RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 ZSCAN29Q8IWY8 852 aaPredicted RBP20.17■□□□□ 0.82
HLA-DPA1-245ENST00000463066 LCORLQ8N3X6 602 aa20.17■□□□□ 0.82
HLA-DPA1-245ENST00000463066 TGFBRAP1Q8WUH2 860 aa20.17■□□□□ 0.82
HLA-DPA1-245ENST00000463066 CLMNQ96JQ2 1002 aa20.17■□□□□ 0.82
HLA-DPA1-245ENST00000463066 RPAP1Q9BWH6 1393 aaPredicted RBP20.17■□□□□ 0.82
HLA-DPA1-245ENST00000463066 AOC2O75106 756 aa20.16■□□□□ 0.82
HLA-DPA1-245ENST00000463066 LDLRAD1Q5T700 205 aa20.16■□□□□ 0.82
HLA-DPA1-245ENST00000463066 RGMBQ6NW40 437 aa20.16■□□□□ 0.82
HLA-DPA1-245ENST00000463066 ARMC9Q7Z3E5 817 aa20.16■□□□□ 0.82
HLA-DPA1-245ENST00000463066 ZIC5Q96T25 663 aa20.16■□□□□ 0.82
HLA-DPA1-245ENST00000463066 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.16■□□□□ 0.82
HLA-DPA1-245ENST00000463066 ARMT1Q9H993 441 aa20.16■□□□□ 0.82
HLA-DPA1-245ENST00000463066 MBD4O95243 580 aa20.15■□□□□ 0.82
HLA-DPA1-245ENST00000463066 PLCG2P16885 1265 aa20.15■□□□□ 0.82
HLA-DPA1-245ENST00000463066 UBE3CQ15386 1083 aa20.15■□□□□ 0.82
HLA-DPA1-245ENST00000463066 SLC4A8Q2Y0W8 1093 aa20.15■□□□□ 0.82
HLA-DPA1-245ENST00000463066 OSBPL5Q9H0X9 879 aaPredicted RBP20.15■□□□□ 0.82
HLA-DPA1-245ENST00000463066 SAP30BPQ9UHR5 308 aaKnown RBP20.15■□□□□ 0.82
HLA-DPA1-245ENST00000463066 WDR33Q9C0J8 1336 aaKnown RBP20.15■□□□□ 0.82
HLA-DPA1-245ENST00000463066 ATRNL1Q5VV63 1379 aa20.15■□□□□ 0.82
HLA-DPA1-245ENST00000463066 FLT1P17948 1338 aa20.14■□□□□ 0.81
HLA-DPA1-245ENST00000463066 FAM196BA6NMK8 535 aa20.14■□□□□ 0.81
HLA-DPA1-245ENST00000463066 FAM155AB1AL88 458 aaPredicted RBP20.14■□□□□ 0.81
HLA-DPA1-245ENST00000463066 PRKAB2O43741 272 aa20.14■□□□□ 0.81
HLA-DPA1-245ENST00000463066 PPP1R12BO60237 982 aaPredicted RBP20.14■□□□□ 0.81
HLA-DPA1-245ENST00000463066 ZNF157P51786 506 aaPredicted RBP20.14■□□□□ 0.81
HLA-DPA1-245ENST00000463066 MAP3K11Q16584 847 aa20.14■□□□□ 0.81
HLA-DPA1-245ENST00000463066 CSRNP1Q96S65 589 aa20.14■□□□□ 0.81
HLA-DPA1-245ENST00000463066 FSD1Q9BTV5 496 aa20.14■□□□□ 0.81
HLA-DPA1-245ENST00000463066 PUS7LQ9H0K6 701 aaKnown RBP20.14■□□□□ 0.81
HLA-DPA1-245ENST00000463066 RNF113AO15541 343 aaKnown RBP20.13■□□□□ 0.81
HLA-DPA1-245ENST00000463066 NPM3O75607 178 aaKnown RBP20.13■□□□□ 0.81
HLA-DPA1-245ENST00000463066 RASAL3Q86YV0 1011 aa20.13■□□□□ 0.81
HLA-DPA1-245ENST00000463066 OSBP2Q969R2 916 aa20.13■□□□□ 0.81
HLA-DPA1-245ENST00000463066 HHIPL1Q96JK4 782 aa20.13■□□□□ 0.81
HLA-DPA1-245ENST00000463066 USP5P45974 858 aa20.12■□□□□ 0.81
HLA-DPA1-245ENST00000463066 MKRN3Q13064 507 aaKnown RBP20.12■□□□□ 0.81
HLA-DPA1-245ENST00000463066 ZSCAN25Q6NSZ9 544 aa20.12■□□□□ 0.81
HLA-DPA1-245ENST00000463066 TMED8Q6PL24 325 aaPredicted RBP20.12■□□□□ 0.81
HLA-DPA1-245ENST00000463066 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.12■□□□□ 0.81
HLA-DPA1-245ENST00000463066 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.12■□□□□ 0.81
HLA-DPA1-245ENST00000463066 SDR42E1Q8WUS8 393 aa20.12■□□□□ 0.81
HLA-DPA1-245ENST00000463066 SEC62Q99442 399 aaKnown RBP20.12■□□□□ 0.81
HLA-DPA1-245ENST00000463066 OSBPL3Q9H4L5 887 aa20.12■□□□□ 0.81
HLA-DPA1-245ENST00000463066 PALD1Q9ULE6 856 aa20.12■□□□□ 0.81
HLA-DPA1-245ENST00000463066 M0R2C6 588 aa20.11■□□□□ 0.81
HLA-DPA1-245ENST00000463066 SLC10A3P09131 477 aa20.11■□□□□ 0.81
HLA-DPA1-245ENST00000463066 INPP5BP32019 993 aa20.11■□□□□ 0.81
HLA-DPA1-245ENST00000463066 IREB2P48200 963 aaKnown RBP20.11■□□□□ 0.81
HLA-DPA1-245ENST00000463066 EVX2Q03828 476 aa20.11■□□□□ 0.81
HLA-DPA1-245ENST00000463066 CNKSR2Q8WXI2 1034 aa20.11■□□□□ 0.81
HLA-DPA1-245ENST00000463066 ZKSCAN4Q969J2 545 aaPredicted RBP20.11■□□□□ 0.81
HLA-DPA1-245ENST00000463066 ZNF341Q9BYN7 854 aa20.11■□□□□ 0.81
HLA-DPA1-245ENST00000463066 ELP3Q9H9T3 547 aa20.11■□□□□ 0.81
HLA-DPA1-245ENST00000463066 CEP350Q5VT06 3117 aa20.1■□□□□ 0.81
HLA-DPA1-245ENST00000463066 ECE1P42892 770 aa20.1■□□□□ 0.81
HLA-DPA1-245ENST00000463066 MAP3K9P80192 1104 aa20.1■□□□□ 0.81
HLA-DPA1-245ENST00000463066 DCAF15Q66K64 600 aa20.1■□□□□ 0.81
HLA-DPA1-245ENST00000463066 CENPQQ7L2Z9 268 aaPredicted RBP20.1■□□□□ 0.81
HLA-DPA1-245ENST00000463066 JMYQ8N9B5 988 aa20.1■□□□□ 0.81
HLA-DPA1-245ENST00000463066 APPBP2Q92624 585 aa20.1■□□□□ 0.81
HLA-DPA1-245ENST00000463066 EVI5LQ96CN4 794 aa20.1■□□□□ 0.81
HLA-DPA1-245ENST00000463066 CCDC136Q96JN2 1154 aa20.1■□□□□ 0.81
HLA-DPA1-245ENST00000463066 WRNIP1Q96S55 665 aa20.1■□□□□ 0.81
HLA-DPA1-245ENST00000463066 TRIM6-TRIM34B2RNG4 842 aa20.09■□□□□ 0.81
HLA-DPA1-245ENST00000463066 GJA5P36382 358 aa20.09■□□□□ 0.81
HLA-DPA1-245ENST00000463066 VGLL4Q14135 290 aa20.09■□□□□ 0.81
HLA-DPA1-245ENST00000463066 RILPL2Q969X0 211 aa20.09■□□□□ 0.81
HLA-DPA1-245ENST00000463066 CRNKL1Q9BZJ0 848 aaKnown RBP20.09■□□□□ 0.81
HLA-DPA1-245ENST00000463066 COL2A1P02458 1487 aaPredicted RBP20.08■□□□□ 0.81
HLA-DPA1-245ENST00000463066 CYP2D6P10635 497 aa20.08■□□□□ 0.81
HLA-DPA1-245ENST00000463066 GSPT1P15170 499 aaKnown RBP20.08■□□□□ 0.81
HLA-DPA1-245ENST00000463066 KIF23Q02241 960 aaPredicted RBP20.08■□□□□ 0.81
HLA-DPA1-245ENST00000463066 RRP1BQ14684 758 aaKnown RBP20.08■□□□□ 0.81
HLA-DPA1-245ENST00000463066 ZMYM1Q5SVZ6 1142 aa20.08■□□□□ 0.81
HLA-DPA1-245ENST00000463066 ANKRD13AQ8IZ07 590 aa20.08■□□□□ 0.81
HLA-DPA1-245ENST00000463066 CCDC102AQ96A19 550 aa20.08■□□□□ 0.81
HLA-DPA1-245ENST00000463066 AIDAQ96BJ3 306 aa20.08■□□□□ 0.81
HLA-DPA1-245ENST00000463066 HOOK2Q96ED9 719 aa20.08■□□□□ 0.81
HLA-DPA1-245ENST00000463066 SLC10A4Q96EP9 437 aa20.08■□□□□ 0.81
HLA-DPA1-245ENST00000463066 STRBPQ96SI9 672 aaKnown RBP20.08■□□□□ 0.81
HLA-DPA1-245ENST00000463066 ZNF112Q9UJU3 913 aa20.08■□□□□ 0.81
HLA-DPA1-245ENST00000463066 SNCAIPQ9Y6H5 919 aa20.08■□□□□ 0.81
HLA-DPA1-245ENST00000463066 CDK5RAP2Q96SN8 1893 aa20.07■□□□□ 0.8
HLA-DPA1-245ENST00000463066 PHF20L1A8MW92 1017 aa20.07■□□□□ 0.8
HLA-DPA1-245ENST00000463066 SMIM22K7EJ46 135 aa20.07■□□□□ 0.8
HLA-DPA1-245ENST00000463066 ZFYP08048 801 aaPredicted RBP20.07■□□□□ 0.8
HLA-DPA1-245ENST00000463066 CCDC129Q6ZRS4 1044 aa20.07■□□□□ 0.8
HLA-DPA1-245ENST00000463066 CERS3Q8IU89 383 aa20.07■□□□□ 0.8
HLA-DPA1-245ENST00000463066 DNAJC18Q9H819 358 aa20.07■□□□□ 0.8
HLA-DPA1-245ENST00000463066 SLC4A4Q9Y6R1 1079 aa20.07■□□□□ 0.8
HLA-DPA1-245ENST00000463066 OTOFQ9HC10 1997 aa20.06■□□□□ 0.8
HLA-DPA1-245ENST00000463066 MAP3K10Q02779 954 aa20.06■□□□□ 0.8
HLA-DPA1-245ENST00000463066 TTC22Q5TAA0 569 aa20.06■□□□□ 0.8
HLA-DPA1-245ENST00000463066 SPRYD7Q5W111 196 aa20.06■□□□□ 0.8
HLA-DPA1-245ENST00000463066 WNK4Q96J92 1243 aa20.06■□□□□ 0.8
HLA-DPA1-245ENST00000463066 FAM227BQ96M60 508 aa20.06■□□□□ 0.8
HLA-DPA1-245ENST00000463066 DCP1AQ9NPI6 582 aaPredicted RBP20.06■□□□□ 0.8
HLA-DPA1-245ENST00000463066 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.06■□□□□ 0.8
HLA-DPA1-245ENST00000463066 MYH7P12883 1935 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms