RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 MECOMQ03112 1051 aa19.89■□□□□ 0.77
GPC1-206ENST00000455111 FOCADQ5VW36 1801 aa19.89■□□□□ 0.77
GPC1-206ENST00000455111 MIER1Q8N108 512 aa19.89■□□□□ 0.77
GPC1-206ENST00000455111 ZCCHC17Q9NP64 241 aaKnown RBP19.89■□□□□ 0.77
GPC1-206ENST00000455111 ABCF2Q9UG63 623 aa19.89■□□□□ 0.77
GPC1-206ENST00000455111 ENTPD3O75355 529 aa19.88■□□□□ 0.77
GPC1-206ENST00000455111 GNAI2P04899 355 aa19.88■□□□□ 0.77
GPC1-206ENST00000455111 RLBP1P12271 317 aa19.88■□□□□ 0.77
GPC1-206ENST00000455111 EN2P19622 333 aaPredicted RBP19.88■□□□□ 0.77
GPC1-206ENST00000455111 ARID4AP29374 1257 aaPredicted RBP19.88■□□□□ 0.77
GPC1-206ENST00000455111 MCAMP43121 646 aa19.88■□□□□ 0.77
GPC1-206ENST00000455111 POLA2Q14181 598 aa19.88■□□□□ 0.77
GPC1-206ENST00000455111 HOOK2Q96ED9 719 aa19.88■□□□□ 0.77
GPC1-206ENST00000455111 ZNF333Q96JL9 665 aa19.88■□□□□ 0.77
GPC1-206ENST00000455111 HDAC5Q9UQL6 1122 aa19.88■□□□□ 0.77
GPC1-206ENST00000455111 GPR75-ASB3A0A0A6YYF3 556 aa19.87■□□□□ 0.77
GPC1-206ENST00000455111 ECM2O94769 699 aaPredicted RBP19.87■□□□□ 0.77
GPC1-206ENST00000455111 LACTBP83111 547 aaPredicted RBP19.87■□□□□ 0.77
GPC1-206ENST00000455111 ANKRD23Q86SG2 305 aa19.87■□□□□ 0.77
GPC1-206ENST00000455111 CCDC84Q86UT8 332 aaPredicted RBP19.87■□□□□ 0.77
GPC1-206ENST00000455111 NSUN4Q96CB9 384 aaKnown RBP19.87■□□□□ 0.77
GPC1-206ENST00000455111 NEUROD6Q96NK8 337 aa19.87■□□□□ 0.77
GPC1-206ENST00000455111 CPA4Q9UI42 421 aa19.87■□□□□ 0.77
GPC1-206ENST00000455111 PDHXO00330 501 aa19.86■□□□□ 0.77
GPC1-206ENST00000455111 RRP1BQ14684 758 aaKnown RBP19.86■□□□□ 0.77
GPC1-206ENST00000455111 MVPQ14764 893 aaKnown RBP19.86■□□□□ 0.77
GPC1-206ENST00000455111 PRPF38BQ5VTL8 546 aaKnown RBP19.86■□□□□ 0.77
GPC1-206ENST00000455111 DZIP1Q86YF9 867 aaKnown RBP19.86■□□□□ 0.77
GPC1-206ENST00000455111 C1orf115Q9H7X2 142 aa19.86■□□□□ 0.77
GPC1-206ENST00000455111 AKAP2Q9Y2D5 859 aa19.86■□□□□ 0.77
GPC1-206ENST00000455111 LOC285556D6RIA3 1793 aa19.85■□□□□ 0.77
GPC1-206ENST00000455111 FAM196BA6NMK8 535 aa19.85■□□□□ 0.77
GPC1-206ENST00000455111 PICALMQ13492 652 aa19.85■□□□□ 0.77
GPC1-206ENST00000455111 ZGPATQ8N5A5 531 aaKnown RBP19.85■□□□□ 0.77
GPC1-206ENST00000455111 SPATA5Q8NB90 893 aa19.85■□□□□ 0.77
GPC1-206ENST00000455111 IPO8O15397 1037 aaKnown RBP19.84■□□□□ 0.77
GPC1-206ENST00000455111 PTPRAP18433 802 aa19.84■□□□□ 0.77
GPC1-206ENST00000455111 SCYL3Q8IZE3 742 aa19.84■□□□□ 0.77
GPC1-206ENST00000455111 SSH3Q8TE77 659 aa19.84■□□□□ 0.77
GPC1-206ENST00000455111 SH3TC2Q8TF17 1288 aa19.84■□□□□ 0.77
GPC1-206ENST00000455111 TRIM47Q96LD4 638 aa19.84■□□□□ 0.77
GPC1-206ENST00000455111 AFG3L2Q9Y4W6 797 aa19.84■□□□□ 0.77
GPC1-206ENST00000455111 KIAA0100Q14667 2235 aaKnown RBP19.84■□□□□ 0.77
GPC1-206ENST00000455111 CYP2C8P10632 490 aa19.83■□□□□ 0.77
GPC1-206ENST00000455111 ZKSCAN2Q63HK3 967 aa19.83■□□□□ 0.77
GPC1-206ENST00000455111 ERICH6Q7L0X2 663 aa19.83■□□□□ 0.77
GPC1-206ENST00000455111 DBNDD2Q9BQY9 259 aa19.83■□□□□ 0.77
GPC1-206ENST00000455111 A0A0G2JLL6 359 aaPredicted RBP19.82■□□□□ 0.76
GPC1-206ENST00000455111 BCRP11274 1271 aa19.82■□□□□ 0.76
GPC1-206ENST00000455111 ATP8B2P98198 1209 aa19.82■□□□□ 0.76
GPC1-206ENST00000455111 PRRT2Q7Z6L0 340 aaPredicted RBP19.82■□□□□ 0.76
GPC1-206ENST00000455111 ADGRA1Q86SQ6 560 aa19.82■□□□□ 0.76
GPC1-206ENST00000455111 ZHX2Q9Y6X8 837 aa19.82■□□□□ 0.76
GPC1-206ENST00000455111 COL2A1P02458 1487 aaPredicted RBP19.81■□□□□ 0.76
GPC1-206ENST00000455111 CXCL11O14625 94 aa19.81■□□□□ 0.76
GPC1-206ENST00000455111 ZBTB7BO15156 539 aaPredicted RBP19.81■□□□□ 0.76
GPC1-206ENST00000455111 HNRNPUQ00839 825 aaKnown RBP eCLIP19.81■□□□□ 0.76
GPC1-206ENST00000455111 TNNI3KQ59H18 835 aa19.81■□□□□ 0.76
GPC1-206ENST00000455111 SPTY2D1Q68D10 685 aaPredicted RBP19.81■□□□□ 0.76
GPC1-206ENST00000455111 SNRKQ9NRH2 765 aa19.81■□□□□ 0.76
GPC1-206ENST00000455111 TLR7Q9NYK1 1049 aaKnown RBP19.81■□□□□ 0.76
GPC1-206ENST00000455111 FPGT-TNNI3KV9GXZ4 949 aa19.81■□□□□ 0.76
GPC1-206ENST00000455111 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
GPC1-206ENST00000455111 MYCP01106 439 aaPredicted RBP19.8■□□□□ 0.76
GPC1-206ENST00000455111 OSBPP22059 807 aa19.8■□□□□ 0.76
GPC1-206ENST00000455111 G3BP1Q13283 466 aaKnown RBP eCLIP19.8■□□□□ 0.76
GPC1-206ENST00000455111 CYP2E1P05181 493 aaPredicted RBP19.79■□□□□ 0.76
GPC1-206ENST00000455111 PSMC4P43686 418 aa19.79■□□□□ 0.76
GPC1-206ENST00000455111 JAG1P78504 1218 aa19.79■□□□□ 0.76
GPC1-206ENST00000455111 MTFR1Q15390 333 aa19.79■□□□□ 0.76
GPC1-206ENST00000455111 SLC9C1Q4G0N8 1177 aa19.79■□□□□ 0.76
GPC1-206ENST00000455111 ZSCAN29Q8IWY8 852 aaPredicted RBP19.79■□□□□ 0.76
GPC1-206ENST00000455111 SH3RF3Q8TEJ3 882 aaPredicted RBP19.79■□□□□ 0.76
GPC1-206ENST00000455111 OSBPL5Q9H0X9 879 aaPredicted RBP19.79■□□□□ 0.76
GPC1-206ENST00000455111 GPR108Q9NPR9 543 aa19.79■□□□□ 0.76
GPC1-206ENST00000455111 DOCK3Q8IZD9 2030 aa19.78■□□□□ 0.76
GPC1-206ENST00000455111 TBC1D12O60347 775 aa19.78■□□□□ 0.76
GPC1-206ENST00000455111 SHROOM1Q2M3G4 852 aaPredicted RBP19.78■□□□□ 0.76
GPC1-206ENST00000455111 SHISA4Q96DD7 197 aa19.78■□□□□ 0.76
GPC1-206ENST00000455111 RAI14Q9P0K7 980 aa19.78■□□□□ 0.76
GPC1-206ENST00000455111 SRRDQ9UH36 339 aa19.78■□□□□ 0.76
GPC1-206ENST00000455111 DBNLQ9UJU6 430 aaKnown RBP19.78■□□□□ 0.76
GPC1-206ENST00000455111 NOP58Q9Y2X3 529 aaKnown RBP19.78■□□□□ 0.76
GPC1-206ENST00000455111 PLXNB2O15031 1838 aa19.77■□□□□ 0.76
GPC1-206ENST00000455111 CTNND1O60716 968 aaKnown RBP19.77■□□□□ 0.76
GPC1-206ENST00000455111 TREML2Q5T2D2 321 aa19.77■□□□□ 0.76
GPC1-206ENST00000455111 SLF2Q8IX21 1173 aa19.77■□□□□ 0.76
GPC1-206ENST00000455111 DNAJC18Q9H819 358 aa19.77■□□□□ 0.76
GPC1-206ENST00000455111 PIH1D3Q9NQM4 214 aaKnown RBP19.77■□□□□ 0.76
GPC1-206ENST00000455111 GABRQQ9UN88 632 aa19.77■□□□□ 0.76
GPC1-206ENST00000455111 EAF2Q96CJ1 260 aaPredicted RBP19.76■□□□□ 0.75
GPC1-206ENST00000455111 NDUFB9Q9Y6M9 179 aa19.76■□□□□ 0.75
GPC1-206ENST00000455111 TRIM75PA6NK02 468 aa19.75■□□□□ 0.75
GPC1-206ENST00000455111 SURF6O75683 361 aaKnown RBP19.75■□□□□ 0.75
GPC1-206ENST00000455111 UQCRFS1P1P0C7P4 283 aa19.75■□□□□ 0.75
GPC1-206ENST00000455111 ZAP70P43403 619 aa19.75■□□□□ 0.75
GPC1-206ENST00000455111 PRKCZQ05513 592 aa19.75■□□□□ 0.75
GPC1-206ENST00000455111 GORABQ5T7V8 394 aa19.75■□□□□ 0.75
GPC1-206ENST00000455111 GADL1Q6ZQY3 521 aa19.75■□□□□ 0.75
GPC1-206ENST00000455111 DDX60LQ5H9U9 1706 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms