RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 TRMT2AQ8IZ69 625 aaKnown RBP12.98□□□□□ -0.33
HDLBP-227ENST00000458564 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
HDLBP-227ENST00000458564 COPRSQ9NQ92 184 aa12.98□□□□□ -0.33
HDLBP-227ENST00000458564 HDAC5Q9UQL6 1122 aa12.98□□□□□ -0.33
HDLBP-227ENST00000458564 PTPRAP18433 802 aa12.97□□□□□ -0.33
HDLBP-227ENST00000458564 RGS3P49796 1198 aa12.97□□□□□ -0.33
HDLBP-227ENST00000458564 FCGRTP55899 365 aa12.97□□□□□ -0.33
HDLBP-227ENST00000458564 PRKCZQ05513 592 aa12.97□□□□□ -0.33
HDLBP-227ENST00000458564 RASGRF1Q13972 1273 aa12.97□□□□□ -0.33
HDLBP-227ENST00000458564 CCDC102BQ68D86 513 aa12.97□□□□□ -0.33
HDLBP-227ENST00000458564 FASTKD5Q7L8L6 764 aaKnown RBP12.97□□□□□ -0.33
HDLBP-227ENST00000458564 SLAIN1Q8ND83 568 aa12.97□□□□□ -0.33
HDLBP-227ENST00000458564 PICK1Q9NRD5 415 aa12.97□□□□□ -0.33
HDLBP-227ENST00000458564 CYP2C8P10632 490 aa12.96□□□□□ -0.33
HDLBP-227ENST00000458564 CCL5P13501 91 aa12.96□□□□□ -0.33
HDLBP-227ENST00000458564 ADORA1P30542 326 aa12.96□□□□□ -0.33
HDLBP-227ENST00000458564 UBXN2AP68543 259 aa12.96□□□□□ -0.33
HDLBP-227ENST00000458564 SH3BP5LQ7L8J4 393 aa12.96□□□□□ -0.33
HDLBP-227ENST00000458564 SLF2Q8IX21 1173 aa12.96□□□□□ -0.33
HDLBP-227ENST00000458564 AFG3L2Q9Y4W6 797 aa12.96□□□□□ -0.33
HDLBP-227ENST00000458564 LRRFIP2Q9Y608 721 aaKnown RBP12.96□□□□□ -0.33
HDLBP-227ENST00000458564 ZHX2Q9Y6X8 837 aa12.96□□□□□ -0.33
HDLBP-227ENST00000458564 AK9Q5TCS8 1911 aa12.96□□□□□ -0.34
HDLBP-227ENST00000458564 CTNND1O60716 968 aaKnown RBP12.95□□□□□ -0.34
HDLBP-227ENST00000458564 NPM3O75607 178 aaKnown RBP12.95□□□□□ -0.34
HDLBP-227ENST00000458564 CAPN2P17655 700 aa12.95□□□□□ -0.34
HDLBP-227ENST00000458564 DZIP1Q86YF9 867 aaKnown RBP12.95□□□□□ -0.34
HDLBP-227ENST00000458564 API5Q9BZZ5 524 aaKnown RBP12.95□□□□□ -0.34
HDLBP-227ENST00000458564 PA2G4Q9UQ80 394 aaKnown RBP12.95□□□□□ -0.34
HDLBP-227ENST00000458564 PTPRFP10586 1907 aa12.95□□□□□ -0.34
HDLBP-227ENST00000458564 MYH2Q9UKX2 1941 aa12.95□□□□□ -0.34
HDLBP-227ENST00000458564 MROH7-TTC4A0A0A0MT08 1334 aa12.94□□□□□ -0.34
HDLBP-227ENST00000458564 DOCK1Q14185 1865 aa12.94□□□□□ -0.34
HDLBP-227ENST00000458564 COL2A1P02458 1487 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-227ENST00000458564 DDTLA6NHG4 134 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-227ENST00000458564 TBC1D12O60347 775 aa12.94□□□□□ -0.34
HDLBP-227ENST00000458564 ECM2O94769 699 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-227ENST00000458564 MTX1Q13505 466 aa12.94□□□□□ -0.34
HDLBP-227ENST00000458564 IRF5Q13568 498 aa12.94□□□□□ -0.34
HDLBP-227ENST00000458564 SPTY2D1Q68D10 685 aaPredicted RBP12.94□□□□□ -0.34
HDLBP-227ENST00000458564 PXYLP1Q8TE99 480 aa12.94□□□□□ -0.34
HDLBP-227ENST00000458564 CDCA7LQ96GN5 454 aa12.94□□□□□ -0.34
HDLBP-227ENST00000458564 MEIS3Q99687 375 aa12.94□□□□□ -0.34
HDLBP-227ENST00000458564 HTATIP2Q9BUP3 242 aa12.94□□□□□ -0.34
HDLBP-227ENST00000458564 RNF208Q9H0X6 261 aa12.94□□□□□ -0.34
HDLBP-227ENST00000458564 DDX4Q9NQI0 724 aaKnown RBP12.94□□□□□ -0.34
HDLBP-227ENST00000458564 NOB1Q9ULX3 412 aaKnown RBP12.94□□□□□ -0.34
HDLBP-227ENST00000458564 MGAMO43451 1857 aa12.93□□□□□ -0.34
HDLBP-227ENST00000458564 PHIPQ8WWQ0 1821 aa12.93□□□□□ -0.34
HDLBP-227ENST00000458564 GPR75-ASB3A0A0A6YYF3 556 aa12.93□□□□□ -0.34
HDLBP-227ENST00000458564 A0A1B0GUL7 405 aa12.93□□□□□ -0.34
HDLBP-227ENST00000458564 MAP4K4O95819 1239 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-227ENST00000458564 BTDP43251 543 aa12.93□□□□□ -0.34
HDLBP-227ENST00000458564 RHBDL3P58872 404 aa12.93□□□□□ -0.34
HDLBP-227ENST00000458564 MVPQ14764 893 aaKnown RBP12.93□□□□□ -0.34
HDLBP-227ENST00000458564 CHRDL2Q6WN34 429 aa12.93□□□□□ -0.34
HDLBP-227ENST00000458564 ZSCAN29Q8IWY8 852 aaPredicted RBP12.93□□□□□ -0.34
HDLBP-227ENST00000458564 U2AF1L4Q8WU68 220 aaKnown RBP12.93□□□□□ -0.34
HDLBP-227ENST00000458564 PRO3102Q9H379 93 aa12.93□□□□□ -0.34
HDLBP-227ENST00000458564 ABCF2Q9UG63 623 aa12.93□□□□□ -0.34
HDLBP-227ENST00000458564 GABRQQ9UN88 632 aa12.93□□□□□ -0.34
HDLBP-227ENST00000458564 AGTPBP1Q9UPW5 1226 aa12.93□□□□□ -0.34
HDLBP-227ENST00000458564 AKAP2Q9Y2D5 859 aa12.93□□□□□ -0.34
HDLBP-227ENST00000458564 ADCY3O60266 1144 aa12.92□□□□□ -0.34
HDLBP-227ENST00000458564 FARP2O94887 1054 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-227ENST00000458564 FLT3LGP49771 235 aa12.92□□□□□ -0.34
HDLBP-227ENST00000458564 TIMM10P62072 90 aa12.92□□□□□ -0.34
HDLBP-227ENST00000458564 MECOMQ03112 1051 aa12.92□□□□□ -0.34
HDLBP-227ENST00000458564 GADL1Q6ZQY3 521 aa12.92□□□□□ -0.34
HDLBP-227ENST00000458564 SMCR8Q8TEV9 937 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-227ENST00000458564 ZNF384Q8TF68 577 aa12.92□□□□□ -0.34
HDLBP-227ENST00000458564 ARHGAP45Q92619 1136 aa12.92□□□□□ -0.34
HDLBP-227ENST00000458564 DPF3Q92784 378 aa12.92□□□□□ -0.34
HDLBP-227ENST00000458564 XAGE2Q96GT9 111 aa12.92□□□□□ -0.34
HDLBP-227ENST00000458564 UNC93B1Q9H1C4 597 aa12.92□□□□□ -0.34
HDLBP-227ENST00000458564 BIN2Q9UBW5 565 aaPredicted RBP12.92□□□□□ -0.34
HDLBP-227ENST00000458564 TRIM75PA6NK02 468 aa12.91□□□□□ -0.34
HDLBP-227ENST00000458564 TNPO2O14787 897 aaKnown RBP12.91□□□□□ -0.34
HDLBP-227ENST00000458564 SGPL1O95470 568 aa12.91□□□□□ -0.34
HDLBP-227ENST00000458564 INHAP05111 366 aa12.91□□□□□ -0.34
HDLBP-227ENST00000458564 GNAI3P08754 354 aa12.91□□□□□ -0.34
HDLBP-227ENST00000458564 PICALMQ13492 652 aa12.91□□□□□ -0.34
HDLBP-227ENST00000458564 FAM110CQ1W6H9 321 aa12.91□□□□□ -0.34
HDLBP-227ENST00000458564 ERICH6Q7L0X2 663 aa12.91□□□□□ -0.34
HDLBP-227ENST00000458564 PROCA1Q8NCQ7 364 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-227ENST00000458564 TBC1D2Q9BYX2 928 aa12.91□□□□□ -0.34
HDLBP-227ENST00000458564 PAK6Q9NQU5 681 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-227ENST00000458564 RBM27Q9P2N5 1060 aaKnown RBP12.91□□□□□ -0.34
HDLBP-227ENST00000458564 PNMA3Q9UL41 463 aa12.91□□□□□ -0.34
HDLBP-227ENST00000458564 NR2E3Q9Y5X4 410 aa12.91□□□□□ -0.34
HDLBP-227ENST00000458564 LOC285556D6RIA3 1793 aa12.9□□□□□ -0.34
HDLBP-227ENST00000458564 SRGAP3O43295 1099 aa12.9□□□□□ -0.34
HDLBP-227ENST00000458564 SLURP2P0DP57 97 aa12.9□□□□□ -0.34
HDLBP-227ENST00000458564 TFCP2Q12800 502 aa12.9□□□□□ -0.34
HDLBP-227ENST00000458564 OSBPL5Q9H0X9 879 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-227ENST00000458564 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-227ENST00000458564 A0A1W2PPC1 479 aa12.89□□□□□ -0.35
HDLBP-227ENST00000458564 ZBTB7BO15156 539 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-227ENST00000458564 ELNP15502 786 aa12.89□□□□□ -0.35
HDLBP-227ENST00000458564 ARID4AP29374 1257 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms