RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 DDTLA6NHG4 134 aaPredicted RBP19.92■□□□□ 0.78
COL7A1-204ENST00000462475 MECOMQ03112 1051 aa19.92■□□□□ 0.78
COL7A1-204ENST00000462475 PICALMQ13492 652 aa19.92■□□□□ 0.78
COL7A1-204ENST00000462475 SPTY2D1Q68D10 685 aaPredicted RBP19.92■□□□□ 0.78
COL7A1-204ENST00000462475 GPAT2Q6NUI2 795 aa19.92■□□□□ 0.78
COL7A1-204ENST00000462475 PI16Q6UXB8 463 aa19.92■□□□□ 0.78
COL7A1-204ENST00000462475 ZSCAN29Q8IWY8 852 aaPredicted RBP19.92■□□□□ 0.78
COL7A1-204ENST00000462475 SLF2Q8IX21 1173 aa19.92■□□□□ 0.78
COL7A1-204ENST00000462475 SCYL3Q8IZE3 742 aa19.92■□□□□ 0.78
COL7A1-204ENST00000462475 ZNF384Q8TF68 577 aa19.92■□□□□ 0.78
COL7A1-204ENST00000462475 FAM163AQ96GL9 167 aaPredicted RBP19.92■□□□□ 0.78
COL7A1-204ENST00000462475 TRIM47Q96LD4 638 aa19.92■□□□□ 0.78
COL7A1-204ENST00000462475 CXCL11O14625 94 aa19.91■□□□□ 0.78
COL7A1-204ENST00000462475 BCAR3O75815 825 aa19.91■□□□□ 0.78
COL7A1-204ENST00000462475 GNRH1P01148 92 aa19.91■□□□□ 0.78
COL7A1-204ENST00000462475 PSMC4P43686 418 aa19.91■□□□□ 0.78
COL7A1-204ENST00000462475 SLC4A8Q2Y0W8 1093 aa19.91■□□□□ 0.78
COL7A1-204ENST00000462475 FRAT1Q92837 279 aaPredicted RBP19.91■□□□□ 0.78
COL7A1-204ENST00000462475 NEUROD6Q96NK8 337 aa19.91■□□□□ 0.78
COL7A1-204ENST00000462475 HMG20BQ9P0W2 317 aa19.91■□□□□ 0.78
COL7A1-204ENST00000462475 PNMA6EA0A0J9YXQ4 647 aa19.9■□□□□ 0.78
COL7A1-204ENST00000462475 IPO8O15397 1037 aaKnown RBP19.9■□□□□ 0.78
COL7A1-204ENST00000462475 GNAI2P04899 355 aa19.9■□□□□ 0.78
COL7A1-204ENST00000462475 CYP2C8P10632 490 aa19.9■□□□□ 0.78
COL7A1-204ENST00000462475 PTPRAP18433 802 aa19.9■□□□□ 0.78
COL7A1-204ENST00000462475 PRMT2P55345 433 aa19.9■□□□□ 0.78
COL7A1-204ENST00000462475 RHBDL3P58872 404 aa19.9■□□□□ 0.78
COL7A1-204ENST00000462475 MAP3K10Q02779 954 aa19.9■□□□□ 0.78
COL7A1-204ENST00000462475 ATF7IPQ6VMQ6 1270 aa19.9■□□□□ 0.78
COL7A1-204ENST00000462475 ERICH6Q7L0X2 663 aa19.9■□□□□ 0.78
COL7A1-204ENST00000462475 CLUAP1Q96AJ1 413 aa19.9■□□□□ 0.78
COL7A1-204ENST00000462475 PARK7Q99497 189 aaKnown RBP19.9■□□□□ 0.78
COL7A1-204ENST00000462475 PICK1Q9NRD5 415 aa19.9■□□□□ 0.78
COL7A1-204ENST00000462475 ZHX2Q9Y6X8 837 aa19.9■□□□□ 0.78
COL7A1-204ENST00000462475 GPR75-ASB3A0A0A6YYF3 556 aa19.89■□□□□ 0.77
COL7A1-204ENST00000462475 A0A0G2JLL6 359 aaPredicted RBP19.89■□□□□ 0.77
COL7A1-204ENST00000462475 OSBPP22059 807 aa19.89■□□□□ 0.77
COL7A1-204ENST00000462475 TBC1D9Q6ZT07 1266 aa19.89■□□□□ 0.77
COL7A1-204ENST00000462475 PRRT2Q7Z6L0 340 aaPredicted RBP19.89■□□□□ 0.77
COL7A1-204ENST00000462475 SPATA5Q8NB90 893 aa19.89■□□□□ 0.77
COL7A1-204ENST00000462475 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.89■□□□□ 0.77
COL7A1-204ENST00000462475 SRRDQ9UH36 339 aa19.89■□□□□ 0.77
COL7A1-204ENST00000462475 FMNL1O95466 1100 aaPredicted RBP19.88■□□□□ 0.77
COL7A1-204ENST00000462475 BCRP11274 1271 aa19.88■□□□□ 0.77
COL7A1-204ENST00000462475 AFG3L2Q9Y4W6 797 aa19.88■□□□□ 0.77
COL7A1-204ENST00000462475 ARID4AP29374 1257 aaPredicted RBP19.87■□□□□ 0.77
COL7A1-204ENST00000462475 GORABQ5T7V8 394 aa19.87■□□□□ 0.77
COL7A1-204ENST00000462475 CCDC84Q86UT8 332 aaPredicted RBP19.87■□□□□ 0.77
COL7A1-204ENST00000462475 NSUN4Q96CB9 384 aaKnown RBP19.87■□□□□ 0.77
COL7A1-204ENST00000462475 GCC1Q96CN9 775 aa19.87■□□□□ 0.77
COL7A1-204ENST00000462475 MYPNQ86TC9 1320 aa19.86■□□□□ 0.77
COL7A1-204ENST00000462475 FAM196BA6NMK8 535 aa19.86■□□□□ 0.77
COL7A1-204ENST00000462475 CTNND1O60716 968 aaKnown RBP19.86■□□□□ 0.77
COL7A1-204ENST00000462475 MCAMP43121 646 aa19.86■□□□□ 0.77
COL7A1-204ENST00000462475 MTFR1Q15390 333 aa19.86■□□□□ 0.77
COL7A1-204ENST00000462475 GADL1Q6ZQY3 521 aa19.86■□□□□ 0.77
COL7A1-204ENST00000462475 DOCK1Q14185 1865 aa19.86■□□□□ 0.77
COL7A1-204ENST00000462475 TRIM75PA6NK02 468 aa19.85■□□□□ 0.77
COL7A1-204ENST00000462475 HOXD10P28358 340 aa19.85■□□□□ 0.77
COL7A1-204ENST00000462475 PRKCZQ05513 592 aa19.85■□□□□ 0.77
COL7A1-204ENST00000462475 G3BP1Q13283 466 aaKnown RBP eCLIP19.85■□□□□ 0.77
COL7A1-204ENST00000462475 FASTKD5Q7L8L6 764 aaKnown RBP19.85■□□□□ 0.77
COL7A1-204ENST00000462475 TMEM57Q8N5G2 664 aa19.85■□□□□ 0.77
COL7A1-204ENST00000462475 RAET1EQ8TD07 263 aa19.85■□□□□ 0.77
COL7A1-204ENST00000462475 SHISA4Q96DD7 197 aa19.85■□□□□ 0.77
COL7A1-204ENST00000462475 RAI14Q9P0K7 980 aa19.85■□□□□ 0.77
COL7A1-204ENST00000462475 PCDH10Q9P2E7 1040 aa19.85■□□□□ 0.77
COL7A1-204ENST00000462475 NPM3O75607 178 aaKnown RBP19.84■□□□□ 0.77
COL7A1-204ENST00000462475 GRK4P32298 578 aa19.84■□□□□ 0.77
COL7A1-204ENST00000462475 GSTO1P78417 241 aa19.84■□□□□ 0.77
COL7A1-204ENST00000462475 HABP4Q5JVS0 413 aaKnown RBP19.84■□□□□ 0.77
COL7A1-204ENST00000462475 TBC1D12O60347 775 aa19.83■□□□□ 0.77
COL7A1-204ENST00000462475 LDHCP07864 332 aa19.83■□□□□ 0.77
COL7A1-204ENST00000462475 FCGRTP55899 365 aa19.83■□□□□ 0.77
COL7A1-204ENST00000462475 OSBPL5Q9H0X9 879 aaPredicted RBP19.83■□□□□ 0.77
COL7A1-204ENST00000462475 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.83■□□□□ 0.77
COL7A1-204ENST00000462475 SLC45A1Q9Y2W3 748 aa19.83■□□□□ 0.77
COL7A1-204ENST00000462475 COL2A1P02458 1487 aaPredicted RBP19.83■□□□□ 0.76
COL7A1-204ENST00000462475 PHIPQ8WWQ0 1821 aa19.82■□□□□ 0.76
COL7A1-204ENST00000462475 POLA2Q14181 598 aa19.82■□□□□ 0.76
COL7A1-204ENST00000462475 ZKSCAN2Q63HK3 967 aa19.82■□□□□ 0.76
COL7A1-204ENST00000462475 GABRQQ9UN88 632 aa19.82■□□□□ 0.76
COL7A1-204ENST00000462475 PTPRFP10586 1907 aa19.82■□□□□ 0.76
COL7A1-204ENST00000462475 MAP4K4O95819 1239 aaPredicted RBP19.81■□□□□ 0.76
COL7A1-204ENST00000462475 UQCRFS1P1P0C7P4 283 aa19.81■□□□□ 0.76
COL7A1-204ENST00000462475 TNNI3KQ59H18 835 aa19.81■□□□□ 0.76
COL7A1-204ENST00000462475 TREML2Q5T2D2 321 aa19.81■□□□□ 0.76
COL7A1-204ENST00000462475 TEX11Q8IYF3 940 aa19.81■□□□□ 0.76
COL7A1-204ENST00000462475 C1orf115Q9H7X2 142 aa19.81■□□□□ 0.76
COL7A1-204ENST00000462475 SNRKQ9NRH2 765 aa19.81■□□□□ 0.76
COL7A1-204ENST00000462475 LRP2BPQ9P2M1 347 aa19.81■□□□□ 0.76
COL7A1-204ENST00000462475 AGTPBP1Q9UPW5 1226 aa19.81■□□□□ 0.76
COL7A1-204ENST00000462475 FPGT-TNNI3KV9GXZ4 949 aa19.81■□□□□ 0.76
COL7A1-204ENST00000462475 CCL5P13501 91 aa19.8■□□□□ 0.76
COL7A1-204ENST00000462475 RRP1BQ14684 758 aaKnown RBP19.8■□□□□ 0.76
COL7A1-204ENST00000462475 SH3RF3Q8TEJ3 882 aaPredicted RBP19.8■□□□□ 0.76
COL7A1-204ENST00000462475 SMCR8Q8TEV9 937 aaPredicted RBP19.8■□□□□ 0.76
COL7A1-204ENST00000462475 DBNDD2Q9BQY9 259 aa19.8■□□□□ 0.76
COL7A1-204ENST00000462475 OS9Q13438 667 aaPredicted RBP19.79■□□□□ 0.76
COL7A1-204ENST00000462475 TTC39AQ5SRH9 613 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms