RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 SERPINA10Q9UK55 444 aa10.6□□□□□ -0.71
COL28A1-205ENST00000453441 IQSEC3Q9UPP2 1182 aaPredicted RBP10.6□□□□□ -0.71
COL28A1-205ENST00000453441 POTECB2RU33 542 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 SMARCA5O60264 1052 aaPredicted RBP10.59□□□□□ -0.71
COL28A1-205ENST00000453441 GLRX3O76003 335 aaKnown RBP10.59□□□□□ -0.71
COL28A1-205ENST00000453441 LDHBP07195 334 aaKnown RBP10.59□□□□□ -0.71
COL28A1-205ENST00000453441 MX1P20591 662 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 GSTO1P78417 241 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 HHIPL2Q6UWX4 724 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 ERICH6Q7L0X2 663 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 LAPTM4BQ86VI4 370 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 LDHDQ86WU2 507 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 TICAM2Q86XR7 235 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 KIAA0825Q8IV33 1275 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 CERS5Q8N5B7 392 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 ZNF526Q8TF50 670 aaPredicted RBP10.59□□□□□ -0.71
COL28A1-205ENST00000453441 CCDC136Q96JN2 1154 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 CDHR5Q9HBB8 845 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 MYOZ2Q9NPC6 264 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 NMRK2Q9NPI5 230 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 PPP4R2Q9NY27 417 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 STAP2Q9UGK3 403 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 TTF2Q9UNY4 1162 aaKnown RBP10.59□□□□□ -0.71
COL28A1-205ENST00000453441 MAST2Q6P0Q8 1798 aa10.59□□□□□ -0.71
COL28A1-205ENST00000453441 MYO1BO43795 1136 aa10.58□□□□□ -0.72
COL28A1-205ENST00000453441 TOMM70O94826 608 aa10.58□□□□□ -0.72
COL28A1-205ENST00000453441 MAP4K4O95819 1239 aaPredicted RBP10.58□□□□□ -0.72
COL28A1-205ENST00000453441 LDHCP07864 332 aa10.58□□□□□ -0.72
COL28A1-205ENST00000453441 EPS15P42566 896 aa10.58□□□□□ -0.72
COL28A1-205ENST00000453441 KIF4BQ2VIQ3 1234 aa10.58□□□□□ -0.72
COL28A1-205ENST00000453441 LRRFIP1Q32MZ4 808 aaKnown RBP10.58□□□□□ -0.72
COL28A1-205ENST00000453441 DZIP1Q86YF9 867 aaKnown RBP10.58□□□□□ -0.72
COL28A1-205ENST00000453441 CERS3Q8IU89 383 aa10.58□□□□□ -0.72
COL28A1-205ENST00000453441 RBM46Q8TBY0 533 aaKnown RBP10.58□□□□□ -0.72
COL28A1-205ENST00000453441 TEKT1Q969V4 418 aa10.58□□□□□ -0.72
COL28A1-205ENST00000453441 HAUS7Q99871 368 aa10.58□□□□□ -0.72
COL28A1-205ENST00000453441 NPDC1Q9NQX5 325 aaPredicted RBP10.58□□□□□ -0.72
COL28A1-205ENST00000453441 SALL3Q9BXA9 1300 aa10.58□□□□□ -0.72
COL28A1-205ENST00000453441 ECM29Q5VYK3 1845 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 GOLGA8CPA6NN73 597 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 MAP3K12Q12852 859 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 SCARF1Q14162 830 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 DLGAP5Q15398 846 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 B4GALNT3Q6L9W6 998 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 ZSCAN25Q6NSZ9 544 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 MXD3Q9BW11 206 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 LNPKQ9C0E8 428 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.57□□□□□ -0.72
COL28A1-205ENST00000453441 OSBPL3Q9H4L5 887 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 LRP2BPQ9P2M1 347 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 ABCF2Q9UG63 623 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 PGAP2Q9UHJ9 254 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 JAG2Q9Y219 1238 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 ADAMTSL1Q8N6G6 1762 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 PITPNM2Q9BZ72 1349 aa10.57□□□□□ -0.72
COL28A1-205ENST00000453441 DOCK2Q92608 1830 aa10.56□□□□□ -0.72
COL28A1-205ENST00000453441 CYP2E1P05181 493 aaPredicted RBP10.56□□□□□ -0.72
COL28A1-205ENST00000453441 PRDX5P30044 214 aa10.56□□□□□ -0.72
COL28A1-205ENST00000453441 ZAP70P43403 619 aa10.56□□□□□ -0.72
COL28A1-205ENST00000453441 CRKP46108 304 aa10.56□□□□□ -0.72
COL28A1-205ENST00000453441 PDE1AP54750 535 aa10.56□□□□□ -0.72
COL28A1-205ENST00000453441 FSTL1Q12841 308 aa10.56□□□□□ -0.72
COL28A1-205ENST00000453441 SMC1BQ8NDV3 1235 aa10.56□□□□□ -0.72
COL28A1-205ENST00000453441 ZBED3Q96IU2 234 aaPredicted RBP10.56□□□□□ -0.72
COL28A1-205ENST00000453441 ZDHHC15Q96MV8 337 aa10.56□□□□□ -0.72
COL28A1-205ENST00000453441 PAG1Q9NWQ8 432 aa10.56□□□□□ -0.72
COL28A1-205ENST00000453441 RAI14Q9P0K7 980 aa10.56□□□□□ -0.72
COL28A1-205ENST00000453441 TSKSQ9UJT2 592 aa10.56□□□□□ -0.72
COL28A1-205ENST00000453441 GAKO14976 1311 aa10.56□□□□□ -0.72
COL28A1-205ENST00000453441 F8W031 263 aaPredicted RBP10.55□□□□□ -0.72
COL28A1-205ENST00000453441 TNFAIP1Q13829 316 aa10.55□□□□□ -0.72
COL28A1-205ENST00000453441 CFAP100Q494V2 611 aa10.55□□□□□ -0.72
COL28A1-205ENST00000453441 TBC1D10BQ4KMP7 808 aaPredicted RBP10.55□□□□□ -0.72
COL28A1-205ENST00000453441 EAPPQ56P03 285 aaPredicted RBP10.55□□□□□ -0.72
COL28A1-205ENST00000453441 PI16Q6UXB8 463 aa10.55□□□□□ -0.72
COL28A1-205ENST00000453441 SAMD7Q7Z3H4 446 aa10.55□□□□□ -0.72
COL28A1-205ENST00000453441 APOBEC3FQ8IUX4 373 aaKnown RBP10.55□□□□□ -0.72
COL28A1-205ENST00000453441 PI4K2BQ8TCG2 481 aa10.55□□□□□ -0.72
COL28A1-205ENST00000453441 TRPM4Q8TD43 1214 aa10.55□□□□□ -0.72
COL28A1-205ENST00000453441 DCPSQ96C86 337 aaKnown RBP10.55□□□□□ -0.72
COL28A1-205ENST00000453441 NSUN4Q96CB9 384 aaKnown RBP10.55□□□□□ -0.72
COL28A1-205ENST00000453441 DNAJC2Q99543 621 aaKnown RBP10.55□□□□□ -0.72
COL28A1-205ENST00000453441 NOL10Q9BSC4 688 aaKnown RBP10.55□□□□□ -0.72
COL28A1-205ENST00000453441 BOLA2Q9H3K6 86 aa10.55□□□□□ -0.72
COL28A1-205ENST00000453441 SNRKQ9NRH2 765 aa10.55□□□□□ -0.72
COL28A1-205ENST00000453441 TMOD2Q9NZR1 351 aa10.55□□□□□ -0.72
COL28A1-205ENST00000453441 MYH2Q9UKX2 1941 aa10.54□□□□□ -0.72
COL28A1-205ENST00000453441 RFX7Q2KHR2 1363 aa10.54□□□□□ -0.72
COL28A1-205ENST00000453441 TULP1O00294 542 aaPredicted RBP10.54□□□□□ -0.72
COL28A1-205ENST00000453441 GOLIM4O00461 696 aa10.54□□□□□ -0.72
COL28A1-205ENST00000453441 WNT10BO00744 389 aa10.54□□□□□ -0.72
COL28A1-205ENST00000453441 BAG3O95817 575 aa10.54□□□□□ -0.72
COL28A1-205ENST00000453441 ZFYP08048 801 aaPredicted RBP10.54□□□□□ -0.72
COL28A1-205ENST00000453441 RBM5P52756 815 aaKnown RBP eCLIP10.54□□□□□ -0.72
COL28A1-205ENST00000453441 MECOMQ03112 1051 aa10.54□□□□□ -0.72
COL28A1-205ENST00000453441 PTGDRQ13258 359 aa10.54□□□□□ -0.72
COL28A1-205ENST00000453441 FKBP1CQ5VVH2 108 aa10.54□□□□□ -0.72
COL28A1-205ENST00000453441 NAA16Q6N069 864 aaPredicted RBP10.54□□□□□ -0.72
COL28A1-205ENST00000453441 PLEKHM2Q8IWE5 1019 aa10.54□□□□□ -0.72
COL28A1-205ENST00000453441 BCL11AQ9H165 835 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms