RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 CNKSR2Q8WXI2 1034 aa19.65■□□□□ 0.74
SCAMP4-205ENST00000452128 HAUS7Q99871 368 aa19.65■□□□□ 0.74
SCAMP4-205ENST00000452128 TCRBV5S4A2TA0A5A2 114 aa19.64■□□□□ 0.73
SCAMP4-205ENST00000452128 DCAF15Q66K64 600 aa19.64■□□□□ 0.73
SCAMP4-205ENST00000452128 ZKSCAN4Q969J2 545 aaPredicted RBP19.64■□□□□ 0.73
SCAMP4-205ENST00000452128 EDC3Q96F86 508 aaKnown RBP19.64■□□□□ 0.73
SCAMP4-205ENST00000452128 BEGAINQ9BUH8 593 aa19.64■□□□□ 0.73
SCAMP4-205ENST00000452128 CFHR5Q9BXR6 569 aa19.64■□□□□ 0.73
SCAMP4-205ENST00000452128 ZNF341Q9BYN7 854 aa19.64■□□□□ 0.73
SCAMP4-205ENST00000452128 TSKSQ9UJT2 592 aa19.64■□□□□ 0.73
SCAMP4-205ENST00000452128 MYO5AQ9Y4I1 1855 aaKnown RBP19.63■□□□□ 0.73
SCAMP4-205ENST00000452128 COL2A1P02458 1487 aaPredicted RBP19.63■□□□□ 0.73
SCAMP4-205ENST00000452128 SPDYE5A6NIY4 337 aa19.63■□□□□ 0.73
SCAMP4-205ENST00000452128 TBC1D12O60347 775 aa19.63■□□□□ 0.73
SCAMP4-205ENST00000452128 IDH1O75874 414 aaKnown RBP19.63■□□□□ 0.73
SCAMP4-205ENST00000452128 CYP7A1P22680 504 aa19.63■□□□□ 0.73
SCAMP4-205ENST00000452128 INPP5BP32019 993 aa19.63■□□□□ 0.73
SCAMP4-205ENST00000452128 MKRN3Q13064 507 aaKnown RBP19.63■□□□□ 0.73
SCAMP4-205ENST00000452128 WRNIP1Q96S55 665 aa19.63■□□□□ 0.73
SCAMP4-205ENST00000452128 PTPN18Q99952 460 aa19.63■□□□□ 0.73
SCAMP4-205ENST00000452128 ELP3Q9H9T3 547 aa19.63■□□□□ 0.73
SCAMP4-205ENST00000452128 AATFQ9NY61 560 aaKnown RBP eCLIP19.63■□□□□ 0.735e-6■■□□□ 11.7
SCAMP4-205ENST00000452128 SUPT16HQ9Y5B9 1047 aaKnown RBP19.63■□□□□ 0.73
SCAMP4-205ENST00000452128 TRPA1O75762 1119 aa19.62■□□□□ 0.73
SCAMP4-205ENST00000452128 INHBEP58166 350 aa19.62■□□□□ 0.73
SCAMP4-205ENST00000452128 DYNLL1P63167 89 aaKnown RBP19.62■□□□□ 0.73
SCAMP4-205ENST00000452128 TTF1Q15361 905 aaPredicted RBP19.62■□□□□ 0.73
SCAMP4-205ENST00000452128 NOL9Q5SY16 702 aaKnown RBP19.62■□□□□ 0.73
SCAMP4-205ENST00000452128 METTL16Q86W50 562 aaKnown RBP19.62■□□□□ 0.73
SCAMP4-205ENST00000452128 MAGEB6Q8N7X4 407 aa19.62■□□□□ 0.73
SCAMP4-205ENST00000452128 OPTNQ96CV9 577 aa19.62■□□□□ 0.73
SCAMP4-205ENST00000452128 RIOK1Q9BRS2 568 aaKnown RBP19.62■□□□□ 0.73
SCAMP4-205ENST00000452128 OSBPL5Q9H0X9 879 aaPredicted RBP19.62■□□□□ 0.73
SCAMP4-205ENST00000452128 BOLA2Q9H3K6 86 aa19.62■□□□□ 0.73
SCAMP4-205ENST00000452128 MANSC4A6NHS7 340 aaPredicted RBP19.61■□□□□ 0.73
SCAMP4-205ENST00000452128 GOLIM4O00461 696 aa19.61■□□□□ 0.73
SCAMP4-205ENST00000452128 BAG3O95817 575 aa19.61■□□□□ 0.73
SCAMP4-205ENST00000452128 PDE6AP16499 860 aa19.61■□□□□ 0.73
SCAMP4-205ENST00000452128 PLCG2P16885 1265 aa19.61■□□□□ 0.73
SCAMP4-205ENST00000452128 MAP3K12Q12852 859 aa19.61■□□□□ 0.73
SCAMP4-205ENST00000452128 TEX11Q8IYF3 940 aa19.61■□□□□ 0.73
SCAMP4-205ENST00000452128 EXOC6Q8TAG9 804 aa19.61■□□□□ 0.73
SCAMP4-205ENST00000452128 OTOFQ9HC10 1997 aa19.61■□□□□ 0.73
SCAMP4-205ENST00000452128 SALL3Q9BXA9 1300 aa19.6■□□□□ 0.73
SCAMP4-205ENST00000452128 IGF2BP3O00425 579 aaKnown RBP eCLIP19.6■□□□□ 0.73
SCAMP4-205ENST00000452128 PICALMQ13492 652 aa19.6■□□□□ 0.73
SCAMP4-205ENST00000452128 ERO1BQ86YB8 467 aa19.6■□□□□ 0.73
SCAMP4-205ENST00000452128 IFNL1Q8IU54 200 aa19.6■□□□□ 0.73
SCAMP4-205ENST00000452128 R3HDMLQ9H3Y0 253 aa19.6■□□□□ 0.73
SCAMP4-205ENST00000452128 ECHDC1Q9NTX5 307 aa19.6■□□□□ 0.73
SCAMP4-205ENST00000452128 PAG1Q9NWQ8 432 aa19.6■□□□□ 0.73
SCAMP4-205ENST00000452128 SREBF2Q12772 1141 aa19.59■□□□□ 0.73
SCAMP4-205ENST00000452128 NOM1Q5C9Z4 860 aaKnown RBP19.59■□□□□ 0.73
SCAMP4-205ENST00000452128 OTUD7AQ8TE49 926 aaPredicted RBP19.59■□□□□ 0.73
SCAMP4-205ENST00000452128 TGFBRAP1Q8WUH2 860 aa19.59■□□□□ 0.73
SCAMP4-205ENST00000452128 BRI3BPQ8WY22 251 aa19.59■□□□□ 0.73
SCAMP4-205ENST00000452128 CSADQ9Y600 493 aa19.59■□□□□ 0.73
SCAMP4-205ENST00000452128 DOCK2Q92608 1830 aa19.58■□□□□ 0.73
SCAMP4-205ENST00000452128 LAMB1P07942 1786 aa19.58■□□□□ 0.73
SCAMP4-205ENST00000452128 RRP1BQ14684 758 aaKnown RBP19.58■□□□□ 0.72
SCAMP4-205ENST00000452128 SLFNL1Q499Z3 407 aa19.58■□□□□ 0.72
SCAMP4-205ENST00000452128 SLC9C2Q5TAH2 1124 aa19.58■□□□□ 0.72
SCAMP4-205ENST00000452128 MIGA1Q8NAN2 632 aa19.58■□□□□ 0.72
SCAMP4-205ENST00000452128 DNAJC2Q99543 621 aaKnown RBP19.58■□□□□ 0.72
SCAMP4-205ENST00000452128 MAST2Q6P0Q8 1798 aa19.57■□□□□ 0.72
SCAMP4-205ENST00000452128 FLT1P17948 1338 aa19.57■□□□□ 0.72
SCAMP4-205ENST00000452128 IRF6O14896 467 aa19.57■□□□□ 0.72
SCAMP4-205ENST00000452128 CHGBP05060 677 aa19.57■□□□□ 0.72
SCAMP4-205ENST00000452128 ADD2P35612 726 aa19.57■□□□□ 0.72
SCAMP4-205ENST00000452128 PPATQ06203 517 aa19.57■□□□□ 0.72
SCAMP4-205ENST00000452128 PPIL2Q13356 520 aa19.57■□□□□ 0.72
SCAMP4-205ENST00000452128 MOGSQ13724 837 aa19.57■□□□□ 0.72
SCAMP4-205ENST00000452128 CERS3Q8IU89 383 aa19.57■□□□□ 0.72
SCAMP4-205ENST00000452128 KCNH4Q9UQ05 1017 aa19.57■□□□□ 0.72
SCAMP4-205ENST00000452128 ZNF532Q9HCE3 1301 aa19.56■□□□□ 0.72
SCAMP4-205ENST00000452128 TBC1D8O95759 1140 aa19.56■□□□□ 0.72
SCAMP4-205ENST00000452128 IGHDP01880 384 aa19.56■□□□□ 0.72
SCAMP4-205ENST00000452128 MAPKAPK5Q8IW41 473 aa19.56■□□□□ 0.72
SCAMP4-205ENST00000452128 ZSCAN29Q8IWY8 852 aaPredicted RBP19.56■□□□□ 0.72
SCAMP4-205ENST00000452128 SMC5Q8IY18 1101 aa19.56■□□□□ 0.72
SCAMP4-205ENST00000452128 PI4K2BQ8TCG2 481 aa19.56■□□□□ 0.72
SCAMP4-205ENST00000452128 GCC1Q96CN9 775 aa19.56■□□□□ 0.72
SCAMP4-205ENST00000452128 OTUD5Q96G74 571 aa19.56■□□□□ 0.72
SCAMP4-205ENST00000452128 DHX36Q9H2U1 1008 aaKnown RBP19.56■□□□□ 0.72
SCAMP4-205ENST00000452128 DNAJC18Q9H819 358 aa19.56■□□□□ 0.72
SCAMP4-205ENST00000452128 CTNND1O60716 968 aaKnown RBP19.55■□□□□ 0.72
SCAMP4-205ENST00000452128 GTF2A2P52657 109 aa19.55■□□□□ 0.72
SCAMP4-205ENST00000452128 TSHZ3Q63HK5 1081 aa19.55■□□□□ 0.72
SCAMP4-205ENST00000452128 NOL10Q9BSC4 688 aaKnown RBP19.55■□□□□ 0.72
SCAMP4-205ENST00000452128 BCL11AQ9H165 835 aa19.55■□□□□ 0.72
SCAMP4-205ENST00000452128 PI4KBQ9UBF8 816 aa19.55■□□□□ 0.72
SCAMP4-205ENST00000452128 FAM196BA6NMK8 535 aa19.54■□□□□ 0.72
SCAMP4-205ENST00000452128 ALDH1A1P00352 501 aa19.54■□□□□ 0.72
SCAMP4-205ENST00000452128 PTPRAP18433 802 aa19.54■□□□□ 0.72
SCAMP4-205ENST00000452128 UBE3CQ15386 1083 aa19.54■□□□□ 0.72
SCAMP4-205ENST00000452128 FOXP4Q8IVH2 680 aaPredicted RBP19.54■□□□□ 0.72
SCAMP4-205ENST00000452128 SCYL3Q8IZE3 742 aa19.54■□□□□ 0.72
SCAMP4-205ENST00000452128 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.54■□□□□ 0.72
SCAMP4-205ENST00000452128 STAP2Q9UGK3 403 aa19.54■□□□□ 0.72
SCAMP4-205ENST00000452128 HERC5Q9UII4 1024 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms