RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 MROH7-TTC4A0A0A0MT08 1334 aa17.94■□□□□ 0.46
ALMS1-202ENST00000464408 CTGFP29279 349 aa17.93■□□□□ 0.46
ALMS1-202ENST00000464408 HNRNPUQ00839 825 aaKnown RBP eCLIP17.93■□□□□ 0.46
ALMS1-202ENST00000464408 ARMC5Q96C12 935 aa17.93■□□□□ 0.46
ALMS1-202ENST00000464408 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.93■□□□□ 0.46
ALMS1-202ENST00000464408 ENTPD3O75355 529 aa17.92■□□□□ 0.46
ALMS1-202ENST00000464408 SLC34A2O95436 690 aa17.92■□□□□ 0.46
ALMS1-202ENST00000464408 MCAMP43121 646 aa17.92■□□□□ 0.46
ALMS1-202ENST00000464408 RHBDL3P58872 404 aa17.92■□□□□ 0.46
ALMS1-202ENST00000464408 LACTBP83111 547 aaPredicted RBP17.92■□□□□ 0.46
ALMS1-202ENST00000464408 ZKSCAN2Q63HK3 967 aa17.92■□□□□ 0.46
ALMS1-202ENST00000464408 SPATA5Q8NB90 893 aa17.92■□□□□ 0.46
ALMS1-202ENST00000464408 FAM163AQ96GL9 167 aaPredicted RBP17.92■□□□□ 0.46
ALMS1-202ENST00000464408 ZCCHC17Q9NP64 241 aaKnown RBP17.92■□□□□ 0.46
ALMS1-202ENST00000464408 CPA4Q9UI42 421 aa17.92■□□□□ 0.46
ALMS1-202ENST00000464408 ADGRA2Q96PE1 1338 aa17.92■□□□□ 0.46
ALMS1-202ENST00000464408 PDHXO00330 501 aa17.91■□□□□ 0.46
ALMS1-202ENST00000464408 RLBP1P12271 317 aa17.91■□□□□ 0.46
ALMS1-202ENST00000464408 ARID4AP29374 1257 aaPredicted RBP17.91■□□□□ 0.46
ALMS1-202ENST00000464408 G3BP1Q13283 466 aaKnown RBP eCLIP17.91■□□□□ 0.46
ALMS1-202ENST00000464408 GORABQ5T7V8 394 aa17.91■□□□□ 0.46
ALMS1-202ENST00000464408 SPTY2D1Q68D10 685 aaPredicted RBP17.91■□□□□ 0.46
ALMS1-202ENST00000464408 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
ALMS1-202ENST00000464408 ANKRD23Q86SG2 305 aa17.91■□□□□ 0.46
ALMS1-202ENST00000464408 CCDC84Q86UT8 332 aaPredicted RBP17.91■□□□□ 0.46
ALMS1-202ENST00000464408 ZSCAN29Q8IWY8 852 aaPredicted RBP17.91■□□□□ 0.46
ALMS1-202ENST00000464408 NSUN4Q96CB9 384 aaKnown RBP17.91■□□□□ 0.46
ALMS1-202ENST00000464408 CDK5RAP2Q96SN8 1893 aa17.9■□□□□ 0.46
ALMS1-202ENST00000464408 MAST2Q6P0Q8 1798 aa17.9■□□□□ 0.46
ALMS1-202ENST00000464408 GPR75-ASB3A0A0A6YYF3 556 aa17.9■□□□□ 0.46
ALMS1-202ENST00000464408 FAM196BA6NMK8 535 aa17.9■□□□□ 0.46
ALMS1-202ENST00000464408 MYCP01106 439 aaPredicted RBP17.9■□□□□ 0.46
ALMS1-202ENST00000464408 EN2P19622 333 aaPredicted RBP17.9■□□□□ 0.46
ALMS1-202ENST00000464408 POLA2Q14181 598 aa17.9■□□□□ 0.46
ALMS1-202ENST00000464408 GPAT2Q6NUI2 795 aa17.9■□□□□ 0.46
ALMS1-202ENST00000464408 C17orf99Q6UX52 265 aa17.9■□□□□ 0.46
ALMS1-202ENST00000464408 ZNF333Q96JL9 665 aa17.9■□□□□ 0.46
ALMS1-202ENST00000464408 ATAD5Q96QE3 1844 aa17.9■□□□□ 0.46
ALMS1-202ENST00000464408 SIPA1L1O43166 1804 aa17.89■□□□□ 0.45
ALMS1-202ENST00000464408 MGAMO43451 1857 aa17.89■□□□□ 0.45
ALMS1-202ENST00000464408 PRPF38BQ5VTL8 546 aaKnown RBP17.89■□□□□ 0.45
ALMS1-202ENST00000464408 SLF2Q8IX21 1173 aa17.89■□□□□ 0.45
ALMS1-202ENST00000464408 SCYL3Q8IZE3 742 aa17.89■□□□□ 0.45
ALMS1-202ENST00000464408 SH3TC2Q8TF17 1288 aa17.89■□□□□ 0.45
ALMS1-202ENST00000464408 SNRKQ9NRH2 765 aa17.89■□□□□ 0.45
ALMS1-202ENST00000464408 ZHX2Q9Y6X8 837 aa17.89■□□□□ 0.45
ALMS1-202ENST00000464408 CYP2C8P10632 490 aa17.88■□□□□ 0.45
ALMS1-202ENST00000464408 PTPRAP18433 802 aa17.88■□□□□ 0.45
ALMS1-202ENST00000464408 MAP3K10Q02779 954 aa17.88■□□□□ 0.45
ALMS1-202ENST00000464408 SLC9C1Q4G0N8 1177 aa17.88■□□□□ 0.45
ALMS1-202ENST00000464408 SSH3Q8TE77 659 aa17.88■□□□□ 0.45
ALMS1-202ENST00000464408 DBNDD2Q9BQY9 259 aa17.88■□□□□ 0.45
ALMS1-202ENST00000464408 RAI14Q9P0K7 980 aa17.88■□□□□ 0.45
ALMS1-202ENST00000464408 ATP8B2P98198 1209 aa17.87■□□□□ 0.45
ALMS1-202ENST00000464408 TNNI3KQ59H18 835 aa17.87■□□□□ 0.45
ALMS1-202ENST00000464408 TRIM47Q96LD4 638 aa17.87■□□□□ 0.45
ALMS1-202ENST00000464408 FPGT-TNNI3KV9GXZ4 949 aa17.87■□□□□ 0.45
ALMS1-202ENST00000464408 A0A0G2JLL6 359 aaPredicted RBP17.86■□□□□ 0.45
ALMS1-202ENST00000464408 CXCL11O14625 94 aa17.86■□□□□ 0.45
ALMS1-202ENST00000464408 KIF22Q14807 665 aa17.86■□□□□ 0.45
ALMS1-202ENST00000464408 DIEXFQ68CQ4 756 aaKnown RBP17.86■□□□□ 0.45
ALMS1-202ENST00000464408 PRRT2Q7Z6L0 340 aaPredicted RBP17.86■□□□□ 0.45
ALMS1-202ENST00000464408 ITPRIPQ8IWB1 547 aa17.86■□□□□ 0.45
ALMS1-202ENST00000464408 PICK1Q9NRD5 415 aa17.86■□□□□ 0.45
ALMS1-202ENST00000464408 TLR7Q9NYK1 1049 aaKnown RBP17.86■□□□□ 0.45
ALMS1-202ENST00000464408 AFG3L2Q9Y4W6 797 aa17.86■□□□□ 0.45
ALMS1-202ENST00000464408 FOCADQ5VW36 1801 aa17.86■□□□□ 0.45
ALMS1-202ENST00000464408 SURF6O75683 361 aaKnown RBP17.85■□□□□ 0.45
ALMS1-202ENST00000464408 UQCRFS1P1P0C7P4 283 aa17.85■□□□□ 0.45
ALMS1-202ENST00000464408 PSMC4P43686 418 aa17.85■□□□□ 0.45
ALMS1-202ENST00000464408 OS9Q13438 667 aaPredicted RBP17.85■□□□□ 0.45
ALMS1-202ENST00000464408 RRP1BQ14684 758 aaKnown RBP17.85■□□□□ 0.45
ALMS1-202ENST00000464408 ARHGEF6Q15052 776 aa17.85■□□□□ 0.45
ALMS1-202ENST00000464408 GADL1Q6ZQY3 521 aa17.85■□□□□ 0.45
ALMS1-202ENST00000464408 ADGRA1Q86SQ6 560 aa17.85■□□□□ 0.45
ALMS1-202ENST00000464408 FTSJ3Q8IY81 847 aaKnown RBP17.85■□□□□ 0.45
ALMS1-202ENST00000464408 SH3RF3Q8TEJ3 882 aaPredicted RBP17.85■□□□□ 0.45
ALMS1-202ENST00000464408 LRP2BPQ9P2M1 347 aa17.85■□□□□ 0.45
ALMS1-202ENST00000464408 TRIM75PA6NK02 468 aa17.84■□□□□ 0.45
ALMS1-202ENST00000464408 ZBTB7BO15156 539 aaPredicted RBP17.84■□□□□ 0.45
ALMS1-202ENST00000464408 BCRP11274 1271 aa17.84■□□□□ 0.45
ALMS1-202ENST00000464408 OSBPP22059 807 aa17.84■□□□□ 0.45
ALMS1-202ENST00000464408 GSTO1P78417 241 aa17.84■□□□□ 0.45
ALMS1-202ENST00000464408 TTC39AQ5SRH9 613 aa17.84■□□□□ 0.45
ALMS1-202ENST00000464408 OSBPL5Q9H0X9 879 aaPredicted RBP17.84■□□□□ 0.45
ALMS1-202ENST00000464408 GPR108Q9NPR9 543 aa17.84■□□□□ 0.45
ALMS1-202ENST00000464408 COL2A1P02458 1487 aaPredicted RBP17.83■□□□□ 0.45
ALMS1-202ENST00000464408 DOCK3Q8IZD9 2030 aa17.83■□□□□ 0.45
ALMS1-202ENST00000464408 CTNND1O60716 968 aaKnown RBP17.83■□□□□ 0.44
ALMS1-202ENST00000464408 NPM3O75607 178 aaKnown RBP17.83■□□□□ 0.44
ALMS1-202ENST00000464408 CYP2E1P05181 493 aaPredicted RBP17.83■□□□□ 0.44
ALMS1-202ENST00000464408 LDHCP07864 332 aa17.83■□□□□ 0.44
ALMS1-202ENST00000464408 NBPF11Q86T75 865 aa17.83■□□□□ 0.44
ALMS1-202ENST00000464408 TEX11Q8IYF3 940 aa17.83■□□□□ 0.44
ALMS1-202ENST00000464408 PARK7Q99497 189 aaKnown RBP17.83■□□□□ 0.44
ALMS1-202ENST00000464408 TMEM106CQ9BVX2 250 aa17.83■□□□□ 0.44
ALMS1-202ENST00000464408 PIH1D3Q9NQM4 214 aaKnown RBP17.83■□□□□ 0.44
ALMS1-202ENST00000464408 AATFQ9NY61 560 aaKnown RBP eCLIP17.83■□□□□ 0.44
ALMS1-202ENST00000464408 SRRDQ9UH36 339 aa17.83■□□□□ 0.44
ALMS1-202ENST00000464408 DBNLQ9UJU6 430 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms