RNA–Protein interactions for RNA: ENST00000456932.6

CSPG4P10-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

BASIC

Gene CSPG4P10, Length 4,817 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-201ENST00000456932 MCM6Q14566 821 aa12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 ENOX2Q16206 610 aaKnown RBP12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 MICALCLQ6ZW33 695 aa12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 ARFGAP3Q9NP61 516 aa12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 BMP15O95972 392 aa12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 CALM1P0DP23 149 aa12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 CALM2P0DP24 149 aa12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 CALM3P0DP25 149 aa12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 ZBTB9Q96C00 473 aa12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 SRRTQ9BXP5 876 aaKnown RBP12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 CBX8Q9HC52 389 aa12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 KNDC1Q76NI1 1749 aa12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 NBPF26B4DH59 902 aa12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 PDIA3P30101 505 aaKnown RBP12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 SEPT7Q16181 437 aaKnown RBP12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 NBPF10Q6P3W6 841 aaKnown RBP12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 NBPF15Q8N660 670 aa12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 C3P01024 1663 aa12.85□□□□□ -0.35
CSPG4P10-201ENST00000456932 PHKA1P46020 1223 aa12.84□□□□□ -0.35
CSPG4P10-201ENST00000456932 CCDC150Q8NCX0 1101 aa12.84□□□□□ -0.35
CSPG4P10-201ENST00000456932 MYL10Q9BUA6 226 aa12.84□□□□□ -0.35
CSPG4P10-201ENST00000456932 TRIM75PA6NK02 468 aa12.84□□□□□ -0.35
CSPG4P10-201ENST00000456932 KIF5CO60282 957 aa12.84□□□□□ -0.35
CSPG4P10-201ENST00000456932 STX8Q9UNK0 236 aa12.84□□□□□ -0.35
CSPG4P10-201ENST00000456932 MPHOSPH10O00566 681 aaKnown RBP12.83□□□□□ -0.35
CSPG4P10-201ENST00000456932 DDIT3P35638 169 aa12.83□□□□□ -0.35
CSPG4P10-201ENST00000456932 PDIA6Q15084 440 aa12.83□□□□□ -0.35
CSPG4P10-201ENST00000456932 RABL6Q3YEC7 729 aaPredicted RBP12.83□□□□□ -0.35
CSPG4P10-201ENST00000456932 KRI1Q8N9T8 703 aaKnown RBP12.83□□□□□ -0.35
CSPG4P10-201ENST00000456932 PHKBQ93100 1093 aa12.83□□□□□ -0.35
CSPG4P10-201ENST00000456932 OSBP2Q969R2 916 aa12.83□□□□□ -0.35
CSPG4P10-201ENST00000456932 UBE3CQ15386 1083 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 FAM98CQ17RN3 349 aaKnown RBP12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 OGFOD1Q8N543 542 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 CCDC148Q8NFR7 591 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 USP28Q96RU2 1077 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 ELP1O95163 1332 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 SKILP12757 684 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 MCM3P25205 808 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 KRT40Q6A162 431 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 PI16Q6UXB8 463 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 JDP2Q8WYK2 163 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 IL25Q9H293 177 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 MCM9Q9NXL9 1143 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 LOC102724428A0A0B4J2F2 783 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 SLU7O95391 586 aaKnown RBP12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 SIK1P57059 783 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 CCDC91Q7Z6B0 441 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 NSUN7Q8NE18 718 aaKnown RBP12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 OVOS2A0A0G2JMS6 1433 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 SALL3Q9BXA9 1300 aa12.83□□□□□ -0.36
CSPG4P10-201ENST00000456932 RFX7Q2KHR2 1363 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 NR1I2O75469 434 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 KRT18P05783 430 aaKnown RBP12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 TSPY3P0CV98 308 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 TSPY8P0CW00 308 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 CRKLP46109 303 aaKnown RBP12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 UBASH3AP57075 661 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 AKNAD1Q5T1N1 836 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 TSC1Q92574 1164 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 HDAC9Q9UKV0 1011 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 JAG2Q9Y219 1238 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 DEXIO95424 95 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 LMOD1P29536 600 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 TERF1P54274 439 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 TRAPPC3LQ5T215 181 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 ZNF804AQ7Z570 1209 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 TMEM87AQ8NBN3 555 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 UTYO14607 1347 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 SYCP1Q15431 976 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 CCDC178Q5BJE1 867 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 DRC1Q96MC2 740 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 PYM1Q9BRP8 204 aaKnown RBP12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 YEATS4O95619 227 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 HIBADHP31937 336 aaKnown RBP12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 KRT2P35908 639 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 FOXO4P98177 505 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 TOB2Q14106 344 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 MYSM1Q5VVJ2 828 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 IFNL3Q8IZI9 196 aa12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 CCDC12Q8WUD4 166 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 CCNL1Q9UK58 526 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P10-201ENST00000456932 CLEC11AQ9Y240 323 aa12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 PXDNQ92626 1479 aa12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 GOLGA6L10A0A0M3HER8 536 aa12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 ERVV-1B6SEH8 477 aa12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 AFMP43652 599 aa12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 GNG11P61952 73 aa12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 GABPB1Q06547 395 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 RILPL1Q5EBL4 403 aa12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 CEP57Q86XR8 500 aa12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 TTLL11Q8NHH1 800 aa12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 GNAQP50148 359 aa12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 BCAMP50895 628 aa12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 KRBA2Q6ZNG9 492 aa12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 KIAA1328Q86T90 577 aa12.81□□□□□ -0.36
CSPG4P10-201ENST00000456932 DIS3L2Q8IYB7 885 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms