RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 HYAL2Q12891 473 aa6.88□□□□□ -1.31
EXOSC3-204ENST00000465860 SETDB1Q15047 1291 aa6.88□□□□□ -1.31
EXOSC3-204ENST00000465860 TTC39BQ5VTQ0 682 aaPredicted RBP6.88□□□□□ -1.31
EXOSC3-204ENST00000465860 ATCAYQ86WG3 371 aa6.88□□□□□ -1.31
EXOSC3-204ENST00000465860 PMFBP1Q8TBY8 1022 aa6.88□□□□□ -1.31
EXOSC3-204ENST00000465860 ALX3O95076 343 aa6.87□□□□□ -1.31
EXOSC3-204ENST00000465860 CYP2E1P05181 493 aaPredicted RBP6.87□□□□□ -1.31
EXOSC3-204ENST00000465860 LRRC59Q96AG4 307 aaKnown RBP6.87□□□□□ -1.31
EXOSC3-204ENST00000465860 NUDT16Q96DE0 195 aaKnown RBP6.87□□□□□ -1.31
EXOSC3-204ENST00000465860 ABI2Q9NYB9 513 aaPredicted RBP6.87□□□□□ -1.31
EXOSC3-204ENST00000465860 GTF3C3Q9Y5Q9 886 aa6.87□□□□□ -1.31
EXOSC3-204ENST00000465860 ROCK2O75116 1388 aaKnown RBP6.86□□□□□ -1.31
EXOSC3-204ENST00000465860 GPRASP1Q5JY77 1395 aa6.86□□□□□ -1.31
EXOSC3-204ENST00000465860 SPATA31A6Q5VVP1 1343 aa6.86□□□□□ -1.31
EXOSC3-204ENST00000465860 SCO2A0A1W2PP80 73 aa6.86□□□□□ -1.31
EXOSC3-204ENST00000465860 KIF4AO95239 1232 aa6.86□□□□□ -1.31
EXOSC3-204ENST00000465860 CEP135Q66GS9 1140 aa6.86□□□□□ -1.31
EXOSC3-204ENST00000465860 ADAMTSL4Q6UY14 1074 aa6.86□□□□□ -1.31
EXOSC3-204ENST00000465860 KRT28Q7Z3Y7 464 aa6.86□□□□□ -1.31
EXOSC3-204ENST00000465860 SPACA7Q96KW9 195 aa6.86□□□□□ -1.31
EXOSC3-204ENST00000465860 CDK19Q9BWU1 502 aa6.86□□□□□ -1.31
EXOSC3-204ENST00000465860 RASSF4Q9H2L5 321 aa6.86□□□□□ -1.31
EXOSC3-204ENST00000465860 AKTIPQ9H8T0 292 aa6.86□□□□□ -1.31
EXOSC3-204ENST00000465860 SRA1Q9HD15 236 aaKnown RBP6.86□□□□□ -1.31
EXOSC3-204ENST00000465860 PPME1Q9Y570 386 aa6.86□□□□□ -1.31
EXOSC3-204ENST00000465860 RALGAPBQ86X10 1494 aa6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 ANKARQ7Z5J8 1434 aa6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 TONSLQ96HA7 1378 aa6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 SPATA31A3Q5VYP0 1347 aa6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 NPHP3Q7Z494 1330 aa6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 CENPJQ9HC77 1338 aaPredicted RBP6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 F8W735 103 aaPredicted RBP6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 MAP4K3Q8IVH8 894 aa6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 CACTIN-AS1Q8N1I8 211 aa6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 TMEM130Q8N3G9 435 aa6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 CCDC82Q8N4S0 544 aa6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 HELQQ8TDG4 1101 aa6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 LACRTQ9GZZ8 138 aa6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 MRPL18Q9H0U6 180 aaKnown RBP6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 ELP3Q9H9T3 547 aa6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 TMEM63CQ9P1W3 806 aa6.85□□□□□ -1.31
EXOSC3-204ENST00000465860 TMEM88BA6NKF7 163 aa6.84□□□□□ -1.31
EXOSC3-204ENST00000465860 LINC01387J3KSC0 135 aa6.84□□□□□ -1.31
EXOSC3-204ENST00000465860 PDE12Q6L8Q7 609 aaKnown RBP6.84□□□□□ -1.31
EXOSC3-204ENST00000465860 TXNDC11Q6PKC3 985 aa6.84□□□□□ -1.31
EXOSC3-204ENST00000465860 DZIP1LQ8IYY4 767 aaKnown RBP6.84□□□□□ -1.31
EXOSC3-204ENST00000465860 CEP120Q8N960 986 aa6.84□□□□□ -1.31
EXOSC3-204ENST00000465860 GALNT11Q8NCW6 608 aa6.84□□□□□ -1.31
EXOSC3-204ENST00000465860 MUC3BQ9H195 1237 aa6.84□□□□□ -1.31
EXOSC3-204ENST00000465860 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.84□□□□□ -1.31
EXOSC3-204ENST00000465860 TNS3Q68CZ2 1445 aa6.84□□□□□ -1.32
EXOSC3-204ENST00000465860 PLCH1Q4KWH8 1693 aa6.84□□□□□ -1.32
EXOSC3-204ENST00000465860 AFF2P51816 1311 aa6.83□□□□□ -1.32
EXOSC3-204ENST00000465860 AKAP12Q02952 1782 aa6.83□□□□□ -1.32
EXOSC3-204ENST00000465860 SMNDC1O75940 238 aaKnown RBP eCLIP6.83□□□□□ -1.32
EXOSC3-204ENST00000465860 ARTNQ5T4W7 220 aa6.83□□□□□ -1.32
EXOSC3-204ENST00000465860 AGGF1Q8N302 714 aaeCLIP6.83□□□□□ -1.32
EXOSC3-204ENST00000465860 EDEM1Q92611 657 aa6.83□□□□□ -1.32
EXOSC3-204ENST00000465860 C8orf37Q96NL8 207 aa6.83□□□□□ -1.32
EXOSC3-204ENST00000465860 PBX4Q9BYU1 374 aa6.83□□□□□ -1.32
EXOSC3-204ENST00000465860 CNTN3Q9P232 1028 aa6.83□□□□□ -1.32
EXOSC3-204ENST00000465860 KANSL3Q9P2N6 904 aa6.83□□□□□ -1.32
EXOSC3-204ENST00000465860 PHRF1Q9P1Y6 1649 aaKnown RBP6.83□□□□□ -1.32
EXOSC3-204ENST00000465860 ACEP12821 1306 aa6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 A6NHS1 94 aa6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 TM4SF5O14894 197 aa6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 MPSTP25325 297 aa6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 CDC27P30260 824 aa6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 CDC25BP30305 580 aa6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 DNM1Q05193 864 aaKnown RBP6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 MEX3CQ5U5Q3 659 aaKnown RBP6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 PRR23CQ6ZRP0 262 aa6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 ZNF438Q7Z4V0 828 aa6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 NCAPG2Q86XI2 1143 aa6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 GGNBP2Q9H3C7 697 aa6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 C1orf115Q9H7X2 142 aa6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 ZFP64Q9NPA5 681 aa6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 PPIP5K1Q6PFW1 1433 aa6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 SBNO1A3KN83 1393 aa6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 POLR3AO14802 1390 aaPredicted RBP6.82□□□□□ -1.32
EXOSC3-204ENST00000465860 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 PIK3C2AO00443 1686 aa6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 BCL9LQ86UU0 1499 aa6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 WISP1O95388 367 aa6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 PDGFAP04085 211 aa6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 SSFA2P28290 1259 aa6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 EIF1AXP47813 144 aaKnown RBP6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 NOM1Q5C9Z4 860 aaKnown RBP6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 NUTM2GQ5VZR2 741 aa6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 XKR5Q6UX68 686 aa6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 Q6ZS46 218 aa6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 C1orf127Q8N9H9 656 aa6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 NGDNQ8NEJ9 315 aaKnown RBP6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 GTF3C2Q8WUA4 911 aaPredicted RBP6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 POP1Q99575 1024 aaKnown RBP6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 CARD11Q9BXL7 1154 aa6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 SH2B1Q9NRF2 756 aaPredicted RBP6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 KCNK4Q9NYG8 393 aa6.81□□□□□ -1.32
EXOSC3-204ENST00000465860 SALL4Q9UJQ4 1053 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms