RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 TEX11Q8IYF3 940 aa22.93■■□□□ 1.26
COL9A3-203ENST00000462700 SH3RF3Q8TEJ3 882 aaPredicted RBP22.93■■□□□ 1.26
COL9A3-203ENST00000462700 WRNIP1Q96S55 665 aa22.93■■□□□ 1.26
COL9A3-203ENST00000462700 ELP3Q9H9T3 547 aa22.93■■□□□ 1.26
COL9A3-203ENST00000462700 PRDM10Q9NQV6 1147 aa22.93■■□□□ 1.26
COL9A3-203ENST00000462700 TSKSQ9UJT2 592 aa22.93■■□□□ 1.26
COL9A3-203ENST00000462700 CSADQ9Y600 493 aa22.93■■□□□ 1.26
COL9A3-203ENST00000462700 DOCK2Q92608 1830 aa22.92■■□□□ 1.26
COL9A3-203ENST00000462700 GOLIM4O00461 696 aa22.92■■□□□ 1.26
COL9A3-203ENST00000462700 PLCG2P16885 1265 aa22.92■■□□□ 1.26
COL9A3-203ENST00000462700 CYP7A1P22680 504 aa22.92■■□□□ 1.26
COL9A3-203ENST00000462700 TMED8Q6PL24 325 aaPredicted RBP22.92■■□□□ 1.26
COL9A3-203ENST00000462700 ZSCAN29Q8IWY8 852 aaPredicted RBP22.92■■□□□ 1.26
COL9A3-203ENST00000462700 MAGEB6Q8N7X4 407 aa22.92■■□□□ 1.26
COL9A3-203ENST00000462700 BOLA2Q9H3K6 86 aa22.92■■□□□ 1.26
COL9A3-203ENST00000462700 SAGE1Q9NXZ1 904 aa22.92■■□□□ 1.26
COL9A3-203ENST00000462700 DDTLA6NHG4 134 aaPredicted RBP22.91■■□□□ 1.26
COL9A3-203ENST00000462700 GJA5P36382 358 aa22.91■■□□□ 1.26
COL9A3-203ENST00000462700 TM4SF4P48230 202 aa22.91■■□□□ 1.26
COL9A3-203ENST00000462700 SREBF2Q12772 1141 aa22.91■■□□□ 1.26
COL9A3-203ENST00000462700 OPTNQ96CV9 577 aa22.91■■□□□ 1.26
COL9A3-203ENST00000462700 RNF186Q9NXI6 227 aa22.91■■□□□ 1.26
COL9A3-203ENST00000462700 MYO5AQ9Y4I1 1855 aaKnown RBP22.91■■□□□ 1.26
COL9A3-203ENST00000462700 HDAC1Q13547 482 aaPredicted RBP22.9■■□□□ 1.26
COL9A3-203ENST00000462700 ZKSCAN4Q969J2 545 aaPredicted RBP22.9■■□□□ 1.26
COL9A3-203ENST00000462700 EDC3Q96F86 508 aaKnown RBP22.9■■□□□ 1.26
COL9A3-203ENST00000462700 HAUS7Q99871 368 aa22.9■■□□□ 1.26
COL9A3-203ENST00000462700 OSBPL5Q9H0X9 879 aaPredicted RBP22.9■■□□□ 1.26
COL9A3-203ENST00000462700 PAG1Q9NWQ8 432 aa22.9■■□□□ 1.26
COL9A3-203ENST00000462700 ZNF112Q9UJU3 913 aa22.9■■□□□ 1.26
COL9A3-203ENST00000462700 SNCAIPQ9Y6H5 919 aa22.9■■□□□ 1.26
COL9A3-203ENST00000462700 COL2A1P02458 1487 aaPredicted RBP22.9■■□□□ 1.26
COL9A3-203ENST00000462700 MANSC4A6NHS7 340 aaPredicted RBP22.89■■□□□ 1.25
COL9A3-203ENST00000462700 DYNLL1P63167 89 aaKnown RBP22.89■■□□□ 1.25
COL9A3-203ENST00000462700 EXOC6Q8TAG9 804 aa22.89■■□□□ 1.25
COL9A3-203ENST00000462700 ECHDC1Q9NTX5 307 aa22.89■■□□□ 1.25
COL9A3-203ENST00000462700 TRPA1O75762 1119 aa22.88■■□□□ 1.25
COL9A3-203ENST00000462700 INPP5BP32019 993 aa22.88■■□□□ 1.25
COL9A3-203ENST00000462700 MIGA1Q8NAN2 632 aa22.88■■□□□ 1.25
COL9A3-203ENST00000462700 CNKSR2Q8WXI2 1034 aa22.88■■□□□ 1.25
COL9A3-203ENST00000462700 SPDYE5A6NIY4 337 aa22.87■■□□□ 1.25
COL9A3-203ENST00000462700 PDE6AP16499 860 aa22.87■■□□□ 1.25
COL9A3-203ENST00000462700 MAP3K10Q02779 954 aa22.87■■□□□ 1.25
COL9A3-203ENST00000462700 SLC9C2Q5TAH2 1124 aa22.87■■□□□ 1.25
COL9A3-203ENST00000462700 CERS3Q8IU89 383 aa22.87■■□□□ 1.25
COL9A3-203ENST00000462700 TGFBRAP1Q8WUH2 860 aa22.87■■□□□ 1.25
COL9A3-203ENST00000462700 GPATCH3Q96I76 525 aa22.87■■□□□ 1.25
COL9A3-203ENST00000462700 FLT1P17948 1338 aa22.86■■□□□ 1.25
COL9A3-203ENST00000462700 INHBEP58166 350 aa22.86■■□□□ 1.25
COL9A3-203ENST00000462700 ERO1BQ86YB8 467 aa22.86■■□□□ 1.25
COL9A3-203ENST00000462700 GCC1Q96CN9 775 aa22.86■■□□□ 1.25
COL9A3-203ENST00000462700 OTUD5Q96G74 571 aa22.86■■□□□ 1.25
COL9A3-203ENST00000462700 LAMB1P07942 1786 aa22.86■■□□□ 1.25
COL9A3-203ENST00000462700 PHF20L1A8MW92 1017 aa22.85■■□□□ 1.25
COL9A3-203ENST00000462700 SLURP2P0DP57 97 aa22.85■■□□□ 1.25
COL9A3-203ENST00000462700 NOL9Q5SY16 702 aaKnown RBP22.85■■□□□ 1.25
COL9A3-203ENST00000462700 MAPKAPK5Q8IW41 473 aa22.85■■□□□ 1.25
COL9A3-203ENST00000462700 ZNF532Q9HCE3 1301 aa22.84■■□□□ 1.25
COL9A3-203ENST00000462700 TCRBV5S4A2TA0A5A2 114 aa22.84■■□□□ 1.25
COL9A3-203ENST00000462700 TBC1D12O60347 775 aa22.84■■□□□ 1.25
COL9A3-203ENST00000462700 TSHZ3Q63HK5 1081 aa22.84■■□□□ 1.25
COL9A3-203ENST00000462700 RIOK1Q9BRS2 568 aaKnown RBP22.84■■□□□ 1.25
COL9A3-203ENST00000462700 AK9Q5TCS8 1911 aa22.83■■□□□ 1.25
COL9A3-203ENST00000462700 TESPA1A2RU30 521 aaPredicted RBP22.83■■□□□ 1.25
COL9A3-203ENST00000462700 IFNL1Q8IU54 200 aa22.83■■□□□ 1.25
COL9A3-203ENST00000462700 MS4A4AQ96JQ5 239 aa22.83■■□□□ 1.25
COL9A3-203ENST00000462700 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.83■■□□□ 1.25
COL9A3-203ENST00000462700 DHX36Q9H2U1 1008 aaKnown RBP22.83■■□□□ 1.25
COL9A3-203ENST00000462700 TTC41PQ6P2S7 1318 aa22.82■■□□□ 1.24
COL9A3-203ENST00000462700 MAGEB6P1A0A0J9YX57 407 aa22.82■■□□□ 1.24
COL9A3-203ENST00000462700 IGF2BP3O00425 579 aaKnown RBP eCLIP22.82■■□□□ 1.24
COL9A3-203ENST00000462700 ADD2P35612 726 aa22.82■■□□□ 1.24
COL9A3-203ENST00000462700 GTF2A2P52657 109 aa22.82■■□□□ 1.24
COL9A3-203ENST00000462700 PPIL2Q13356 520 aa22.82■■□□□ 1.24
COL9A3-203ENST00000462700 ANKRD45Q5TZF3 282 aa22.82■■□□□ 1.24
COL9A3-203ENST00000462700 OTUD7AQ8TE49 926 aaPredicted RBP22.82■■□□□ 1.24
COL9A3-203ENST00000462700 FOCADQ5VW36 1801 aa22.81■■□□□ 1.24
COL9A3-203ENST00000462700 FAM196BA6NMK8 535 aa22.81■■□□□ 1.24
COL9A3-203ENST00000462700 ALDH1A1P00352 501 aa22.81■■□□□ 1.24
COL9A3-203ENST00000462700 USP5P45974 858 aa22.81■■□□□ 1.24
COL9A3-203ENST00000462700 PPATQ06203 517 aa22.81■■□□□ 1.24
COL9A3-203ENST00000462700 SCYL3Q8IZE3 742 aa22.81■■□□□ 1.24
COL9A3-203ENST00000462700 RWDD1Q9H446 243 aaPredicted RBP22.81■■□□□ 1.24
COL9A3-203ENST00000462700 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.81■■□□□ 1.24
COL9A3-203ENST00000462700 PI4KBQ9UBF8 816 aa22.81■■□□□ 1.24
COL9A3-203ENST00000462700 ZBTB47Q9UFB7 747 aaPredicted RBP22.81■■□□□ 1.24
COL9A3-203ENST00000462700 IRF6O14896 467 aa22.8■■□□□ 1.24
COL9A3-203ENST00000462700 TBC1D8O95759 1140 aa22.8■■□□□ 1.24
COL9A3-203ENST00000462700 TNS4Q8IZW8 715 aa22.8■■□□□ 1.24
COL9A3-203ENST00000462700 PTPN18Q99952 460 aa22.8■■□□□ 1.24
COL9A3-203ENST00000462700 CFHR5Q9BXR6 569 aa22.8■■□□□ 1.24
COL9A3-203ENST00000462700 HERC5Q9UII4 1024 aaKnown RBP22.8■■□□□ 1.24
COL9A3-203ENST00000462700 SALL3Q9BXA9 1300 aa22.8■■□□□ 1.24
COL9A3-203ENST00000462700 CDK5RAP2Q96SN8 1893 aa22.79■■□□□ 1.24
COL9A3-203ENST00000462700 CCL15-CCL14A0A0B4J2E2 113 aa22.79■■□□□ 1.24
COL9A3-203ENST00000462700 CTNND1O60716 968 aaKnown RBP22.79■■□□□ 1.24
COL9A3-203ENST00000462700 MX1P20591 662 aa22.79■■□□□ 1.24
COL9A3-203ENST00000462700 CCL15Q16663 113 aa22.79■■□□□ 1.24
COL9A3-203ENST00000462700 SLFNL1Q499Z3 407 aa22.79■■□□□ 1.24
COL9A3-203ENST00000462700 PI4K2BQ8TCG2 481 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms