RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 DDTLA6NHG4 134 aaPredicted RBP33.46■■■□□ 2.95
USP42-204ENST00000451154 ANKRD23Q86SG2 305 aa33.46■■■□□ 2.95
USP42-204ENST00000451154 PTCH2Q9Y6C5 1203 aa33.46■■■□□ 2.95
USP42-204ENST00000451154 ATRNL1Q5VV63 1379 aa33.46■■■□□ 2.95
USP42-204ENST00000451154 GPR75-ASB3A0A0A6YYF3 556 aa33.45■■■□□ 2.95
USP42-204ENST00000451154 PDHXO00330 501 aa33.45■■■□□ 2.95
USP42-204ENST00000451154 ECM2O94769 699 aaPredicted RBP33.45■■■□□ 2.95
USP42-204ENST00000451154 MOGSQ13724 837 aa33.45■■■□□ 2.95
USP42-204ENST00000451154 LACTBP83111 547 aaPredicted RBP33.44■■■□□ 2.94
USP42-204ENST00000451154 KIF22Q14807 665 aa33.44■■■□□ 2.94
USP42-204ENST00000451154 CPA4Q9UI42 421 aa33.44■■■□□ 2.94
USP42-204ENST00000451154 RFX7Q2KHR2 1363 aa33.44■■■□□ 2.94
USP42-204ENST00000451154 ARID4AP29374 1257 aaPredicted RBP33.43■■■□□ 2.94
USP42-204ENST00000451154 RHBDL3P58872 404 aa33.43■■■□□ 2.94
USP42-204ENST00000451154 C17orf99Q6UX52 265 aa33.43■■■□□ 2.94
USP42-204ENST00000451154 ZSWIM8A7E2V4 1837 aa33.42■■■□□ 2.94
USP42-204ENST00000451154 BRCA2P51587 3418 aa33.42■■■□□ 2.94
USP42-204ENST00000451154 ATP8B2P98198 1209 aa33.42■■■□□ 2.94
USP42-204ENST00000451154 MAP3K10Q02779 954 aa33.42■■■□□ 2.94
USP42-204ENST00000451154 POLA2Q14181 598 aa33.42■■■□□ 2.94
USP42-204ENST00000451154 SCYL3Q8IZE3 742 aa33.42■■■□□ 2.94
USP42-204ENST00000451154 NSUN4Q96CB9 384 aaKnown RBP33.42■■■□□ 2.94
USP42-204ENST00000451154 RAI14Q9P0K7 980 aa33.42■■■□□ 2.94
USP42-204ENST00000451154 ZHX2Q9Y6X8 837 aa33.42■■■□□ 2.94
USP42-204ENST00000451154 DOCK2Q92608 1830 aa33.42■■■□□ 2.94
USP42-204ENST00000451154 CXCL11O14625 94 aa33.41■■■□□ 2.94
USP42-204ENST00000451154 MCAMP43121 646 aa33.41■■■□□ 2.94
USP42-204ENST00000451154 SLC9C1Q4G0N8 1177 aa33.41■■■□□ 2.94
USP42-204ENST00000451154 PRPF38BQ5VTL8 546 aaKnown RBP33.41■■■□□ 2.94
USP42-204ENST00000451154 C1orf115Q9H7X2 142 aa33.41■■■□□ 2.94
USP42-204ENST00000451154 PICK1Q9NRD5 415 aa33.41■■■□□ 2.94
USP42-204ENST00000451154 SLC34A2O95436 690 aa33.4■■■□□ 2.94
USP42-204ENST00000451154 LDHCP07864 332 aa33.4■■■□□ 2.94
USP42-204ENST00000451154 PTPRAP18433 802 aa33.4■■■□□ 2.94
USP42-204ENST00000451154 EN2P19622 333 aaPredicted RBP33.4■■■□□ 2.94
USP42-204ENST00000451154 GSTO1P78417 241 aa33.4■■■□□ 2.94
USP42-204ENST00000451154 ZNF333Q96JL9 665 aa33.4■■■□□ 2.94
USP42-204ENST00000451154 UQCRFS1P1P0C7P4 283 aa33.39■■■□□ 2.94
USP42-204ENST00000451154 DIEXFQ68CQ4 756 aaKnown RBP33.39■■■□□ 2.94
USP42-204ENST00000451154 GPAT2Q6NUI2 795 aa33.39■■■□□ 2.94
USP42-204ENST00000451154 NBPF11Q86T75 865 aa33.39■■■□□ 2.94
USP42-204ENST00000451154 SSH3Q8TE77 659 aa33.39■■■□□ 2.94
USP42-204ENST00000451154 OS9Q13438 667 aaPredicted RBP33.38■■■□□ 2.93
USP42-204ENST00000451154 FTSJ3Q8IY81 847 aaKnown RBP33.38■■■□□ 2.93
USP42-204ENST00000451154 SNRKQ9NRH2 765 aa33.38■■■□□ 2.93
USP42-204ENST00000451154 LRP2BPQ9P2M1 347 aa33.38■■■□□ 2.93
USP42-204ENST00000451154 SURF6O75683 361 aaKnown RBP33.37■■■□□ 2.93
USP42-204ENST00000451154 RLBP1P12271 317 aa33.37■■■□□ 2.93
USP42-204ENST00000451154 CTGFP29279 349 aa33.37■■■□□ 2.93
USP42-204ENST00000451154 TMEM106CQ9BVX2 250 aa33.37■■■□□ 2.93
USP42-204ENST00000451154 AFG3L2Q9Y4W6 797 aa33.37■■■□□ 2.93
USP42-204ENST00000451154 CTNND1O60716 968 aaKnown RBP33.36■■■□□ 2.93
USP42-204ENST00000451154 MYCP01106 439 aaPredicted RBP33.36■■■□□ 2.93
USP42-204ENST00000451154 PSMC4P43686 418 aa33.36■■■□□ 2.93
USP42-204ENST00000451154 TNNI3KQ59H18 835 aa33.36■■■□□ 2.93
USP42-204ENST00000451154 ITPRIPQ8IWB1 547 aa33.36■■■□□ 2.93
USP42-204ENST00000451154 DBNDD2Q9BQY9 259 aa33.36■■■□□ 2.93
USP42-204ENST00000451154 GPR108Q9NPR9 543 aa33.36■■■□□ 2.93
USP42-204ENST00000451154 FPGT-TNNI3KV9GXZ4 949 aa33.36■■■□□ 2.93
USP42-204ENST00000451154 ADGRA2Q96PE1 1338 aa33.35■■■□□ 2.93
USP42-204ENST00000451154 SH3TC2Q8TF17 1288 aa33.35■■■□□ 2.93
USP42-204ENST00000451154 FRMD4AQ9P2Q2 1039 aaPredicted RBP33.35■■■□□ 2.93
USP42-204ENST00000451154 A0A0G2JLL6 359 aaPredicted RBP33.34■■■□□ 2.93
USP42-204ENST00000451154 ZBTB7BO15156 539 aaPredicted RBP33.34■■■□□ 2.93
USP42-204ENST00000451154 NPM3O75607 178 aaKnown RBP33.34■■■□□ 2.93
USP42-204ENST00000451154 GNRH1P01148 92 aa33.34■■■□□ 2.93
USP42-204ENST00000451154 CYP2C8P10632 490 aa33.34■■■□□ 2.93
USP42-204ENST00000451154 TTC39AQ5SRH9 613 aa33.34■■■□□ 2.93
USP42-204ENST00000451154 PRRT2Q7Z6L0 340 aaPredicted RBP33.34■■■□□ 2.93
USP42-204ENST00000451154 FAM196BA6NMK8 535 aa33.33■■■□□ 2.93
USP42-204ENST00000451154 GADL1Q6ZQY3 521 aa33.33■■■□□ 2.93
USP42-204ENST00000451154 FASTKD5Q7L8L6 764 aaKnown RBP33.33■■■□□ 2.93
USP42-204ENST00000451154 TRIM47Q96LD4 638 aa33.33■■■□□ 2.93
USP42-204ENST00000451154 XPO5Q9HAV4 1204 aaKnown RBP eCLIP33.33■■■□□ 2.93
USP42-204ENST00000451154 RBBP6Q7Z6E9 1792 aaKnown RBP33.32■■■□□ 2.92
USP42-204ENST00000451154 TBC1D12O60347 775 aa33.32■■■□□ 2.92
USP42-204ENST00000451154 FMNL1O95466 1100 aaPredicted RBP33.32■■■□□ 2.92
USP42-204ENST00000451154 MAP4K4O95819 1239 aaPredicted RBP33.32■■■□□ 2.92
USP42-204ENST00000451154 SLC4A8Q2Y0W8 1093 aa33.32■■■□□ 2.92
USP42-204ENST00000451154 CCDC158Q5M9N0 1113 aa33.32■■■□□ 2.92
USP42-204ENST00000451154 CCDC84Q86UT8 332 aaPredicted RBP33.32■■■□□ 2.92
USP42-204ENST00000451154 PARK7Q99497 189 aaKnown RBP33.32■■■□□ 2.92
USP42-204ENST00000451154 TEX11Q8IYF3 940 aa33.31■■■□□ 2.92
USP42-204ENST00000451154 TRIM75PA6NK02 468 aa33.3■■■□□ 2.92
USP42-204ENST00000451154 PRMT2P55345 433 aa33.3■■■□□ 2.92
USP42-204ENST00000451154 SH3RF3Q8TEJ3 882 aaPredicted RBP33.3■■■□□ 2.92
USP42-204ENST00000451154 OSBPL5Q9H0X9 879 aaPredicted RBP33.3■■■□□ 2.92
USP42-204ENST00000451154 SRRDQ9UH36 339 aa33.3■■■□□ 2.92
USP42-204ENST00000451154 OSBPP22059 807 aa33.29■■■□□ 2.92
USP42-204ENST00000451154 NAA16Q6N069 864 aaPredicted RBP33.29■■■□□ 2.92
USP42-204ENST00000451154 NOP58Q9Y2X3 529 aaKnown RBP33.29■■■□□ 2.92
USP42-204ENST00000451154 CYP2E1P05181 493 aaPredicted RBP33.28■■■□□ 2.92
USP42-204ENST00000451154 BCRP11274 1271 aa33.28■■■□□ 2.92
USP42-204ENST00000451154 HOXD10P28358 340 aa33.28■■■□□ 2.92
USP42-204ENST00000451154 NOL10Q9BSC4 688 aaKnown RBP33.28■■■□□ 2.92
USP42-204ENST00000451154 DOCK1Q14185 1865 aa33.28■■■□□ 2.92
USP42-204ENST00000451154 PHIPQ8WWQ0 1821 aa33.28■■■□□ 2.92
USP42-204ENST00000451154 CCDC8Q9H0W5 538 aaPredicted RBP33.27■■■□□ 2.92
USP42-204ENST00000451154 AATFQ9NY61 560 aaKnown RBP eCLIP33.27■■■□□ 2.92
USP42-204ENST00000451154 PTPRFP10586 1907 aa33.26■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms