RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 DCAF15Q66K64 600 aa18.52■□□□□ 0.56
ATG4B-215ENST00000468018 NAA16Q6N069 864 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-215ENST00000468018 TMED8Q6PL24 325 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-215ENST00000468018 CFHR5Q9BXR6 569 aa18.52■□□□□ 0.56
ATG4B-215ENST00000468018 ZNF341Q9BYN7 854 aa18.52■□□□□ 0.56
ATG4B-215ENST00000468018 LRRCC1Q9C099 1032 aa18.52■□□□□ 0.56
ATG4B-215ENST00000468018 ANTXR1Q9H6X2 564 aa18.52■□□□□ 0.56
ATG4B-215ENST00000468018 SNCAIPQ9Y6H5 919 aa18.52■□□□□ 0.56
ATG4B-215ENST00000468018 NDUFB9Q9Y6M9 179 aa18.52■□□□□ 0.56
ATG4B-215ENST00000468018 TESPA1A2RU30 521 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-215ENST00000468018 DDTLA6NHG4 134 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-215ENST00000468018 MANSC4A6NHS7 340 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-215ENST00000468018 IFIT2P09913 472 aaKnown RBP18.51■□□□□ 0.55
ATG4B-215ENST00000468018 SREBF2Q12772 1141 aa18.51■□□□□ 0.55
ATG4B-215ENST00000468018 MIGA2Q7L4E1 593 aa18.51■□□□□ 0.55
ATG4B-215ENST00000468018 CRBNQ96SW2 442 aa18.51■□□□□ 0.55
ATG4B-215ENST00000468018 ELP3Q9H9T3 547 aa18.51■□□□□ 0.55
ATG4B-215ENST00000468018 DDX60LQ5H9U9 1706 aaKnown RBP18.51■□□□□ 0.55
ATG4B-215ENST00000468018 SPDYE5A6NIY4 337 aa18.5■□□□□ 0.55
ATG4B-215ENST00000468018 TRPA1O75762 1119 aa18.5■□□□□ 0.55
ATG4B-215ENST00000468018 INHBEP58166 350 aa18.5■□□□□ 0.55
ATG4B-215ENST00000468018 OPTNQ96CV9 577 aa18.5■□□□□ 0.55
ATG4B-215ENST00000468018 MS4A4AQ96JQ5 239 aa18.5■□□□□ 0.55
ATG4B-215ENST00000468018 WRNIP1Q96S55 665 aa18.5■□□□□ 0.55
ATG4B-215ENST00000468018 PHF20L1A8MW92 1017 aa18.49■□□□□ 0.55
ATG4B-215ENST00000468018 ATP5JP18859 108 aa18.49■□□□□ 0.55
ATG4B-215ENST00000468018 NOL9Q5SY16 702 aaKnown RBP18.49■□□□□ 0.55
ATG4B-215ENST00000468018 CNKSR2Q8WXI2 1034 aa18.49■□□□□ 0.55
ATG4B-215ENST00000468018 AATFQ9NY61 560 aaKnown RBP eCLIP18.49■□□□□ 0.55
ATG4B-215ENST00000468018 CSADQ9Y600 493 aa18.49■□□□□ 0.55
ATG4B-215ENST00000468018 TBC1D12O60347 775 aa18.48■□□□□ 0.55
ATG4B-215ENST00000468018 PLCG2P16885 1265 aa18.48■□□□□ 0.55
ATG4B-215ENST00000468018 INPP5BP32019 993 aa18.48■□□□□ 0.55
ATG4B-215ENST00000468018 NOM1Q5C9Z4 860 aaKnown RBP18.48■□□□□ 0.55
ATG4B-215ENST00000468018 SH3RF3Q8TEJ3 882 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-215ENST00000468018 ZKSCAN4Q969J2 545 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-215ENST00000468018 OSBPL5Q9H0X9 879 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-215ENST00000468018 IGF2BP3O00425 579 aaKnown RBP eCLIP18.47■□□□□ 0.55
ATG4B-215ENST00000468018 SMARCA5O60264 1052 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-215ENST00000468018 IDH1O75874 414 aaKnown RBP18.47■□□□□ 0.55
ATG4B-215ENST00000468018 BAG3O95817 575 aa18.47■□□□□ 0.55
ATG4B-215ENST00000468018 PICALMQ13492 652 aa18.47■□□□□ 0.55
ATG4B-215ENST00000468018 TTF1Q15361 905 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-215ENST00000468018 IFFO2Q5TF58 517 aa18.47■□□□□ 0.55
ATG4B-215ENST00000468018 ERO1BQ86YB8 467 aa18.47■□□□□ 0.55
ATG4B-215ENST00000468018 IFNL1Q8IU54 200 aa18.47■□□□□ 0.55
ATG4B-215ENST00000468018 TEX11Q8IYF3 940 aa18.47■□□□□ 0.55
ATG4B-215ENST00000468018 TNS4Q8IZW8 715 aa18.47■□□□□ 0.55
ATG4B-215ENST00000468018 NAV1Q8NEY1 1877 aa18.47■□□□□ 0.55
ATG4B-215ENST00000468018 CYP7A1P22680 504 aa18.46■□□□□ 0.55
ATG4B-215ENST00000468018 MAP3K12Q12852 859 aa18.46■□□□□ 0.55
ATG4B-215ENST00000468018 MAGEB6Q8N7X4 407 aa18.46■□□□□ 0.55
ATG4B-215ENST00000468018 HAUS7Q99871 368 aa18.46■□□□□ 0.55
ATG4B-215ENST00000468018 PTPN18Q99952 460 aa18.46■□□□□ 0.55
ATG4B-215ENST00000468018 ALDH1A1P00352 501 aa18.45■□□□□ 0.54
ATG4B-215ENST00000468018 SLURP2P0DP57 97 aa18.45■□□□□ 0.54
ATG4B-215ENST00000468018 PPATQ06203 517 aa18.45■□□□□ 0.54
ATG4B-215ENST00000468018 PPIL2Q13356 520 aa18.45■□□□□ 0.54
ATG4B-215ENST00000468018 AAMPQ13685 434 aa18.45■□□□□ 0.54
ATG4B-215ENST00000468018 CERS3Q8IU89 383 aa18.45■□□□□ 0.54
ATG4B-215ENST00000468018 FLT1P17948 1338 aa18.45■□□□□ 0.54
ATG4B-215ENST00000468018 TCRBV5S4A2TA0A5A2 114 aa18.44■□□□□ 0.54
ATG4B-215ENST00000468018 IRF6O14896 467 aa18.44■□□□□ 0.54
ATG4B-215ENST00000468018 GTF2A2P52657 109 aa18.44■□□□□ 0.54
ATG4B-215ENST00000468018 DYNLL1P63167 89 aaKnown RBP18.44■□□□□ 0.54
ATG4B-215ENST00000468018 METTL16Q86W50 562 aaKnown RBP18.44■□□□□ 0.54
ATG4B-215ENST00000468018 ZSCAN29Q8IWY8 852 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-215ENST00000468018 BRI3BPQ8WY22 251 aa18.44■□□□□ 0.54
ATG4B-215ENST00000468018 EDC3Q96F86 508 aaKnown RBP18.44■□□□□ 0.54
ATG4B-215ENST00000468018 OTUD5Q96G74 571 aa18.44■□□□□ 0.54
ATG4B-215ENST00000468018 RIOK1Q9BRS2 568 aaKnown RBP18.44■□□□□ 0.54
ATG4B-215ENST00000468018 NOL10Q9BSC4 688 aaKnown RBP18.44■□□□□ 0.54
ATG4B-215ENST00000468018 BOLA2Q9H3K6 86 aa18.44■□□□□ 0.54
ATG4B-215ENST00000468018 PAG1Q9NWQ8 432 aa18.44■□□□□ 0.54
ATG4B-215ENST00000468018 KCNH4Q9UQ05 1017 aa18.44■□□□□ 0.54
ATG4B-215ENST00000468018 GOLIM4O00461 696 aa18.43■□□□□ 0.54
ATG4B-215ENST00000468018 PDE6AP16499 860 aa18.43■□□□□ 0.54
ATG4B-215ENST00000468018 HDAC1Q13547 482 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-215ENST00000468018 DNAJC2Q99543 621 aaKnown RBP18.43■□□□□ 0.54
ATG4B-215ENST00000468018 DHX36Q9H2U1 1008 aaKnown RBP18.43■□□□□ 0.54
ATG4B-215ENST00000468018 R3HDMLQ9H3Y0 253 aa18.43■□□□□ 0.54
ATG4B-215ENST00000468018 TBC1D8O95759 1140 aa18.42■□□□□ 0.54
ATG4B-215ENST00000468018 SCYL3Q8IZE3 742 aa18.42■□□□□ 0.54
ATG4B-215ENST00000468018 MIGA1Q8NAN2 632 aa18.42■□□□□ 0.54
ATG4B-215ENST00000468018 TGFBRAP1Q8WUH2 860 aa18.42■□□□□ 0.54
ATG4B-215ENST00000468018 ECHDC1Q9NTX5 307 aa18.42■□□□□ 0.54
ATG4B-215ENST00000468018 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-215ENST00000468018 BAZ2AQ9UIF9 1905 aaKnown RBP18.41■□□□□ 0.54
ATG4B-215ENST00000468018 GPR25O00155 361 aa18.41■□□□□ 0.54
ATG4B-215ENST00000468018 CTNND1O60716 968 aaKnown RBP18.41■□□□□ 0.54
ATG4B-215ENST00000468018 SLC9C2Q5TAH2 1124 aa18.41■□□□□ 0.54
ATG4B-215ENST00000468018 MAPKAPK5Q8IW41 473 aa18.41■□□□□ 0.54
ATG4B-215ENST00000468018 HERC5Q9UII4 1024 aaKnown RBP18.41■□□□□ 0.54
ATG4B-215ENST00000468018 SALL3Q9BXA9 1300 aa18.41■□□□□ 0.54
ATG4B-215ENST00000468018 LOC285556D6RIA3 1793 aa18.4■□□□□ 0.54
ATG4B-215ENST00000468018 CCL15-CCL14A0A0B4J2E2 113 aa18.4■□□□□ 0.54
ATG4B-215ENST00000468018 ADD2P35612 726 aa18.4■□□□□ 0.54
ATG4B-215ENST00000468018 MOGSQ13724 837 aa18.4■□□□□ 0.54
ATG4B-215ENST00000468018 CCL15Q16663 113 aa18.4■□□□□ 0.54
ATG4B-215ENST00000468018 ZNF296Q8WUU4 475 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms