RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 MVPQ14764 893 aaKnown RBP23.19■■□□□ 1.3
COL20A1-204ENST00000455906 GPAT2Q6NUI2 795 aa23.19■■□□□ 1.3
COL20A1-204ENST00000455906 SH3TC2Q8TF17 1288 aa23.19■■□□□ 1.3
COL20A1-204ENST00000455906 PTPRFP10586 1907 aa23.19■■□□□ 1.3
COL20A1-204ENST00000455906 PHIPQ8WWQ0 1821 aa23.19■■□□□ 1.3
COL20A1-204ENST00000455906 DDTLA6NHG4 134 aaPredicted RBP23.18■■□□□ 1.3
COL20A1-204ENST00000455906 BTDP43251 543 aa23.18■■□□□ 1.3
COL20A1-204ENST00000455906 SPTY2D1Q68D10 685 aaPredicted RBP23.18■■□□□ 1.3
COL20A1-204ENST00000455906 SLF2Q8IX21 1173 aa23.18■■□□□ 1.3
COL20A1-204ENST00000455906 SCYL3Q8IZE3 742 aa23.18■■□□□ 1.3
COL20A1-204ENST00000455906 TRIM47Q96LD4 638 aa23.18■■□□□ 1.3
COL20A1-204ENST00000455906 DOCK1Q14185 1865 aa23.17■■□□□ 1.3
COL20A1-204ENST00000455906 BCAR3O75815 825 aa23.17■■□□□ 1.3
COL20A1-204ENST00000455906 ECM2O94769 699 aaPredicted RBP23.17■■□□□ 1.3
COL20A1-204ENST00000455906 PRMT2P55345 433 aa23.17■■□□□ 1.3
COL20A1-204ENST00000455906 MECOMQ03112 1051 aa23.17■■□□□ 1.3
COL20A1-204ENST00000455906 ATF7IPQ6VMQ6 1270 aa23.17■■□□□ 1.3
COL20A1-204ENST00000455906 HMG20BQ9P0W2 317 aa23.17■■□□□ 1.3
COL20A1-204ENST00000455906 GPR75-ASB3A0A0A6YYF3 556 aa23.16■■□□□ 1.3
COL20A1-204ENST00000455906 PNMA6EA0A0J9YXQ4 647 aa23.16■■□□□ 1.3
COL20A1-204ENST00000455906 IPO8O15397 1037 aaKnown RBP23.16■■□□□ 1.3
COL20A1-204ENST00000455906 MYCP01106 439 aaPredicted RBP23.16■■□□□ 1.3
COL20A1-204ENST00000455906 GNAI2P04899 355 aa23.16■■□□□ 1.3
COL20A1-204ENST00000455906 PTPRAP18433 802 aa23.16■■□□□ 1.3
COL20A1-204ENST00000455906 PSMC4P43686 418 aa23.16■■□□□ 1.3
COL20A1-204ENST00000455906 RHBDL3P58872 404 aa23.16■■□□□ 1.3
COL20A1-204ENST00000455906 PI16Q6UXB8 463 aa23.16■■□□□ 1.3
COL20A1-204ENST00000455906 ERICH6Q7L0X2 663 aa23.16■■□□□ 1.3
COL20A1-204ENST00000455906 ZSCAN29Q8IWY8 852 aaPredicted RBP23.16■■□□□ 1.3
COL20A1-204ENST00000455906 NEUROD6Q96NK8 337 aa23.16■■□□□ 1.3
COL20A1-204ENST00000455906 SRRDQ9UH36 339 aa23.16■■□□□ 1.3
COL20A1-204ENST00000455906 ZHX2Q9Y6X8 837 aa23.16■■□□□ 1.3
COL20A1-204ENST00000455906 MGAMO43451 1857 aa23.15■■□□□ 1.3
COL20A1-204ENST00000455906 A0A0G2JLL6 359 aaPredicted RBP23.15■■□□□ 1.3
COL20A1-204ENST00000455906 BCRP11274 1271 aa23.15■■□□□ 1.3
COL20A1-204ENST00000455906 PICALMQ13492 652 aa23.15■■□□□ 1.3
COL20A1-204ENST00000455906 SLC4A8Q2Y0W8 1093 aa23.15■■□□□ 1.3
COL20A1-204ENST00000455906 PRRT2Q7Z6L0 340 aaPredicted RBP23.15■■□□□ 1.3
COL20A1-204ENST00000455906 PICK1Q9NRD5 415 aa23.15■■□□□ 1.3
COL20A1-204ENST00000455906 AFG3L2Q9Y4W6 797 aa23.15■■□□□ 1.3
COL20A1-204ENST00000455906 CEP290O15078 2479 aa23.15■■□□□ 1.3
COL20A1-204ENST00000455906 CYP2C8P10632 490 aa23.14■■□□□ 1.29
COL20A1-204ENST00000455906 OSBPP22059 807 aa23.14■■□□□ 1.29
COL20A1-204ENST00000455906 FRAT1Q92837 279 aaPredicted RBP23.14■■□□□ 1.29
COL20A1-204ENST00000455906 NSUN4Q96CB9 384 aaKnown RBP23.14■■□□□ 1.29
COL20A1-204ENST00000455906 GCC1Q96CN9 775 aa23.14■■□□□ 1.29
COL20A1-204ENST00000455906 PARK7Q99497 189 aaKnown RBP23.14■■□□□ 1.29
COL20A1-204ENST00000455906 PCDH10Q9P2E7 1040 aa23.14■■□□□ 1.29
COL20A1-204ENST00000455906 ARID4AP29374 1257 aaPredicted RBP23.13■■□□□ 1.29
COL20A1-204ENST00000455906 TBC1D9Q6ZT07 1266 aa23.13■■□□□ 1.29
COL20A1-204ENST00000455906 SPATA5Q8NB90 893 aa23.13■■□□□ 1.29
COL20A1-204ENST00000455906 CLUAP1Q96AJ1 413 aa23.13■■□□□ 1.29
COL20A1-204ENST00000455906 CTNND1O60716 968 aaKnown RBP23.12■■□□□ 1.29
COL20A1-204ENST00000455906 NPM3O75607 178 aaKnown RBP23.12■■□□□ 1.29
COL20A1-204ENST00000455906 FASTKD5Q7L8L6 764 aaKnown RBP23.12■■□□□ 1.29
COL20A1-204ENST00000455906 FMNL1O95466 1100 aaPredicted RBP23.11■■□□□ 1.29
COL20A1-204ENST00000455906 MCAMP43121 646 aa23.11■■□□□ 1.29
COL20A1-204ENST00000455906 G3BP1Q13283 466 aaKnown RBP eCLIP23.11■■□□□ 1.29
COL20A1-204ENST00000455906 MTFR1Q15390 333 aa23.11■■□□□ 1.29
COL20A1-204ENST00000455906 GORABQ5T7V8 394 aa23.11■■□□□ 1.29
COL20A1-204ENST00000455906 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.11■■□□□ 1.29
COL20A1-204ENST00000455906 MYPNQ86TC9 1320 aa23.1■■□□□ 1.29
COL20A1-204ENST00000455906 TBC1D12O60347 775 aa23.1■■□□□ 1.29
COL20A1-204ENST00000455906 HOXD10P28358 340 aa23.1■■□□□ 1.29
COL20A1-204ENST00000455906 GADL1Q6ZQY3 521 aa23.1■■□□□ 1.29
COL20A1-204ENST00000455906 CCDC84Q86UT8 332 aaPredicted RBP23.1■■□□□ 1.29
COL20A1-204ENST00000455906 TMEM57Q8N5G2 664 aa23.1■■□□□ 1.29
COL20A1-204ENST00000455906 SLC45A1Q9Y2W3 748 aa23.1■■□□□ 1.29
COL20A1-204ENST00000455906 COL2A1P02458 1487 aaPredicted RBP23.1■■□□□ 1.29
COL20A1-204ENST00000455906 GSTO1P78417 241 aa23.09■■□□□ 1.29
COL20A1-204ENST00000455906 RAET1EQ8TD07 263 aa23.09■■□□□ 1.29
COL20A1-204ENST00000455906 ATAD5Q96QE3 1844 aa23.08■■□□□ 1.29
COL20A1-204ENST00000455906 FAM196BA6NMK8 535 aa23.08■■□□□ 1.29
COL20A1-204ENST00000455906 MAP4K4O95819 1239 aaPredicted RBP23.08■■□□□ 1.29
COL20A1-204ENST00000455906 LDHCP07864 332 aa23.08■■□□□ 1.29
COL20A1-204ENST00000455906 GRK4P32298 578 aa23.08■■□□□ 1.29
COL20A1-204ENST00000455906 PRKCZQ05513 592 aa23.08■■□□□ 1.29
COL20A1-204ENST00000455906 POLA2Q14181 598 aa23.08■■□□□ 1.29
COL20A1-204ENST00000455906 HABP4Q5JVS0 413 aaKnown RBP23.08■■□□□ 1.29
COL20A1-204ENST00000455906 SHISA4Q96DD7 197 aa23.08■■□□□ 1.29
COL20A1-204ENST00000455906 RAI14Q9P0K7 980 aa23.08■■□□□ 1.29
COL20A1-204ENST00000455906 MAST2Q6P0Q8 1798 aa23.07■■□□□ 1.28
COL20A1-204ENST00000455906 TRIM75PA6NK02 468 aa23.07■■□□□ 1.28
COL20A1-204ENST00000455906 FCGRTP55899 365 aa23.07■■□□□ 1.28
COL20A1-204ENST00000455906 OSBPL5Q9H0X9 879 aaPredicted RBP23.07■■□□□ 1.28
COL20A1-204ENST00000455906 SIPA1L1O43166 1804 aa23.06■■□□□ 1.28
COL20A1-204ENST00000455906 UQCRFS1P1P0C7P4 283 aa23.06■■□□□ 1.28
COL20A1-204ENST00000455906 ZKSCAN2Q63HK3 967 aa23.06■■□□□ 1.28
COL20A1-204ENST00000455906 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.06■■□□□ 1.28
COL20A1-204ENST00000455906 GPR108Q9NPR9 543 aa23.06■■□□□ 1.28
COL20A1-204ENST00000455906 GABRQQ9UN88 632 aa23.06■■□□□ 1.28
COL20A1-204ENST00000455906 LOC285556D6RIA3 1793 aa23.06■■□□□ 1.28
COL20A1-204ENST00000455906 MYO5AQ9Y4I1 1855 aaKnown RBP23.05■■□□□ 1.28
COL20A1-204ENST00000455906 TNNI3KQ59H18 835 aa23.05■■□□□ 1.28
COL20A1-204ENST00000455906 SSH3Q8TE77 659 aa23.05■■□□□ 1.28
COL20A1-204ENST00000455906 LRP2BPQ9P2M1 347 aa23.05■■□□□ 1.28
COL20A1-204ENST00000455906 AGTPBP1Q9UPW5 1226 aa23.05■■□□□ 1.28
COL20A1-204ENST00000455906 FPGT-TNNI3KV9GXZ4 949 aa23.05■■□□□ 1.28
COL20A1-204ENST00000455906 CDK5RAP2Q96SN8 1893 aa23.05■■□□□ 1.28
COL20A1-204ENST00000455906 DOCK3Q8IZD9 2030 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms