RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 BAG3O95817 575 aa20.03■□□□□ 0.8
SMARCD3-204ENST00000460431 RGS19P49795 217 aa20.03■□□□□ 0.8
SMARCD3-204ENST00000460431 MAP3K12Q12852 859 aa20.03■□□□□ 0.8
SMARCD3-204ENST00000460431 HDAC1Q13547 482 aaPredicted RBP20.03■□□□□ 0.8
SMARCD3-204ENST00000460431 SPRYD7Q5W111 196 aa20.03■□□□□ 0.8
SMARCD3-204ENST00000460431 TMED8Q6PL24 325 aaPredicted RBP20.03■□□□□ 0.8
SMARCD3-204ENST00000460431 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.03■□□□□ 0.8
SMARCD3-204ENST00000460431 ADGRA1Q86SQ6 560 aa20.03■□□□□ 0.8
SMARCD3-204ENST00000460431 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.03■□□□□ 0.8
SMARCD3-204ENST00000460431 NOL10Q9BSC4 688 aaKnown RBP20.03■□□□□ 0.8
SMARCD3-204ENST00000460431 TBC1D8O95759 1140 aa20.02■□□□□ 0.8
SMARCD3-204ENST00000460431 MIGA2Q7L4E1 593 aa20.02■□□□□ 0.8
SMARCD3-204ENST00000460431 SH3BP5LQ7L8J4 393 aa20.02■□□□□ 0.8
SMARCD3-204ENST00000460431 BOLA2Q9H3K6 86 aa20.02■□□□□ 0.8
SMARCD3-204ENST00000460431 AATFQ9NY61 560 aaKnown RBP eCLIP20.02■□□□□ 0.8
SMARCD3-204ENST00000460431 LAMB1P07942 1786 aa20.01■□□□□ 0.79
SMARCD3-204ENST00000460431 ZBTB48P10074 688 aaPredicted RBP20.01■□□□□ 0.79
SMARCD3-204ENST00000460431 PLCG2P16885 1265 aa20.01■□□□□ 0.79
SMARCD3-204ENST00000460431 CYP7A1P22680 504 aa20.01■□□□□ 0.79
SMARCD3-204ENST00000460431 PICALMQ13492 652 aa20.01■□□□□ 0.79
SMARCD3-204ENST00000460431 MAGEB6Q8N7X4 407 aa20.01■□□□□ 0.79
SMARCD3-204ENST00000460431 EXOC6Q8TAG9 804 aa20.01■□□□□ 0.79
SMARCD3-204ENST00000460431 SH3RF3Q8TEJ3 882 aaPredicted RBP20.01■□□□□ 0.79
SMARCD3-204ENST00000460431 WNK4Q96J92 1243 aa20.01■□□□□ 0.79
SMARCD3-204ENST00000460431 DNAJC2Q99543 621 aaKnown RBP20.01■□□□□ 0.79
SMARCD3-204ENST00000460431 HAUS7Q99871 368 aa20.01■□□□□ 0.79
SMARCD3-204ENST00000460431 ZNF341Q9BYN7 854 aa20.01■□□□□ 0.79
SMARCD3-204ENST00000460431 FOCADQ5VW36 1801 aa20.01■□□□□ 0.79
SMARCD3-204ENST00000460431 DDTLA6NHG4 134 aaPredicted RBP20■□□□□ 0.79
SMARCD3-204ENST00000460431 GOLIM4O00461 696 aa20■□□□□ 0.79
SMARCD3-204ENST00000460431 MAP3K10Q02779 954 aa20■□□□□ 0.79
SMARCD3-204ENST00000460431 SREBF2Q12772 1141 aa20■□□□□ 0.79
SMARCD3-204ENST00000460431 VGLL4Q14135 290 aa20■□□□□ 0.79
SMARCD3-204ENST00000460431 TEX11Q8IYF3 940 aa20■□□□□ 0.79
SMARCD3-204ENST00000460431 WRNIP1Q96S55 665 aa20■□□□□ 0.79
SMARCD3-204ENST00000460431 ECHDC1Q9NTX5 307 aa20■□□□□ 0.79
SMARCD3-204ENST00000460431 ZBTB4Q9P1Z0 1013 aaPredicted RBP20■□□□□ 0.79
SMARCD3-204ENST00000460431 ZNF112Q9UJU3 913 aa20■□□□□ 0.79
SMARCD3-204ENST00000460431 CSADQ9Y600 493 aa20■□□□□ 0.79
SMARCD3-204ENST00000460431 ATRNL1Q5VV63 1379 aa19.99■□□□□ 0.79
SMARCD3-204ENST00000460431 NOM1Q5C9Z4 860 aaKnown RBP19.99■□□□□ 0.79
SMARCD3-204ENST00000460431 CTU1Q7Z7A3 348 aaKnown RBP19.99■□□□□ 0.79
SMARCD3-204ENST00000460431 ZSCAN29Q8IWY8 852 aaPredicted RBP19.99■□□□□ 0.79
SMARCD3-204ENST00000460431 ZNF296Q8WUU4 475 aaPredicted RBP19.99■□□□□ 0.79
SMARCD3-204ENST00000460431 EDC3Q96F86 508 aaKnown RBP19.99■□□□□ 0.79
SMARCD3-204ENST00000460431 CFHR5Q9BXR6 569 aa19.99■□□□□ 0.79
SMARCD3-204ENST00000460431 ELP3Q9H9T3 547 aa19.99■□□□□ 0.79
SMARCD3-204ENST00000460431 PAG1Q9NWQ8 432 aa19.99■□□□□ 0.79
SMARCD3-204ENST00000460431 MYH7P12883 1935 aa19.98■□□□□ 0.79
SMARCD3-204ENST00000460431 GJA5P36382 358 aa19.98■□□□□ 0.79
SMARCD3-204ENST00000460431 ZKSCAN4Q969J2 545 aaPredicted RBP19.98■□□□□ 0.79
SMARCD3-204ENST00000460431 GCC1Q96CN9 775 aa19.98■□□□□ 0.79
SMARCD3-204ENST00000460431 OSBPL5Q9H0X9 879 aaPredicted RBP19.98■□□□□ 0.79
SMARCD3-204ENST00000460431 R3HDMLQ9H3Y0 253 aa19.98■□□□□ 0.79
SMARCD3-204ENST00000460431 COL2A1P02458 1487 aaPredicted RBP19.98■□□□□ 0.79
SMARCD3-204ENST00000460431 MANSC4A6NHS7 340 aaPredicted RBP19.97■□□□□ 0.79
SMARCD3-204ENST00000460431 GPR25O00155 361 aa19.97■□□□□ 0.79
SMARCD3-204ENST00000460431 PDE6AP16499 860 aa19.97■□□□□ 0.79
SMARCD3-204ENST00000460431 INHBEP58166 350 aa19.97■□□□□ 0.79
SMARCD3-204ENST00000460431 DYNLL1P63167 89 aaKnown RBP19.97■□□□□ 0.79
SMARCD3-204ENST00000460431 SLC9C2Q5TAH2 1124 aa19.97■□□□□ 0.79
SMARCD3-204ENST00000460431 CERS3Q8IU89 383 aa19.97■□□□□ 0.79
SMARCD3-204ENST00000460431 OPTNQ96CV9 577 aa19.97■□□□□ 0.79
SMARCD3-204ENST00000460431 SNCAIPQ9Y6H5 919 aa19.97■□□□□ 0.79
SMARCD3-204ENST00000460431 INPP5BP32019 993 aa19.96■□□□□ 0.79
SMARCD3-204ENST00000460431 MIGA1Q8NAN2 632 aa19.96■□□□□ 0.79
SMARCD3-204ENST00000460431 TGFBRAP1Q8WUH2 860 aa19.96■□□□□ 0.79
SMARCD3-204ENST00000460431 GPATCH3Q96I76 525 aa19.96■□□□□ 0.79
SMARCD3-204ENST00000460431 MYH1P12882 1939 aa19.96■□□□□ 0.79
SMARCD3-204ENST00000460431 TCRBV5S4A2TA0A5A2 114 aa19.95■□□□□ 0.78
SMARCD3-204ENST00000460431 SPDYE5A6NIY4 337 aa19.95■□□□□ 0.78
SMARCD3-204ENST00000460431 PHF20L1A8MW92 1017 aa19.95■□□□□ 0.78
SMARCD3-204ENST00000460431 TBC1D12O60347 775 aa19.95■□□□□ 0.78
SMARCD3-204ENST00000460431 MLLT1Q03111 559 aaPredicted RBP19.95■□□□□ 0.78
SMARCD3-204ENST00000460431 ANKRD45Q5TZF3 282 aa19.95■□□□□ 0.78
SMARCD3-204ENST00000460431 ERO1BQ86YB8 467 aa19.95■□□□□ 0.78
SMARCD3-204ENST00000460431 CNKSR2Q8WXI2 1034 aa19.95■□□□□ 0.78
SMARCD3-204ENST00000460431 RWDD1Q9H446 243 aaPredicted RBP19.95■□□□□ 0.78
SMARCD3-204ENST00000460431 ALDH1A1P00352 501 aa19.94■□□□□ 0.78
SMARCD3-204ENST00000460431 NOL9Q5SY16 702 aaKnown RBP19.94■□□□□ 0.78
SMARCD3-204ENST00000460431 IFNL1Q8IU54 200 aa19.94■□□□□ 0.78
SMARCD3-204ENST00000460431 MAPKAPK5Q8IW41 473 aa19.94■□□□□ 0.78
SMARCD3-204ENST00000460431 RIOK1Q9BRS2 568 aaKnown RBP19.94■□□□□ 0.78
SMARCD3-204ENST00000460431 DHX36Q9H2U1 1008 aaKnown RBP19.94■□□□□ 0.78
SMARCD3-204ENST00000460431 FLT1P17948 1338 aa19.94■□□□□ 0.78
SMARCD3-204ENST00000460431 TTC41PQ6P2S7 1318 aa19.94■□□□□ 0.78
SMARCD3-204ENST00000460431 ZNF532Q9HCE3 1301 aa19.94■□□□□ 0.78
SMARCD3-204ENST00000460431 TESPA1A2RU30 521 aaPredicted RBP19.93■□□□□ 0.78
SMARCD3-204ENST00000460431 IGF2BP3O00425 579 aaKnown RBP eCLIP19.93■□□□□ 0.78
SMARCD3-204ENST00000460431 SLURP2P0DP57 97 aa19.93■□□□□ 0.78
SMARCD3-204ENST00000460431 ADD2P35612 726 aa19.93■□□□□ 0.78
SMARCD3-204ENST00000460431 TSHZ3Q63HK5 1081 aa19.93■□□□□ 0.78
SMARCD3-204ENST00000460431 OTUD7AQ8TE49 926 aaPredicted RBP19.93■□□□□ 0.78
SMARCD3-204ENST00000460431 OTUD5Q96G74 571 aa19.93■□□□□ 0.78
SMARCD3-204ENST00000460431 MS4A4AQ96JQ5 239 aa19.93■□□□□ 0.78
SMARCD3-204ENST00000460431 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.93■□□□□ 0.78
SMARCD3-204ENST00000460431 ZBTB47Q9UFB7 747 aaPredicted RBP19.93■□□□□ 0.78
SMARCD3-204ENST00000460431 MAGEB6P1A0A0J9YX57 407 aa19.92■□□□□ 0.78
SMARCD3-204ENST00000460431 IGHDP01880 384 aa19.92■□□□□ 0.78
SMARCD3-204ENST00000460431 SMC5Q8IY18 1101 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms