RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 IGDCC4Q8TDY8 1250 aa16.77■□□□□ 0.28
USP39-207ENST00000450066 FBXW7Q969H0 707 aa16.77■□□□□ 0.28
USP39-207ENST00000450066 DBNDD1Q9H9R9 158 aa16.77■□□□□ 0.28
USP39-207ENST00000450066 BAZ2AQ9UIF9 1905 aaKnown RBP16.77■□□□□ 0.28
USP39-207ENST00000450066 PDCP20941 246 aa16.77■□□□□ 0.27
USP39-207ENST00000450066 USP5P45974 858 aa16.77■□□□□ 0.27
USP39-207ENST00000450066 RTKN2Q8IZC4 609 aa16.77■□□□□ 0.27
USP39-207ENST00000450066 BRPF3Q9ULD4 1205 aa16.77■□□□□ 0.27
USP39-207ENST00000450066 ATF5Q9Y2D1 282 aaPredicted RBP16.77■□□□□ 0.27
USP39-207ENST00000450066 CYP2D7A0A087X1C5 515 aa16.76■□□□□ 0.27
USP39-207ENST00000450066 KLF18A0A0U1RQI7 1052 aa16.76■□□□□ 0.27
USP39-207ENST00000450066 LIFRP42702 1097 aa16.76■□□□□ 0.27
USP39-207ENST00000450066 CCDC93Q567U6 631 aa16.76■□□□□ 0.27
USP39-207ENST00000450066 ESR2Q92731 530 aa16.76■□□□□ 0.27
USP39-207ENST00000450066 UPF1Q92900 1129 aaKnown RBP eCLIP16.76■□□□□ 0.27
USP39-207ENST00000450066 TOMM22Q9NS69 142 aa16.76■□□□□ 0.27
USP39-207ENST00000450066 NAP1L2Q9ULW6 460 aaPredicted RBP16.76■□□□□ 0.27
USP39-207ENST00000450066 ECE2O60344 883 aa16.76■□□□□ 0.27
USP39-207ENST00000450066 SLC3A2P08195 630 aaKnown RBP16.76■□□□□ 0.27
USP39-207ENST00000450066 FKBP1AP62942 108 aaKnown RBP16.76■□□□□ 0.27
USP39-207ENST00000450066 SART3Q15020 963 aaKnown RBP16.76■□□□□ 0.27
USP39-207ENST00000450066 R3HDM1Q15032 1099 aaKnown RBP16.76■□□□□ 0.27
USP39-207ENST00000450066 RRP12Q5JTH9 1297 aaKnown RBP16.76■□□□□ 0.27
USP39-207ENST00000450066 STRIP1Q5VSL9 837 aa16.76■□□□□ 0.27
USP39-207ENST00000450066 SGMS1Q86VZ5 419 aa16.76■□□□□ 0.27
USP39-207ENST00000450066 SMARCC2Q8TAQ2 1214 aa16.76■□□□□ 0.27
USP39-207ENST00000450066 MCM9Q9NXL9 1143 aa16.76■□□□□ 0.27
USP39-207ENST00000450066 ZSCAN22P10073 491 aaPredicted RBP16.75■□□□□ 0.27
USP39-207ENST00000450066 CCT2P78371 535 aaKnown RBP16.75■□□□□ 0.27
USP39-207ENST00000450066 TMEM67Q5HYA8 995 aa16.75■□□□□ 0.27
USP39-207ENST00000450066 PSMD1Q99460 953 aa16.75■□□□□ 0.27
USP39-207ENST00000450066 LY9Q9HBG7 655 aa16.75■□□□□ 0.27
USP39-207ENST00000450066 TTF2Q9UNY4 1162 aaKnown RBP16.75■□□□□ 0.27
USP39-207ENST00000450066 HPS5Q9UPZ3 1129 aa16.75■□□□□ 0.27
USP39-207ENST00000450066 LAMB1P07942 1786 aa16.75■□□□□ 0.27
USP39-207ENST00000450066 GOLGA8BA8MQT2 603 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 SMIM22K7EJ46 135 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 IFIT3O14879 490 aaKnown RBP16.74■□□□□ 0.27
USP39-207ENST00000450066 DHX16O60231 1041 aaKnown RBP16.74■□□□□ 0.27
USP39-207ENST00000450066 PTMSP20962 102 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 RHBDL3P58872 404 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 AOC3Q16853 763 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 LARP1BQ659C4 914 aaKnown RBP16.74■□□□□ 0.27
USP39-207ENST00000450066 STK11IPQ8N1F8 1099 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 NSUN7Q8NE18 718 aaKnown RBP16.74■□□□□ 0.27
USP39-207ENST00000450066 DAGLAQ9Y4D2 1042 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 GOLGA6L22H0YM25 854 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 ORC4O43929 436 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 JAK2O60674 1132 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 DTNBO60941 627 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 CTDNEP1O95476 244 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 HMGN5P82970 282 aaKnown RBP16.74■□□□□ 0.27
USP39-207ENST00000450066 C12orf60Q5U649 245 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 FOXD4L5Q5VV16 416 aaPredicted RBP16.74■□□□□ 0.27
USP39-207ENST00000450066 TEX11Q8IYF3 940 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 TGFBRAP1Q8WUH2 860 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 FOXD4L4Q8WXT5 416 aaPredicted RBP16.74■□□□□ 0.27
USP39-207ENST00000450066 NCOA5Q9HCD5 579 aaKnown RBP16.74■□□□□ 0.27
USP39-207ENST00000450066 KCNQ5Q9NR82 932 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 PIM2Q9P1W9 311 aa16.74■□□□□ 0.27
USP39-207ENST00000450066 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.74■□□□□ 0.27
USP39-207ENST00000450066 USP17L8P0C7I0 530 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 NT5C2P49902 561 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 DACT2Q5SW24 774 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 SOGA3Q5TF21 947 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 HHIPL2Q6UWX4 724 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 AMOTL1Q8IY63 956 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 TMTC2Q8N394 836 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 MXD3Q9BW11 206 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 MTMR6Q9Y217 621 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 ERICH2A1L162 156 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 USP17L3A6NCW0 530 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 USP17L4A6NCW7 530 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 F8W031 263 aaPredicted RBP16.73■□□□□ 0.27
USP39-207ENST00000450066 PPIP5K2O43314 1243 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 CYP2D6P10635 497 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 PDE4BQ07343 736 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 APOA5Q6Q788 366 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 USP17L1Q7RTZ2 530 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 UBAC1Q9BSL1 405 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 MRIQ9BWK5 157 aa16.73■□□□□ 0.27
USP39-207ENST00000450066 NFXL1Q6ZNB6 911 aa16.72■□□□□ 0.27
USP39-207ENST00000450066 VPS33BQ9H267 617 aa16.72■□□□□ 0.27
USP39-207ENST00000450066 SENP2Q9HC62 589 aa16.72■□□□□ 0.27
USP39-207ENST00000450066 KIF3AQ9Y496 699 aa16.72■□□□□ 0.27
USP39-207ENST00000450066 ROBO3Q96MS0 1386 aa16.72■□□□□ 0.27
USP39-207ENST00000450066 PTPDC1A2A3K4 754 aa16.71■□□□□ 0.27
USP39-207ENST00000450066 EVX2Q03828 476 aa16.71■□□□□ 0.27
USP39-207ENST00000450066 WTAPQ15007 396 aa16.71■□□□□ 0.27
USP39-207ENST00000450066 MAPKAPK5Q8IW41 473 aa16.71■□□□□ 0.27
USP39-207ENST00000450066 TEKT1Q969V4 418 aa16.71■□□□□ 0.27
USP39-207ENST00000450066 SGIP1Q9BQI5 828 aa16.71■□□□□ 0.27
USP39-207ENST00000450066 SCN9AQ15858 1988 aa16.71■□□□□ 0.27
USP39-207ENST00000450066 CCDC69A6NI79 296 aa16.71■□□□□ 0.27
USP39-207ENST00000450066 ZBTB43O43298 467 aa16.71■□□□□ 0.27
USP39-207ENST00000450066 RANBP6O60518 1105 aaKnown RBP16.71■□□□□ 0.27
USP39-207ENST00000450066 PRDM1O75626 825 aa16.71■□□□□ 0.27
USP39-207ENST00000450066 F13A1P00488 732 aa16.71■□□□□ 0.27
USP39-207ENST00000450066 MCTP1Q6DN14 999 aa16.71■□□□□ 0.27
USP39-207ENST00000450066 FAM184AQ8NB25 1140 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms