RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 ANKRD23Q86SG2 305 aa20.46■□□□□ 0.87
RAB11FIP3-204ENST00000449879 TMEM57Q8N5G2 664 aa20.46■□□□□ 0.87
RAB11FIP3-204ENST00000449879 CPA4Q9UI42 421 aa20.46■□□□□ 0.87
RAB11FIP3-204ENST00000449879 HTTP42858 3142 aa20.46■□□□□ 0.87
RAB11FIP3-204ENST00000449879 DDTLA6NHG4 134 aaPredicted RBP20.45■□□□□ 0.86
RAB11FIP3-204ENST00000449879 PHF20L1A8MW92 1017 aa20.45■□□□□ 0.86
RAB11FIP3-204ENST00000449879 NBPF11Q86T75 865 aa20.45■□□□□ 0.86
RAB11FIP3-204ENST00000449879 SPATA5Q8NB90 893 aa20.45■□□□□ 0.86
RAB11FIP3-204ENST00000449879 TMEM106CQ9BVX2 250 aa20.45■□□□□ 0.86
RAB11FIP3-204ENST00000449879 DDX4Q9NQI0 724 aaKnown RBP20.45■□□□□ 0.86
RAB11FIP3-204ENST00000449879 MROH7-TTC4A0A0A0MT08 1334 aa20.45■□□□□ 0.86
RAB11FIP3-204ENST00000449879 GPR75-ASB3A0A0A6YYF3 556 aa20.44■□□□□ 0.86
RAB11FIP3-204ENST00000449879 SLURP2P0DP57 97 aa20.44■□□□□ 0.86
RAB11FIP3-204ENST00000449879 EN2P19622 333 aaPredicted RBP20.44■□□□□ 0.86
RAB11FIP3-204ENST00000449879 C17orf99Q6UX52 265 aa20.44■□□□□ 0.86
RAB11FIP3-204ENST00000449879 ZNF333Q96JL9 665 aa20.44■□□□□ 0.86
RAB11FIP3-204ENST00000449879 PICK1Q9NRD5 415 aa20.44■□□□□ 0.86
RAB11FIP3-204ENST00000449879 ZHX2Q9Y6X8 837 aa20.44■□□□□ 0.86
RAB11FIP3-204ENST00000449879 CXCL11O14625 94 aa20.43■□□□□ 0.86
RAB11FIP3-204ENST00000449879 MYCP01106 439 aaPredicted RBP20.43■□□□□ 0.86
RAB11FIP3-204ENST00000449879 MOGSQ13724 837 aa20.43■□□□□ 0.86
RAB11FIP3-204ENST00000449879 SCYL3Q8IZE3 742 aa20.43■□□□□ 0.86
RAB11FIP3-204ENST00000449879 ZNF384Q8TF68 577 aa20.43■□□□□ 0.86
RAB11FIP3-204ENST00000449879 RAI14Q9P0K7 980 aa20.43■□□□□ 0.86
RAB11FIP3-204ENST00000449879 ATRNL1Q5VV63 1379 aa20.43■□□□□ 0.86
RAB11FIP3-204ENST00000449879 CENPFP49454 3210 aa20.43■□□□□ 0.86
RAB11FIP3-204ENST00000449879 LDHCP07864 332 aa20.42■□□□□ 0.86
RAB11FIP3-204ENST00000449879 PTPRAP18433 802 aa20.42■□□□□ 0.86
RAB11FIP3-204ENST00000449879 RHBDL3P58872 404 aa20.42■□□□□ 0.86
RAB11FIP3-204ENST00000449879 MAP3K10Q02779 954 aa20.42■□□□□ 0.86
RAB11FIP3-204ENST00000449879 NSUN4Q96CB9 384 aaKnown RBP20.42■□□□□ 0.86
RAB11FIP3-204ENST00000449879 GNRH1P01148 92 aa20.41■□□□□ 0.86
RAB11FIP3-204ENST00000449879 ARID4AP29374 1257 aaPredicted RBP20.41■□□□□ 0.86
RAB11FIP3-204ENST00000449879 PSMC4P43686 418 aa20.41■□□□□ 0.86
RAB11FIP3-204ENST00000449879 GSTO1P78417 241 aa20.41■□□□□ 0.86
RAB11FIP3-204ENST00000449879 OS9Q13438 667 aaPredicted RBP20.41■□□□□ 0.86
RAB11FIP3-204ENST00000449879 SLC4A8Q2Y0W8 1093 aa20.41■□□□□ 0.86
RAB11FIP3-204ENST00000449879 SH3TC2Q8TF17 1288 aa20.41■□□□□ 0.86
RAB11FIP3-204ENST00000449879 LRP2BPQ9P2M1 347 aa20.41■□□□□ 0.86
RAB11FIP3-204ENST00000449879 RFX7Q2KHR2 1363 aa20.41■□□□□ 0.86
RAB11FIP3-204ENST00000449879 ZSWIM8A7E2V4 1837 aa20.4■□□□□ 0.86
RAB11FIP3-204ENST00000449879 CTNND1O60716 968 aaKnown RBP20.4■□□□□ 0.86
RAB11FIP3-204ENST00000449879 UQCRFS1P1P0C7P4 283 aa20.4■□□□□ 0.86
RAB11FIP3-204ENST00000449879 CYP2C8P10632 490 aa20.4■□□□□ 0.86
RAB11FIP3-204ENST00000449879 CTGFP29279 349 aa20.4■□□□□ 0.86
RAB11FIP3-204ENST00000449879 MCAMP43121 646 aa20.4■□□□□ 0.86
RAB11FIP3-204ENST00000449879 ATP8B2P98198 1209 aa20.4■□□□□ 0.86
RAB11FIP3-204ENST00000449879 GPAT2Q6NUI2 795 aa20.4■□□□□ 0.86
RAB11FIP3-204ENST00000449879 SNRKQ9NRH2 765 aa20.4■□□□□ 0.86
RAB11FIP3-204ENST00000449879 AFG3L2Q9Y4W6 797 aa20.4■□□□□ 0.86
RAB11FIP3-204ENST00000449879 DOCK2Q92608 1830 aa20.39■□□□□ 0.86
RAB11FIP3-204ENST00000449879 FMNL1O95466 1100 aaPredicted RBP20.39■□□□□ 0.85
RAB11FIP3-204ENST00000449879 POLA2Q14181 598 aa20.39■□□□□ 0.85
RAB11FIP3-204ENST00000449879 GADL1Q6ZQY3 521 aa20.39■□□□□ 0.85
RAB11FIP3-204ENST00000449879 FASTKD5Q7L8L6 764 aaKnown RBP20.39■□□□□ 0.85
RAB11FIP3-204ENST00000449879 FTSJ3Q8IY81 847 aaKnown RBP20.39■□□□□ 0.85
RAB11FIP3-204ENST00000449879 TRIM47Q96LD4 638 aa20.39■□□□□ 0.85
RAB11FIP3-204ENST00000449879 PARK7Q99497 189 aaKnown RBP20.39■□□□□ 0.85
RAB11FIP3-204ENST00000449879 C1orf115Q9H7X2 142 aa20.39■□□□□ 0.85
RAB11FIP3-204ENST00000449879 ADGRA2Q96PE1 1338 aa20.38■□□□□ 0.85
RAB11FIP3-204ENST00000449879 A0A0G2JLL6 359 aaPredicted RBP20.38■□□□□ 0.85
RAB11FIP3-204ENST00000449879 SURF6O75683 361 aaKnown RBP20.38■□□□□ 0.85
RAB11FIP3-204ENST00000449879 HOXD10P28358 340 aa20.38■□□□□ 0.85
RAB11FIP3-204ENST00000449879 PRMT2P55345 433 aa20.38■□□□□ 0.85
RAB11FIP3-204ENST00000449879 TTC39AQ5SRH9 613 aa20.38■□□□□ 0.85
RAB11FIP3-204ENST00000449879 PRRT2Q7Z6L0 340 aaPredicted RBP20.38■□□□□ 0.85
RAB11FIP3-204ENST00000449879 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.38■□□□□ 0.855e-6■■□□□ 11.5
RAB11FIP3-204ENST00000449879 SRRDQ9UH36 339 aa20.38■□□□□ 0.85
RAB11FIP3-204ENST00000449879 TRIM75PA6NK02 468 aa20.37■□□□□ 0.85
RAB11FIP3-204ENST00000449879 FAM196BA6NMK8 535 aa20.37■□□□□ 0.85
RAB11FIP3-204ENST00000449879 NPM3O75607 178 aaKnown RBP20.37■□□□□ 0.85
RAB11FIP3-204ENST00000449879 TNNI3KQ59H18 835 aa20.37■□□□□ 0.85
RAB11FIP3-204ENST00000449879 CCDC158Q5M9N0 1113 aa20.37■□□□□ 0.85
RAB11FIP3-204ENST00000449879 CCDC84Q86UT8 332 aaPredicted RBP20.37■□□□□ 0.85
RAB11FIP3-204ENST00000449879 ITPRIPQ8IWB1 547 aa20.37■□□□□ 0.85
RAB11FIP3-204ENST00000449879 SSH3Q8TE77 659 aa20.37■□□□□ 0.85
RAB11FIP3-204ENST00000449879 DBNDD2Q9BQY9 259 aa20.37■□□□□ 0.85
RAB11FIP3-204ENST00000449879 GPR108Q9NPR9 543 aa20.37■□□□□ 0.85
RAB11FIP3-204ENST00000449879 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.37■□□□□ 0.85
RAB11FIP3-204ENST00000449879 FPGT-TNNI3KV9GXZ4 949 aa20.37■□□□□ 0.85
RAB11FIP3-204ENST00000449879 TBC1D12O60347 775 aa20.36■□□□□ 0.85
RAB11FIP3-204ENST00000449879 MAP4K4O95819 1239 aaPredicted RBP20.36■□□□□ 0.85
RAB11FIP3-204ENST00000449879 OSBPP22059 807 aa20.36■□□□□ 0.85
RAB11FIP3-204ENST00000449879 TEX11Q8IYF3 940 aa20.36■□□□□ 0.85
RAB11FIP3-204ENST00000449879 NOL10Q9BSC4 688 aaKnown RBP20.36■□□□□ 0.85
RAB11FIP3-204ENST00000449879 BCRP11274 1271 aa20.35■□□□□ 0.85
RAB11FIP3-204ENST00000449879 RLBP1P12271 317 aa20.35■□□□□ 0.85
RAB11FIP3-204ENST00000449879 RAET1EQ8TD07 263 aa20.35■□□□□ 0.85
RAB11FIP3-204ENST00000449879 SH3RF3Q8TEJ3 882 aaPredicted RBP20.35■□□□□ 0.85
RAB11FIP3-204ENST00000449879 OSBPL5Q9H0X9 879 aaPredicted RBP20.35■□□□□ 0.85
RAB11FIP3-204ENST00000449879 RBBP6Q7Z6E9 1792 aaKnown RBP20.35■□□□□ 0.85
RAB11FIP3-204ENST00000449879 MKI67P46013 3256 aaKnown RBP20.35■□□□□ 0.85
RAB11FIP3-204ENST00000449879 ZBTB7BO15156 539 aaPredicted RBP20.34■□□□□ 0.85
RAB11FIP3-204ENST00000449879 NAA16Q6N069 864 aaPredicted RBP20.34■□□□□ 0.85
RAB11FIP3-204ENST00000449879 MYPNQ86TC9 1320 aa20.33■□□□□ 0.85
RAB11FIP3-204ENST00000449879 FCGRTP55899 365 aa20.33■□□□□ 0.85
RAB11FIP3-204ENST00000449879 AATFQ9NY61 560 aaKnown RBP eCLIP20.33■□□□□ 0.85
RAB11FIP3-204ENST00000449879 BAG3O95817 575 aa20.32■□□□□ 0.84
RAB11FIP3-204ENST00000449879 CYP2E1P05181 493 aaPredicted RBP20.32■□□□□ 0.84
RAB11FIP3-204ENST00000449879 GRK4P32298 578 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms