□□□ -0.17
NEDD9-207ENST00000468612 PRKAG2Q9UGJ0 569 aa14.02□□□□□ -0.17
NEDD9-207ENST00000468612 SYNGAP1Q96PV0 1343 aa14.01□□□□□ -0.17
NEDD9-207ENST00000468612 ENTPD3O75355 529 aa14.01□□□□□ -0.17
NEDD9-207ENST00000468612 PDE8BO95263 885 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms