RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 MECOMQ03112 1051 aa22.66■■□□□ 1.22
PDLIM2-214ENST00000452226 PI16Q6UXB8 463 aa22.66■■□□□ 1.22
PDLIM2-214ENST00000452226 ZSCAN29Q8IWY8 852 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-214ENST00000452226 KCNH4Q9UQ05 1017 aa22.66■■□□□ 1.22
PDLIM2-214ENST00000452226 ATRNL1Q5VV63 1379 aa22.65■■□□□ 1.22
PDLIM2-214ENST00000452226 POLA2Q14181 598 aa22.65■■□□□ 1.22
PDLIM2-214ENST00000452226 SH3BP5LQ7L8J4 393 aa22.65■■□□□ 1.22
PDLIM2-214ENST00000452226 SPATA5Q8NB90 893 aa22.65■■□□□ 1.22
PDLIM2-214ENST00000452226 SSH3Q8TE77 659 aa22.65■■□□□ 1.22
PDLIM2-214ENST00000452226 ARID4AP29374 1257 aaPredicted RBP22.64■■□□□ 1.21
PDLIM2-214ENST00000452226 PICALMQ13492 652 aa22.64■■□□□ 1.21
PDLIM2-214ENST00000452226 ZNF384Q8TF68 577 aa22.64■■□□□ 1.21
PDLIM2-214ENST00000452226 ARMC5Q96C12 935 aa22.64■■□□□ 1.21
PDLIM2-214ENST00000452226 C1orf115Q9H7X2 142 aa22.64■■□□□ 1.21
PDLIM2-214ENST00000452226 DDX4Q9NQI0 724 aaKnown RBP22.64■■□□□ 1.21
PDLIM2-214ENST00000452226 GPR75-ASB3A0A0A6YYF3 556 aa22.63■■□□□ 1.21
PDLIM2-214ENST00000452226 PHF20L1A8MW92 1017 aa22.63■■□□□ 1.21
PDLIM2-214ENST00000452226 TBC1D9Q6ZT07 1266 aa22.63■■□□□ 1.21
PDLIM2-214ENST00000452226 ANKRD23Q86SG2 305 aa22.63■■□□□ 1.21
PDLIM2-214ENST00000452226 NBPF11Q86T75 865 aa22.63■■□□□ 1.21
PDLIM2-214ENST00000452226 YTHDC1Q96MU7 727 aaKnown RBP22.63■■□□□ 1.21
PDLIM2-214ENST00000452226 TMEM106CQ9BVX2 250 aa22.63■■□□□ 1.21
PDLIM2-214ENST00000452226 ZSWIM8A7E2V4 1837 aa22.63■■□□□ 1.21
PDLIM2-214ENST00000452226 POTEFA5A3E0 1075 aa22.62■■□□□ 1.21
PDLIM2-214ENST00000452226 DDTLA6NHG4 134 aaPredicted RBP22.62■■□□□ 1.21
PDLIM2-214ENST00000452226 PDHXO00330 501 aa22.62■■□□□ 1.21
PDLIM2-214ENST00000452226 GSTO1P78417 241 aa22.62■■□□□ 1.21
PDLIM2-214ENST00000452226 LACTBP83111 547 aaPredicted RBP22.62■■□□□ 1.21
PDLIM2-214ENST00000452226 PDE3AQ14432 1141 aa22.62■■□□□ 1.21
PDLIM2-214ENST00000452226 KIF22Q14807 665 aa22.62■■□□□ 1.21
PDLIM2-214ENST00000452226 RAI14Q9P0K7 980 aa22.62■■□□□ 1.21
PDLIM2-214ENST00000452226 PTCH2Q9Y6C5 1203 aa22.62■■□□□ 1.21
PDLIM2-214ENST00000452226 RBBP6Q7Z6E9 1792 aaKnown RBP22.61■■□□□ 1.21
PDLIM2-214ENST00000452226 CXCL11O14625 94 aa22.61■■□□□ 1.21
PDLIM2-214ENST00000452226 LDHCP07864 332 aa22.61■■□□□ 1.21
PDLIM2-214ENST00000452226 UQCRFS1P1P0C7P4 283 aa22.61■■□□□ 1.21
PDLIM2-214ENST00000452226 MCAMP43121 646 aa22.61■■□□□ 1.21
PDLIM2-214ENST00000452226 RHBDL3P58872 404 aa22.61■■□□□ 1.21
PDLIM2-214ENST00000452226 OS9Q13438 667 aaPredicted RBP22.61■■□□□ 1.21
PDLIM2-214ENST00000452226 MOGSQ13724 837 aa22.61■■□□□ 1.21
PDLIM2-214ENST00000452226 SCYL3Q8IZE3 742 aa22.61■■□□□ 1.21
PDLIM2-214ENST00000452226 NSUN4Q96CB9 384 aaKnown RBP22.61■■□□□ 1.21
PDLIM2-214ENST00000452226 ARHGAP39Q9C0H5 1083 aa22.61■■□□□ 1.21
PDLIM2-214ENST00000452226 PICK1Q9NRD5 415 aa22.61■■□□□ 1.21
PDLIM2-214ENST00000452226 DDX19BQ9UMR2 479 aa22.61■■□□□ 1.21
PDLIM2-214ENST00000452226 COG6Q9Y2V7 657 aa22.61■■□□□ 1.21
PDLIM2-214ENST00000452226 MKI67P46013 3256 aaKnown RBP22.6■■□□□ 1.21
PDLIM2-214ENST00000452226 MAP3K10Q02779 954 aa22.6■■□□□ 1.21
PDLIM2-214ENST00000452226 CEP85Q6P2H3 762 aa22.6■■□□□ 1.21
PDLIM2-214ENST00000452226 C17orf99Q6UX52 265 aa22.6■■□□□ 1.21
PDLIM2-214ENST00000452226 GPR108Q9NPR9 543 aa22.6■■□□□ 1.21
PDLIM2-214ENST00000452226 CPA4Q9UI42 421 aa22.6■■□□□ 1.21
PDLIM2-214ENST00000452226 ZHX2Q9Y6X8 837 aa22.6■■□□□ 1.21
PDLIM2-214ENST00000452226 SLURP2P0DP57 97 aa22.59■■□□□ 1.21
PDLIM2-214ENST00000452226 SLC9C1Q4G0N8 1177 aa22.59■■□□□ 1.21
PDLIM2-214ENST00000452226 C20orf194Q5TEA3 1177 aa22.59■■□□□ 1.21
PDLIM2-214ENST00000452226 ZBTB40Q9NUA8 1239 aa22.59■■□□□ 1.21
PDLIM2-214ENST00000452226 LRP2BPQ9P2M1 347 aa22.59■■□□□ 1.21
PDLIM2-214ENST00000452226 DOCK1Q14185 1865 aa22.59■■□□□ 1.21
PDLIM2-214ENST00000452226 NPM3O75607 178 aaKnown RBP22.58■■□□□ 1.21
PDLIM2-214ENST00000452226 SURF6O75683 361 aaKnown RBP22.58■■□□□ 1.21
PDLIM2-214ENST00000452226 ECM2O94769 699 aaPredicted RBP22.58■■□□□ 1.21
PDLIM2-214ENST00000452226 PTPRAP18433 802 aa22.58■■□□□ 1.21
PDLIM2-214ENST00000452226 TNNI3KQ59H18 835 aa22.58■■□□□ 1.21
PDLIM2-214ENST00000452226 TTC39AQ5SRH9 613 aa22.58■■□□□ 1.21
PDLIM2-214ENST00000452226 ZNF333Q96JL9 665 aa22.58■■□□□ 1.21
PDLIM2-214ENST00000452226 NOP58Q9Y2X3 529 aaKnown RBP22.58■■□□□ 1.21
PDLIM2-214ENST00000452226 FPGT-TNNI3KV9GXZ4 949 aa22.58■■□□□ 1.21
PDLIM2-214ENST00000452226 PTPRFP10586 1907 aa22.58■■□□□ 1.21
PDLIM2-214ENST00000452226 BRCA2P51587 3418 aa22.57■■□□□ 1.2
PDLIM2-214ENST00000452226 CTNND1O60716 968 aaKnown RBP22.57■■□□□ 1.2
PDLIM2-214ENST00000452226 MAP4K4O95819 1239 aaPredicted RBP22.57■■□□□ 1.2
PDLIM2-214ENST00000452226 GNRH1P01148 92 aa22.57■■□□□ 1.2
PDLIM2-214ENST00000452226 GPAT2Q6NUI2 795 aa22.57■■□□□ 1.2
PDLIM2-214ENST00000452226 DBNDD2Q9BQY9 259 aa22.57■■□□□ 1.2
PDLIM2-214ENST00000452226 SNRKQ9NRH2 765 aa22.57■■□□□ 1.2
PDLIM2-214ENST00000452226 PHIPQ8WWQ0 1821 aa22.57■■□□□ 1.2
PDLIM2-214ENST00000452226 ADGRA2Q96PE1 1338 aa22.57■■□□□ 1.2
PDLIM2-214ENST00000452226 MYO5AQ9Y4I1 1855 aaKnown RBP22.56■■□□□ 1.2
PDLIM2-214ENST00000452226 CCDC158Q5M9N0 1113 aa22.56■■□□□ 1.2
PDLIM2-214ENST00000452226 FASTKD5Q7L8L6 764 aaKnown RBP22.56■■□□□ 1.2
PDLIM2-214ENST00000452226 PARK7Q99497 189 aaKnown RBP22.56■■□□□ 1.2
PDLIM2-214ENST00000452226 AFG3L2Q9Y4W6 797 aa22.56■■□□□ 1.2
PDLIM2-214ENST00000452226 A0A0G2JLL6 359 aaPredicted RBP22.55■■□□□ 1.2
PDLIM2-214ENST00000452226 TBC1D12O60347 775 aa22.55■■□□□ 1.2
PDLIM2-214ENST00000452226 PRRT2Q7Z6L0 340 aaPredicted RBP22.55■■□□□ 1.2
PDLIM2-214ENST00000452226 CHMP4BQ9H444 224 aaKnown RBP22.55■■□□□ 1.2
PDLIM2-214ENST00000452226 FAM196BA6NMK8 535 aa22.54■■□□□ 1.2
PDLIM2-214ENST00000452226 EN2P19622 333 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-214ENST00000452226 PSMC4P43686 418 aa22.54■■□□□ 1.2
PDLIM2-214ENST00000452226 PRMT2P55345 433 aa22.54■■□□□ 1.2
PDLIM2-214ENST00000452226 SLC4A8Q2Y0W8 1093 aa22.54■■□□□ 1.2
PDLIM2-214ENST00000452226 GADL1Q6ZQY3 521 aa22.54■■□□□ 1.2
PDLIM2-214ENST00000452226 TEX11Q8IYF3 940 aa22.54■■□□□ 1.2
PDLIM2-214ENST00000452226 TRIM47Q96LD4 638 aa22.54■■□□□ 1.2
PDLIM2-214ENST00000452226 NOL10Q9BSC4 688 aaKnown RBP22.54■■□□□ 1.2
PDLIM2-214ENST00000452226 OSBPL5Q9H0X9 879 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-214ENST00000452226 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.54■■□□□ 1.2
PDLIM2-214ENST00000452226 COL2A1P02458 1487 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-214ENST00000452226 CYP2C8P10632 490 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms