RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 EVC2Q86UK5 1308 aa6.24□□□□□ -1.41
CSMD3-205ENST00000462254 CNTNAP5Q8WYK1 1306 aa6.24□□□□□ -1.41
CSMD3-205ENST00000462254 KIF1AQ12756 1690 aa6.23□□□□□ -1.41
CSMD3-205ENST00000462254 MAP2P11137 1827 aaKnown RBP6.23□□□□□ -1.41
CSMD3-205ENST00000462254 J3QW42 95 aa6.23□□□□□ -1.41
CSMD3-205ENST00000462254 ALAS2P22557 587 aa6.23□□□□□ -1.41
CSMD3-205ENST00000462254 COL13A1Q5TAT6 717 aaPredicted RBP6.23□□□□□ -1.41
CSMD3-205ENST00000462254 C9orf131Q5VYM1 1079 aa6.23□□□□□ -1.41
CSMD3-205ENST00000462254 DIEXFQ68CQ4 756 aaKnown RBP6.23□□□□□ -1.41
CSMD3-205ENST00000462254 PDE12Q6L8Q7 609 aaKnown RBP6.23□□□□□ -1.41
CSMD3-205ENST00000462254 C8orf86Q6ZUL3 223 aa6.23□□□□□ -1.41
CSMD3-205ENST00000462254 NOL8Q76FK4 1167 aaKnown RBP6.23□□□□□ -1.41
CSMD3-205ENST00000462254 METTL16Q86W50 562 aaKnown RBP6.23□□□□□ -1.41
CSMD3-205ENST00000462254 CERS3Q8IU89 383 aa6.23□□□□□ -1.41
CSMD3-205ENST00000462254 NSUN5Q96P11 429 aaKnown RBP6.23□□□□□ -1.41
CSMD3-205ENST00000462254 RRAGCQ9HB90 399 aa6.23□□□□□ -1.41
CSMD3-205ENST00000462254 PRKAG2Q9UGJ0 569 aa6.23□□□□□ -1.41
CSMD3-205ENST00000462254 ZNF335Q9H4Z2 1342 aaPredicted RBP6.23□□□□□ -1.41
CSMD3-205ENST00000462254 PRR36Q9H6K5 1346 aa6.23□□□□□ -1.41
CSMD3-205ENST00000462254 TRPM3Q9HCF6 1732 aaPredicted RBP6.22□□□□□ -1.41
CSMD3-205ENST00000462254 FAM181BA6NEQ2 426 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 MARCH6O60337 910 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 ALBP02768 609 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 CPB1P15086 417 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 PCSK2P16519 638 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 ATP2B1P20020 1258 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 DGKGP49619 791 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 FGD1P98174 961 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 TTC39BQ5VTQ0 682 aaPredicted RBP6.22□□□□□ -1.41
CSMD3-205ENST00000462254 XKR5Q6UX68 686 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 FAM35AQ86V20 835 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 NT5DC4Q86YG4 428 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 C1orf127Q8N9H9 656 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 OR13H1Q8NG92 308 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 CDK19Q9BWU1 502 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 TGIF2Q9GZN2 237 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 METTL5Q9NRN9 209 aaKnown RBP6.22□□□□□ -1.41
CSMD3-205ENST00000462254 ABI2Q9NYB9 513 aaPredicted RBP6.22□□□□□ -1.41
CSMD3-205ENST00000462254 USP54Q70EL1 1684 aa6.22□□□□□ -1.41
CSMD3-205ENST00000462254 TMEM94Q12767 1356 aa6.21□□□□□ -1.41
CSMD3-205ENST00000462254 PIK3C2AO00443 1686 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 M0R082 166 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 TNFRSF21O75509 655 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 RPLP1P05386 114 aaKnown RBP6.21□□□□□ -1.42
CSMD3-205ENST00000462254 P4HBP07237 508 aaKnown RBP6.21□□□□□ -1.42
CSMD3-205ENST00000462254 PSAPP07602 524 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 USP5P45974 858 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 NRLP54845 237 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 GPLD1P80108 840 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 PLAURQ03405 335 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 PERM1Q5SV97 790 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 LINC00114Q6XXX2 140 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 C20orf204Q6ZNR8 217 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 MICALL1Q8N3F8 863 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 TTC16Q8NEE8 873 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 ZNF417Q8TAU3 575 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 NUDT8Q8WV74 236 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 ZNF587Q96SQ5 575 aaPredicted RBP6.21□□□□□ -1.42
CSMD3-205ENST00000462254 FOXD3Q9UJU5 478 aaPredicted RBP6.21□□□□□ -1.42
CSMD3-205ENST00000462254 PPIP5K1Q6PFW1 1433 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 ANKARQ7Z5J8 1434 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 NHSL1Q5SYE7 1610 aa6.21□□□□□ -1.42
CSMD3-205ENST00000462254 A0A1W2PP64 1363 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 CRYBG1Q9Y4K1 1723 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 DCCP43146 1447 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 NCOA3Q9Y6Q9 1424 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 LOC102724428A0A0B4J2F2 783 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 NDUFB5O43674 189 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 IGHA2P01877 340 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 SOX18P35713 384 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 SIK1P57059 783 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 COL9A3Q14050 684 aaPredicted RBP6.2□□□□□ -1.42
CSMD3-205ENST00000462254 CCDC144BQ3MJ40 725 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 EGFLAMQ63HQ2 1017 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 PSAPL1Q6NUJ1 521 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 GMLQ99445 158 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 RBCK1Q9BYM8 510 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 CHRDQ9H2X0 955 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 SLC12A5Q9H2X9 1139 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 KANSL3Q9P2N6 904 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 ALS2Q96Q42 1657 aa6.2□□□□□ -1.42
CSMD3-205ENST00000462254 ANKRD36BQ8N2N9 1353 aa6.19□□□□□ -1.42
CSMD3-205ENST00000462254 NINLQ9Y2I6 1382 aa6.19□□□□□ -1.42
CSMD3-205ENST00000462254 LTN1O94822 1766 aa6.19□□□□□ -1.42
CSMD3-205ENST00000462254 MST1RQ04912 1400 aa6.19□□□□□ -1.42
CSMD3-205ENST00000462254 CPSF1Q10570 1443 aaKnown RBP6.19□□□□□ -1.42
CSMD3-205ENST00000462254 HOXD8P13378 290 aaPredicted RBP6.19□□□□□ -1.42
CSMD3-205ENST00000462254 SDE2Q6IQ49 451 aa6.19□□□□□ -1.42
CSMD3-205ENST00000462254 TMEM87AQ8NBN3 555 aa6.19□□□□□ -1.42
CSMD3-205ENST00000462254 MICAL1Q8TDZ2 1067 aa6.19□□□□□ -1.42
CSMD3-205ENST00000462254 DHX38Q92620 1227 aaKnown RBP6.19□□□□□ -1.42
CSMD3-205ENST00000462254 FAM129BQ96TA1 746 aa6.19□□□□□ -1.42
CSMD3-205ENST00000462254 CCSER2Q9H7U1 834 aa6.19□□□□□ -1.42
CSMD3-205ENST00000462254 PANK3Q9H999 370 aa6.19□□□□□ -1.42
CSMD3-205ENST00000462254 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.19□□□□□ -1.42
CSMD3-205ENST00000462254 NSD3Q9BZ95 1437 aa6.18□□□□□ -1.42
CSMD3-205ENST00000462254 ROBO1Q9Y6N7 1651 aa6.18□□□□□ -1.42
CSMD3-205ENST00000462254 C1orf167Q5SNV9 1468 aa6.18□□□□□ -1.42
CSMD3-205ENST00000462254 EREGO14944 169 aa6.18□□□□□ -1.42
CSMD3-205ENST00000462254 GPR182O15218 404 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms