RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 SEPT6Q14141 434 aa5.7□□□□□ -1.5
HMGB1P15-201ENST00000453854 SEZ6Q53EL9 994 aa5.7□□□□□ -1.5
HMGB1P15-201ENST00000453854 HGSNATQ68CP4 663 aa5.7□□□□□ -1.5
HMGB1P15-201ENST00000453854 REC114Q7Z4M0 266 aa5.7□□□□□ -1.5
HMGB1P15-201ENST00000453854 FBXO11Q86XK2 927 aa5.7□□□□□ -1.5
HMGB1P15-201ENST00000453854 FAM177A1Q8N128 213 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P15-201ENST00000453854 OSGEPQ9NPF4 335 aa5.7□□□□□ -1.5
HMGB1P15-201ENST00000453854 KLF4O43474 513 aa5.69□□□□□ -1.5
HMGB1P15-201ENST00000453854 SMARCA5O60264 1052 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P15-201ENST00000453854 LMNB1P20700 586 aa5.69□□□□□ -1.5
HMGB1P15-201ENST00000453854 C19orf57Q0VDD7 668 aa5.69□□□□□ -1.5
HMGB1P15-201ENST00000453854 CWF19L2Q2TBE0 894 aaKnown RBP5.69□□□□□ -1.5
HMGB1P15-201ENST00000453854 MPRIPQ6WCQ1 1025 aa5.69□□□□□ -1.5
HMGB1P15-201ENST00000453854 CKAP2LQ8IYA6 745 aa5.69□□□□□ -1.5
HMGB1P15-201ENST00000453854 JARID2Q92833 1246 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P15-201ENST00000453854 SHDQ96IW2 340 aa5.69□□□□□ -1.5
HMGB1P15-201ENST00000453854 SRRTQ9BXP5 876 aaKnown RBP5.69□□□□□ -1.5
HMGB1P15-201ENST00000453854 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
HMGB1P15-201ENST00000453854 OSBPL2Q9H1P3 480 aa5.69□□□□□ -1.5
HMGB1P15-201ENST00000453854 EHMT1Q9H9B1 1298 aa5.69□□□□□ -1.5
HMGB1P15-201ENST00000453854 USP21Q9UK80 565 aa5.69□□□□□ -1.5
HMGB1P15-201ENST00000453854 FSCN2O14926 492 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 TLR3O15455 904 aaKnown RBP5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 ATE1O95260 518 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 CYP11A1P05108 521 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 H2AFB1P0C5Y9 115 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 H2AFB2P0C5Z0 115 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 CANXP27824 592 aaKnown RBP5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 NOS3P29474 1203 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 GIPRP48546 466 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 ZNF165P49910 485 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 RPL6Q02878 288 aaKnown RBP5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 WFDC8Q8IUA0 241 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 RBBP8NLQ8NC74 664 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 PMFBP1Q8TBY8 1022 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 MKL1Q969V6 931 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 TP53INP1Q96A56 240 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 PIF1Q9H611 641 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 CBX8Q9HC52 389 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 KRT82Q9NSB4 513 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 PRKAG3Q9UGI9 489 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 ZNRF3Q9ULT6 936 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 PRR36Q9H6K5 1346 aa5.68□□□□□ -1.5
HMGB1P15-201ENST00000453854 LINC01387J3KSC0 135 aa5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 GFRA2O00451 464 aa5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 IREB2P48200 963 aaKnown RBP5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 ARL4DP49703 201 aa5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 GSTM4Q03013 218 aa5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 RAB33AQ14088 237 aa5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 MAP1SQ66K74 1059 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 DIEXFQ68CQ4 756 aaKnown RBP5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 FAM117BQ6P1L5 589 aa5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 ANKS3Q6ZW76 656 aa5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 DTWD1Q8N5C7 304 aa5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 WFDC12Q8WWY7 111 aa5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 ZSWIM4Q9H7M6 989 aa5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 BRMS1Q9HCU9 246 aa5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 PPT2Q9UMR5 302 aa5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 POLR3KQ9Y2Y1 108 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 MRVI1Q9Y6F6 885 aa5.67□□□□□ -1.5
HMGB1P15-201ENST00000453854 DLL1O00548 723 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 ECEL1O95672 775 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 BPNT1O95861 308 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 IMPDH2P12268 514 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 HSP90B1P14625 803 aaKnown RBP5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 CLCQ05315 142 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 SETDB1Q15047 1291 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 POU4F3Q15319 338 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 ZNF746Q6NUN9 644 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 MAP4K3Q8IVH8 894 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 KLHL23Q8NBE8 558 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 OR6P1Q8NGX9 317 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 GPBAR1Q8TDU6 330 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 CPLX3Q8WVH0 158 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 SLC7A3Q8WY07 619 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 KLHDC7BQ96G42 594 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 MEGF10Q96KG7 1140 aa5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 CCDC86Q9H6F5 360 aaKnown RBP5.66□□□□□ -1.5
HMGB1P15-201ENST00000453854 SCO2A0A1W2PP80 73 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 TLDC2A0PJX2 215 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 ALX3O95076 343 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 MAOBP27338 520 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 CDC25BP30305 580 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 MCM4P33991 863 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 EIF6P56537 245 aaKnown RBP5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 NFE2L2Q16236 605 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 TNNI3KQ59H18 835 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 ARTNQ5T4W7 220 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 TXNDC11Q6PKC3 985 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 IGF2-ASQ6U949 168 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 CCDC81Q6ZN84 652 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 FAM169BQ8N8A8 192 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 GALNT11Q8NCW6 608 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 KCNB2Q92953 911 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 ANAPC16Q96DE5 110 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 CORO1BQ9BR76 489 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 SIRPGQ9P1W8 387 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 TBX22Q9Y458 520 aa5.65□□□□□ -1.5
HMGB1P15-201ENST00000453854 TACC3Q9Y6A5 838 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms