RNA–Protein interactions for RNA: ENST00000462212.5

ITSN1-222, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-222	ENST00000462212	ATP5J	P18859	108 aa		10.18	□□□□□ -0.78
ITSN1-222	ENST00000462212	GJA5	P36382	358 aa		10.18	□□□□□ -0.78
ITSN1-222	ENST00000462212	AAMP	Q13685	434 aa		10.18	□□□□□ -0.78
ITSN1-222	ENST00000462212	VGLL4	Q14135	290 aa		10.18	□□□□□ -0.78
ITSN1-222	ENST00000462212	ZNF341	Q9BYN7	854 aa		10.18	□□□□□ -0.78
ITSN1-222	ENST00000462212	RNF186	Q9NXI6	227 aa		10.18	□□□□□ -0.78
ITSN1-222	ENST00000462212	NDUFB9	Q9Y6M9	179 aa		10.18	□□□□□ -0.78
ITSN1-222	ENST00000462212	CDK5RAP2	Q96SN8	1893 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	TESPA1	A2RU30	521 aa	Predicted RBP	10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	DDTL	A6NHG4	134 aa	Predicted RBP	10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	MANSC4	A6NHS7	340 aa	Predicted RBP	10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	SPDYE5	A6NIY4	337 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	SMARCA5	O60264	1052 aa	Predicted RBP	10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	IDH1	O75874	414 aa	Known RBP	10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	BAG3	O95817	575 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	PLCG2	P16885	1265 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	INHBE	P58166	350 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	SREBF2	Q12772	1141 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	MKRN3	Q13064	507 aa	Known RBP	10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	TTF1	Q15361	905 aa	Predicted RBP	10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	MIGA2	Q7L4E1	593 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	OPTN	Q96CV9	577 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	WRNIP1	Q96S55	665 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	CFHR5	Q9BXR6	569 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	ELP3	Q9H9T3	547 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	TSKS	Q9UJT2	592 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	CSAD	Q9Y600	493 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	SNCAIP	Q9Y6H5	919 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	FOCAD	Q5VW36	1801 aa		10.17	□□□□□ -0.78
ITSN1-222	ENST00000462212	PHF20L1	A8MW92	1017 aa		10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	TRPA1	O75762	1119 aa		10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	CYP7A1	P22680	504 aa		10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	CACNB1	Q02641	598 aa	Predicted RBP	10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	MAP3K12	Q12852	859 aa		10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	PICALM	Q13492	652 aa		10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	HDAC1	Q13547	482 aa	Predicted RBP	10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	NOL9	Q5SY16	702 aa	Known RBP	10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	CERS3	Q8IU89	383 aa		10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	TEX11	Q8IYF3	940 aa		10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	MAGEB6	Q8N7X4	407 aa		10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	MS4A4A	Q96JQ5	239 aa		10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	HAUS7	Q99871	368 aa		10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	NOL10	Q9BSC4	688 aa	Known RBP	10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.16	□□□□□ -0.78
ITSN1-222	ENST00000462212	CASP8AP2	Q9UKL3	1982 aa		10.15	□□□□□ -0.78
ITSN1-222	ENST00000462212	GOLIM4	O00461	696 aa		10.15	□□□□□ -0.78
ITSN1-222	ENST00000462212	TBC1D12	O60347	775 aa		10.15	□□□□□ -0.78
ITSN1-222	ENST00000462212	INPP5B	P32019	993 aa		10.15	□□□□□ -0.78
ITSN1-222	ENST00000462212	NOM1	Q5C9Z4	860 aa	Known RBP	10.15	□□□□□ -0.78
ITSN1-222	ENST00000462212	ERO1B	Q86YB8	467 aa		10.15	□□□□□ -0.78
ITSN1-222	ENST00000462212	IFNL1	Q8IU54	200 aa		10.15	□□□□□ -0.78
ITSN1-222	ENST00000462212	DNAJC2	Q99543	621 aa	Known RBP	10.15	□□□□□ -0.78
ITSN1-222	ENST00000462212	BOLA2	Q9H3K6	86 aa		10.15	□□□□□ -0.78
ITSN1-222	ENST00000462212	SIPA1L1	O43166	1804 aa		10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	FLT1	P17948	1338 aa		10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	TCRBV5S4A2T	A0A5A2	114 aa		10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	ALDH1A1	P00352	501 aa		10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	PDE6A	P16499	860 aa		10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	DYNLL1	P63167	89 aa	Known RBP	10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	PPAT	Q06203	517 aa		10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	PPIL2	Q13356	520 aa		10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	METTL16	Q86W50	562 aa	Known RBP	10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	EDC3	Q96F86	508 aa	Known RBP	10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	PTPN18	Q99952	460 aa		10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	RIOK1	Q9BRS2	568 aa	Known RBP	10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	DHX36	Q9H2U1	1008 aa	Known RBP	10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	ECHDC1	Q9NTX5	307 aa		10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	PAG1	Q9NWQ8	432 aa		10.14	□□□□□ -0.79
ITSN1-222	ENST00000462212	IRF6	O14896	467 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	SLURP2	P0DP57	97 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	GTF2A2	P52657	109 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	SLC9C2	Q5TAH2	1124 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	MAPKAPK5	Q8IW41	473 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	SCYL3	Q8IZE3	742 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	TNS4	Q8IZW8	715 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	MIGA1	Q8NAN2	632 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	TGFBRAP1	Q8WUH2	860 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	BRI3BP	Q8WY22	251 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	OTUD5	Q96G74	571 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	BCL11A	Q9H165	835 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	PI4KB	Q9UBF8	816 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	HERC5	Q9UII4	1024 aa	Known RBP	10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	KCNH4	Q9UQ05	1017 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	MYH7	P12883	1935 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	DOCK1	Q14185	1865 aa		10.13	□□□□□ -0.79
ITSN1-222	ENST00000462212	TTC41P	Q6P2S7	1318 aa		10.12	□□□□□ -0.79
ITSN1-222	ENST00000462212	SALL3	Q9BXA9	1300 aa		10.12	□□□□□ -0.79
ITSN1-222	ENST00000462212	ZNF532	Q9HCE3	1301 aa		10.12	□□□□□ -0.79
ITSN1-222	ENST00000462212	CTNND1	O60716	968 aa	Known RBP	10.12	□□□□□ -0.79
ITSN1-222	ENST00000462212	SLC34A2	O95436	690 aa		10.12	□□□□□ -0.79
ITSN1-222	ENST00000462212	TBC1D8	O95759	1140 aa		10.12	□□□□□ -0.79
ITSN1-222	ENST00000462212	ADD2	P35612	726 aa		10.12	□□□□□ -0.79
ITSN1-222	ENST00000462212	EXOC6	Q8TAG9	804 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms