RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 ZNF384Q8TF68 577 aa34.94■■■■□ 3.18
CBX4-202ENST00000448310 FAM163AQ96GL9 167 aaPredicted RBP34.94■■■■□ 3.18
CBX4-202ENST00000448310 CPA4Q9UI42 421 aa34.94■■■■□ 3.18
CBX4-202ENST00000448310 PDHXO00330 501 aa34.93■■■■□ 3.18
CBX4-202ENST00000448310 MOGSQ13724 837 aa34.93■■■■□ 3.18
CBX4-202ENST00000448310 GORABQ5T7V8 394 aa34.93■■■■□ 3.18
CBX4-202ENST00000448310 DDTLA6NHG4 134 aaPredicted RBP34.92■■■■□ 3.18
CBX4-202ENST00000448310 PHF20L1A8MW92 1017 aa34.92■■■■□ 3.18
CBX4-202ENST00000448310 G3BP1Q13283 466 aaKnown RBP eCLIP34.92■■■■□ 3.18
CBX4-202ENST00000448310 KIF22Q14807 665 aa34.92■■■■□ 3.18
CBX4-202ENST00000448310 SLC9C1Q4G0N8 1177 aa34.92■■■■□ 3.18
CBX4-202ENST00000448310 TBC1D9Q6ZT07 1266 aa34.92■■■■□ 3.18
CBX4-202ENST00000448310 ZNF333Q96JL9 665 aa34.92■■■■□ 3.18
CBX4-202ENST00000448310 ZKSCAN2Q63HK3 967 aa34.91■■■■□ 3.18
CBX4-202ENST00000448310 C17orf99Q6UX52 265 aa34.91■■■■□ 3.18
CBX4-202ENST00000448310 SPATA5Q8NB90 893 aa34.91■■■■□ 3.18
CBX4-202ENST00000448310 BRCA2P51587 3418 aa34.91■■■■□ 3.18
CBX4-202ENST00000448310 DOCK1Q14185 1865 aa34.9■■■■□ 3.18
CBX4-202ENST00000448310 EN2P19622 333 aaPredicted RBP34.9■■■■□ 3.18
CBX4-202ENST00000448310 MKI67P46013 3256 aaKnown RBP34.89■■■■□ 3.18
CBX4-202ENST00000448310 GPR75-ASB3A0A0A6YYF3 556 aa34.89■■■■□ 3.18
CBX4-202ENST00000448310 SCYL3Q8IZE3 742 aa34.89■■■■□ 3.18
CBX4-202ENST00000448310 PTPRFP10586 1907 aa34.89■■■■□ 3.18
CBX4-202ENST00000448310 ADGRA2Q96PE1 1338 aa34.88■■■■□ 3.17
CBX4-202ENST00000448310 MYCP01106 439 aaPredicted RBP34.88■■■■□ 3.17
CBX4-202ENST00000448310 ARID4AP29374 1257 aaPredicted RBP34.88■■■■□ 3.17
CBX4-202ENST00000448310 RHBDL3P58872 404 aa34.88■■■■□ 3.17
CBX4-202ENST00000448310 HNRNPUQ00839 825 aaKnown RBP eCLIP34.88■■■■□ 3.17
CBX4-202ENST00000448310 PICK1Q9NRD5 415 aa34.88■■■■□ 3.17
CBX4-202ENST00000448310 ZHX2Q9Y6X8 837 aa34.88■■■■□ 3.17
CBX4-202ENST00000448310 PHIPQ8WWQ0 1821 aa34.88■■■■□ 3.17
CBX4-202ENST00000448310 CTGFP29279 349 aa34.87■■■■□ 3.17
CBX4-202ENST00000448310 CXCL11O14625 94 aa34.86■■■■□ 3.17
CBX4-202ENST00000448310 PTPRAP18433 802 aa34.86■■■■□ 3.17
CBX4-202ENST00000448310 MCAMP43121 646 aa34.86■■■■□ 3.17
CBX4-202ENST00000448310 GPAT2Q6NUI2 795 aa34.86■■■■□ 3.17
CBX4-202ENST00000448310 NBPF11Q86T75 865 aa34.86■■■■□ 3.17
CBX4-202ENST00000448310 SH3TC2Q8TF17 1288 aa34.86■■■■□ 3.17
CBX4-202ENST00000448310 NSUN4Q96CB9 384 aaKnown RBP34.86■■■■□ 3.17
CBX4-202ENST00000448310 TMEM106CQ9BVX2 250 aa34.86■■■■□ 3.17
CBX4-202ENST00000448310 RAI14Q9P0K7 980 aa34.86■■■■□ 3.17
CBX4-202ENST00000448310 MAP3K10Q02779 954 aa34.85■■■■□ 3.17
CBX4-202ENST00000448310 C1orf115Q9H7X2 142 aa34.85■■■■□ 3.17
CBX4-202ENST00000448310 FRMD4AQ9P2Q2 1039 aaPredicted RBP34.85■■■■□ 3.17
CBX4-202ENST00000448310 MIER1Q8N108 512 aa34.84■■■■□ 3.17
CBX4-202ENST00000448310 CYP2C8P10632 490 aa34.83■■■■□ 3.17
CBX4-202ENST00000448310 PSMC4P43686 418 aa34.83■■■■□ 3.17
CBX4-202ENST00000448310 GSTO1P78417 241 aa34.83■■■■□ 3.17
CBX4-202ENST00000448310 POLA2Q14181 598 aa34.83■■■■□ 3.17
CBX4-202ENST00000448310 MGAMO43451 1857 aa34.82■■■■□ 3.17
CBX4-202ENST00000448310 FAM196BA6NMK8 535 aa34.82■■■■□ 3.16
CBX4-202ENST00000448310 LDHCP07864 332 aa34.82■■■■□ 3.16
CBX4-202ENST00000448310 CCDC84Q86UT8 332 aaPredicted RBP34.82■■■■□ 3.16
CBX4-202ENST00000448310 TRIM47Q96LD4 638 aa34.82■■■■□ 3.16
CBX4-202ENST00000448310 PARK7Q99497 189 aaKnown RBP34.82■■■■□ 3.16
CBX4-202ENST00000448310 AFG3L2Q9Y4W6 797 aa34.82■■■■□ 3.16
CBX4-202ENST00000448310 MYO5AQ9Y4I1 1855 aaKnown RBP34.82■■■■□ 3.16
CBX4-202ENST00000448310 A0A0G2JLL6 359 aaPredicted RBP34.81■■■■□ 3.16
CBX4-202ENST00000448310 GNRH1P01148 92 aa34.81■■■■□ 3.16
CBX4-202ENST00000448310 UQCRFS1P1P0C7P4 283 aa34.81■■■■□ 3.16
CBX4-202ENST00000448310 SLC4A8Q2Y0W8 1093 aa34.81■■■■□ 3.16
CBX4-202ENST00000448310 PRRT2Q7Z6L0 340 aaPredicted RBP34.81■■■■□ 3.16
CBX4-202ENST00000448310 SNRKQ9NRH2 765 aa34.81■■■■□ 3.16
CBX4-202ENST00000448310 CTNND1O60716 968 aaKnown RBP34.8■■■■□ 3.16
CBX4-202ENST00000448310 ATP8B2P98198 1209 aa34.8■■■■□ 3.16
CBX4-202ENST00000448310 OS9Q13438 667 aaPredicted RBP34.8■■■■□ 3.16
CBX4-202ENST00000448310 GADL1Q6ZQY3 521 aa34.8■■■■□ 3.16
CBX4-202ENST00000448310 SSH3Q8TE77 659 aa34.8■■■■□ 3.16
CBX4-202ENST00000448310 LRP2BPQ9P2M1 347 aa34.8■■■■□ 3.16
CBX4-202ENST00000448310 ATAD5Q96QE3 1844 aa34.79■■■■□ 3.16
CBX4-202ENST00000448310 FMNL1O95466 1100 aaPredicted RBP34.79■■■■□ 3.16
CBX4-202ENST00000448310 TNNI3KQ59H18 835 aa34.79■■■■□ 3.16
CBX4-202ENST00000448310 FTSJ3Q8IY81 847 aaKnown RBP34.79■■■■□ 3.16
CBX4-202ENST00000448310 DBNDD2Q9BQY9 259 aa34.79■■■■□ 3.16
CBX4-202ENST00000448310 SRRDQ9UH36 339 aa34.79■■■■□ 3.16
CBX4-202ENST00000448310 FPGT-TNNI3KV9GXZ4 949 aa34.79■■■■□ 3.16
CBX4-202ENST00000448310 MAST2Q6P0Q8 1798 aa34.79■■■■□ 3.16
CBX4-202ENST00000448310 OSBPP22059 807 aa34.78■■■■□ 3.16
CBX4-202ENST00000448310 PRMT2P55345 433 aa34.78■■■■□ 3.16
CBX4-202ENST00000448310 FASTKD5Q7L8L6 764 aaKnown RBP34.78■■■■□ 3.16
CBX4-202ENST00000448310 TRIM75PA6NK02 468 aa34.77■■■■□ 3.16
CBX4-202ENST00000448310 NPM3O75607 178 aaKnown RBP34.77■■■■□ 3.16
CBX4-202ENST00000448310 SURF6O75683 361 aaKnown RBP34.77■■■■□ 3.16
CBX4-202ENST00000448310 BCRP11274 1271 aa34.77■■■■□ 3.16
CBX4-202ENST00000448310 RLBP1P12271 317 aa34.77■■■■□ 3.16
CBX4-202ENST00000448310 TTC39AQ5SRH9 613 aa34.77■■■■□ 3.16
CBX4-202ENST00000448310 ITPRIPQ8IWB1 547 aa34.77■■■■□ 3.16
CBX4-202ENST00000448310 XPO5Q9HAV4 1204 aaKnown RBP eCLIP34.77■■■■□ 3.167e-7■□□□□ 11.3
CBX4-202ENST00000448310 GPR108Q9NPR9 543 aa34.77■■■■□ 3.16
CBX4-202ENST00000448310 TEX11Q8IYF3 940 aa34.76■■■■□ 3.16
CBX4-202ENST00000448310 OSBPL5Q9H0X9 879 aaPredicted RBP34.76■■■■□ 3.16
CBX4-202ENST00000448310 CDK5RAP2Q96SN8 1893 aa34.75■■■■□ 3.15
CBX4-202ENST00000448310 TBC1D12O60347 775 aa34.75■■■■□ 3.15
CBX4-202ENST00000448310 SH3RF3Q8TEJ3 882 aaPredicted RBP34.75■■■■□ 3.15
CBX4-202ENST00000448310 COL2A1P02458 1487 aaPredicted RBP34.74■■■■□ 3.15
CBX4-202ENST00000448310 MAP4K4O95819 1239 aaPredicted RBP34.74■■■■□ 3.15
CBX4-202ENST00000448310 MYPNQ86TC9 1320 aa34.74■■■■□ 3.15
CBX4-202ENST00000448310 HOXD10P28358 340 aa34.73■■■■□ 3.15
CBX4-202ENST00000448310 CCDC158Q5M9N0 1113 aa34.73■■■■□ 3.15
CBX4-202ENST00000448310 RAET1EQ8TD07 263 aa34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms