RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 RBBP6Q7Z6E9 1792 aaKnown RBP17.25■□□□□ 0.35
CCHCR1-211ENST00000467553 GAKO14976 1311 aa17.25■□□□□ 0.35
CCHCR1-211ENST00000467553 APBB1O00213 710 aa17.25■□□□□ 0.35
CCHCR1-211ENST00000467553 HMMRO75330 724 aa17.25■□□□□ 0.35
CCHCR1-211ENST00000467553 PRMT2P55345 433 aa17.25■□□□□ 0.35
CCHCR1-211ENST00000467553 RASGRF1Q13972 1273 aa17.25■□□□□ 0.35
CCHCR1-211ENST00000467553 DIXDC1Q155Q3 683 aa17.25■□□□□ 0.35
CCHCR1-211ENST00000467553 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
CCHCR1-211ENST00000467553 FAM43AQ8N2R8 423 aa17.25■□□□□ 0.35
CCHCR1-211ENST00000467553 CCDC8Q9H0W5 538 aaPredicted RBP17.25■□□□□ 0.35
CCHCR1-211ENST00000467553 BCL11AQ9H165 835 aa17.25■□□□□ 0.35
CCHCR1-211ENST00000467553 ABCF2Q9UG63 623 aa17.25■□□□□ 0.35
CCHCR1-211ENST00000467553 BTBD19C9JJ37 291 aa17.24■□□□□ 0.35
CCHCR1-211ENST00000467553 RRP1P56182 461 aaKnown RBP17.24■□□□□ 0.35
CCHCR1-211ENST00000467553 HSP90AB4PQ58FF6 505 aa17.24■□□□□ 0.35
CCHCR1-211ENST00000467553 TTC39AQ5SRH9 613 aa17.24■□□□□ 0.35
CCHCR1-211ENST00000467553 MIGA2Q7L4E1 593 aa17.24■□□□□ 0.35
CCHCR1-211ENST00000467553 ANKRD23Q86SG2 305 aa17.24■□□□□ 0.35
CCHCR1-211ENST00000467553 DBNDD2Q9BQY9 259 aa17.24■□□□□ 0.35
CCHCR1-211ENST00000467553 FAM198AQ9UFP1 575 aa17.24■□□□□ 0.35
CCHCR1-211ENST00000467553 KCNH4Q9UQ05 1017 aa17.24■□□□□ 0.35
CCHCR1-211ENST00000467553 CXCL11O14625 94 aa17.23■□□□□ 0.35
CCHCR1-211ENST00000467553 UQCRFS1P1P0C7P4 283 aa17.23■□□□□ 0.35
CCHCR1-211ENST00000467553 TCP10Q12799 353 aa17.23■□□□□ 0.35
CCHCR1-211ENST00000467553 CCDC158Q5M9N0 1113 aa17.23■□□□□ 0.35
CCHCR1-211ENST00000467553 DZIP1Q86YF9 867 aaKnown RBP17.23■□□□□ 0.35
CCHCR1-211ENST00000467553 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
CCHCR1-211ENST00000467553 HMG20BQ9P0W2 317 aa17.23■□□□□ 0.35
CCHCR1-211ENST00000467553 IGSF3O75054 1194 aa17.22■□□□□ 0.35
CCHCR1-211ENST00000467553 NPM3O75607 178 aaKnown RBP17.22■□□□□ 0.35
CCHCR1-211ENST00000467553 INPP5BP32019 993 aa17.22■□□□□ 0.35
CCHCR1-211ENST00000467553 MAP3K10Q02779 954 aa17.22■□□□□ 0.35
CCHCR1-211ENST00000467553 NFIAQ12857 509 aa17.22■□□□□ 0.35
CCHCR1-211ENST00000467553 SPATA5Q8NB90 893 aa17.22■□□□□ 0.35
CCHCR1-211ENST00000467553 EAF2Q96CJ1 260 aaPredicted RBP17.22■□□□□ 0.35
CCHCR1-211ENST00000467553 IL1RAPL2Q9NP60 686 aa17.22■□□□□ 0.35
CCHCR1-211ENST00000467553 LDHCP07864 332 aa17.21■□□□□ 0.35
CCHCR1-211ENST00000467553 ARID4AP29374 1257 aaPredicted RBP17.21■□□□□ 0.35
CCHCR1-211ENST00000467553 GSTO1P78417 241 aa17.21■□□□□ 0.35
CCHCR1-211ENST00000467553 LACTBP83111 547 aaPredicted RBP17.21■□□□□ 0.35
CCHCR1-211ENST00000467553 PI16Q6UXB8 463 aa17.21■□□□□ 0.35
CCHCR1-211ENST00000467553 ERICH6Q7L0X2 663 aa17.21■□□□□ 0.35
CCHCR1-211ENST00000467553 RHPN1Q8TCX5 695 aa17.21■□□□□ 0.35
CCHCR1-211ENST00000467553 TMEM106CQ9BVX2 250 aa17.21■□□□□ 0.35
CCHCR1-211ENST00000467553 SNRKQ9NRH2 765 aa17.21■□□□□ 0.35
CCHCR1-211ENST00000467553 KIAA0100Q14667 2235 aaKnown RBP17.2■□□□□ 0.34
CCHCR1-211ENST00000467553 DOCK2Q92608 1830 aa17.2■□□□□ 0.34
CCHCR1-211ENST00000467553 MCAMP43121 646 aa17.2■□□□□ 0.34
CCHCR1-211ENST00000467553 RGS3P49796 1198 aa17.2■□□□□ 0.34
CCHCR1-211ENST00000467553 SLC9C1Q4G0N8 1177 aa17.2■□□□□ 0.34
CCHCR1-211ENST00000467553 C17orf99Q6UX52 265 aa17.2■□□□□ 0.34
CCHCR1-211ENST00000467553 TBC1D9Q6ZT07 1266 aa17.2■□□□□ 0.34
CCHCR1-211ENST00000467553 AACSQ86V21 672 aa17.2■□□□□ 0.34
CCHCR1-211ENST00000467553 TLR7Q9NYK1 1049 aaKnown RBP17.2■□□□□ 0.34
CCHCR1-211ENST00000467553 DBNLQ9UJU6 430 aaKnown RBP17.2■□□□□ 0.34
CCHCR1-211ENST00000467553 MROH7-TTC4A0A0A0MT08 1334 aa17.2■□□□□ 0.34
CCHCR1-211ENST00000467553 RFX7Q2KHR2 1363 aa17.19■□□□□ 0.34
CCHCR1-211ENST00000467553 ATRNL1Q5VV63 1379 aa17.19■□□□□ 0.34
CCHCR1-211ENST00000467553 GPR75-ASB3A0A0A6YYF3 556 aa17.19■□□□□ 0.34
CCHCR1-211ENST00000467553 HOXD10P28358 340 aa17.19■□□□□ 0.34
CCHCR1-211ENST00000467553 FASTKD5Q7L8L6 764 aaKnown RBP17.19■□□□□ 0.34
CCHCR1-211ENST00000467553 SCYL3Q8IZE3 742 aa17.19■□□□□ 0.34
CCHCR1-211ENST00000467553 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
CCHCR1-211ENST00000467553 KIF1BPQ96EK5 621 aa17.19■□□□□ 0.34
CCHCR1-211ENST00000467553 ZNF333Q96JL9 665 aa17.19■□□□□ 0.34
CCHCR1-211ENST00000467553 PICK1Q9NRD5 415 aa17.19■□□□□ 0.34
CCHCR1-211ENST00000467553 BRCA2P51587 3418 aa17.18■□□□□ 0.34
CCHCR1-211ENST00000467553 PHF20L1A8MW92 1017 aa17.18■□□□□ 0.34
CCHCR1-211ENST00000467553 PDHXO00330 501 aa17.18■□□□□ 0.34
CCHCR1-211ENST00000467553 TBC1D12O60347 775 aa17.18■□□□□ 0.34
CCHCR1-211ENST00000467553 CTNND1O60716 968 aaKnown RBP17.18■□□□□ 0.34
CCHCR1-211ENST00000467553 RAB11FIP3O75154 756 aa17.18■□□□□ 0.34
CCHCR1-211ENST00000467553 ZSCAN29Q8IWY8 852 aaPredicted RBP17.18■□□□□ 0.34
CCHCR1-211ENST00000467553 CLASRPQ8N2M8 674 aaKnown RBP17.18■□□□□ 0.34
CCHCR1-211ENST00000467553 PARK7Q99497 189 aaKnown RBP17.18■□□□□ 0.34
CCHCR1-211ENST00000467553 RAI14Q9P0K7 980 aa17.18■□□□□ 0.34
CCHCR1-211ENST00000467553 SLC45A1Q9Y2W3 748 aa17.18■□□□□ 0.34
CCHCR1-211ENST00000467553 MKI67P46013 3256 aaKnown RBP17.17■□□□□ 0.34
CCHCR1-211ENST00000467553 POTEFA5A3E0 1075 aa17.17■□□□□ 0.34
CCHCR1-211ENST00000467553 BTDP43251 543 aa17.17■□□□□ 0.34
CCHCR1-211ENST00000467553 CAP1Q01518 475 aa17.17■□□□□ 0.34
CCHCR1-211ENST00000467553 MECOMQ03112 1051 aa17.17■□□□□ 0.34
CCHCR1-211ENST00000467553 CRBNQ96SW2 442 aa17.17■□□□□ 0.34
CCHCR1-211ENST00000467553 TBC1D2Q9BYX2 928 aa17.17■□□□□ 0.34
CCHCR1-211ENST00000467553 LRP2BPQ9P2M1 347 aa17.17■□□□□ 0.34
CCHCR1-211ENST00000467553 PTCH2Q9Y6C5 1203 aa17.17■□□□□ 0.34
CCHCR1-211ENST00000467553 ZAP70P43403 619 aa17.16■□□□□ 0.34
CCHCR1-211ENST00000467553 ZFPM1Q8IX07 1006 aa17.16■□□□□ 0.34
CCHCR1-211ENST00000467553 PCDH10Q9P2E7 1040 aa17.16■□□□□ 0.34
CCHCR1-211ENST00000467553 COL2A1P02458 1487 aaPredicted RBP17.16■□□□□ 0.34
CCHCR1-211ENST00000467553 A0A0G2JLL6 359 aaPredicted RBP17.15■□□□□ 0.34
CCHCR1-211ENST00000467553 IFIT2P09913 472 aaKnown RBP17.15■□□□□ 0.34
CCHCR1-211ENST00000467553 PTPRAP18433 802 aa17.15■□□□□ 0.34
CCHCR1-211ENST00000467553 MOGSQ13724 837 aa17.15■□□□□ 0.34
CCHCR1-211ENST00000467553 PRRT2Q7Z6L0 340 aaPredicted RBP17.15■□□□□ 0.34
CCHCR1-211ENST00000467553 NSUN4Q96CB9 384 aaKnown RBP17.15■□□□□ 0.34
CCHCR1-211ENST00000467553 ZNF512BQ96KM6 892 aaPredicted RBP17.15■□□□□ 0.34
CCHCR1-211ENST00000467553 AFG3L2Q9Y4W6 797 aa17.15■□□□□ 0.34
CCHCR1-211ENST00000467553 ZHX2Q9Y6X8 837 aa17.15■□□□□ 0.34
CCHCR1-211ENST00000467553 ADGRA2Q96PE1 1338 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms