RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PCDHA5Q9Y5H7 936 aa21.95■■□□□ 1.1
SDCBP-204ENST00000447182 MYO5AQ9Y4I1 1855 aaKnown RBP21.95■■□□□ 1.1
SDCBP-204ENST00000447182 NID2Q14112 1375 aa21.94■■□□□ 1.1
SDCBP-204ENST00000447182 ARHGAP6O43182 974 aa21.94■■□□□ 1.1
SDCBP-204ENST00000447182 TAF3Q5VWG9 929 aa21.94■■□□□ 1.1
SDCBP-204ENST00000447182 CREBRFQ8IUR6 639 aa21.94■■□□□ 1.1
SDCBP-204ENST00000447182 TMEM139Q8IV31 216 aa21.94■■□□□ 1.1
SDCBP-204ENST00000447182 KRI1Q8N9T8 703 aaKnown RBP21.94■■□□□ 1.1
SDCBP-204ENST00000447182 TTLL11Q8NHH1 800 aa21.94■■□□□ 1.1
SDCBP-204ENST00000447182 FANCLQ9NW38 375 aa21.94■■□□□ 1.1
SDCBP-204ENST00000447182 ZNF532Q9HCE3 1301 aa21.94■■□□□ 1.1
SDCBP-204ENST00000447182 TCRBV5S4A2TA0A5A2 114 aa21.94■■□□□ 1.1
SDCBP-204ENST00000447182 GOLGA8AA7E2F4 631 aa21.94■■□□□ 1.1
SDCBP-204ENST00000447182 APPP05067 770 aa21.94■■□□□ 1.1
SDCBP-204ENST00000447182 ITGA6P23229 1130 aa21.94■■□□□ 1.1
SDCBP-204ENST00000447182 ARID4AP29374 1257 aaPredicted RBP21.94■■□□□ 1.1
SDCBP-204ENST00000447182 CLCN6P51797 869 aa21.94■■□□□ 1.1
SDCBP-204ENST00000447182 CADPS2Q86UW7 1296 aa21.94■■□□□ 1.1
SDCBP-204ENST00000447182 UTP14AQ9BVJ6 771 aaKnown RBP21.94■■□□□ 1.1
SDCBP-204ENST00000447182 TEX13AQ9BXU3 409 aaPredicted RBP21.94■■□□□ 1.1
SDCBP-204ENST00000447182 HOOK1Q9UJC3 728 aaKnown RBP21.94■■□□□ 1.1
SDCBP-204ENST00000447182 NPHP1O15259 732 aa21.93■■□□□ 1.1
SDCBP-204ENST00000447182 PDE6AP16499 860 aa21.93■■□□□ 1.1
SDCBP-204ENST00000447182 TBX2Q13207 712 aaPredicted RBP21.93■■□□□ 1.1
SDCBP-204ENST00000447182 ARHGAP29Q52LW3 1261 aa21.93■■□□□ 1.1
SDCBP-204ENST00000447182 STRBPQ96SI9 672 aaKnown RBP21.93■■□□□ 1.1
SDCBP-204ENST00000447182 FHOD1Q9Y613 1164 aa21.93■■□□□ 1.1
SDCBP-204ENST00000447182 IDH1O75874 414 aaKnown RBP21.92■■□□□ 1.1
SDCBP-204ENST00000447182 FMNL1O95466 1100 aaPredicted RBP21.92■■□□□ 1.1
SDCBP-204ENST00000447182 IL2RBP14784 551 aa21.92■■□□□ 1.1
SDCBP-204ENST00000447182 BMP6P22004 513 aa21.92■■□□□ 1.1
SDCBP-204ENST00000447182 TMEM67Q5HYA8 995 aa21.92■■□□□ 1.1
SDCBP-204ENST00000447182 NT5DC1Q5TFE4 455 aa21.92■■□□□ 1.1
SDCBP-204ENST00000447182 GIGYF2Q6Y7W6 1299 aaKnown RBP21.92■■□□□ 1.1
SDCBP-204ENST00000447182 NFXL1Q6ZNB6 911 aa21.92■■□□□ 1.1
SDCBP-204ENST00000447182 NOSTRINQ8IVI9 506 aa21.92■■□□□ 1.1
SDCBP-204ENST00000447182 WASF1Q92558 559 aa21.92■■□□□ 1.1
SDCBP-204ENST00000447182 INTS13Q9NVM9 706 aa21.92■■□□□ 1.1
SDCBP-204ENST00000447182 TBC1D2BQ9UPU7 963 aa21.92■■□□□ 1.1
SDCBP-204ENST00000447182 COL5A2P05997 1499 aaPredicted RBP21.92■■□□□ 1.1
SDCBP-204ENST00000447182 MYH3P11055 1940 aa21.92■■□□□ 1.1
SDCBP-204ENST00000447182 ANKRD18BA2A2Z9 1011 aa21.92■■□□□ 1.1
SDCBP-204ENST00000447182 TMEM232C9JQI7 657 aa21.92■■□□□ 1.1
SDCBP-204ENST00000447182 SSRP1Q08945 709 aaKnown RBP21.92■■□□□ 1.1
SDCBP-204ENST00000447182 GREM2Q9H772 168 aa21.92■■□□□ 1.1
SDCBP-204ENST00000447182 GOLGA6L9A6NEM1 432 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 FANCGO15287 622 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 IFNAR1P17181 557 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 CTSWP56202 376 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 UBXN4Q92575 508 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 MPHOSPH8Q99549 860 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 CNNM1Q9NRU3 951 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 EFCAB8A8MWE9 144 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 TADA3O75528 432 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 PDE8BO95263 885 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 UQCRFS1P1P0C7P4 283 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 PDE4BQ07343 736 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 STK11IPQ8N1F8 1099 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 CARD10Q9BWT7 1032 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 ARGLU1Q9NWB6 273 aaPredicted RBP21.91■■□□□ 1.1
SDCBP-204ENST00000447182 SLC12A7Q9Y666 1083 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 PARP3Q9Y6F1 533 aa21.91■■□□□ 1.1
SDCBP-204ENST00000447182 CHD4Q14839 1912 aa21.9■■□□□ 1.1
SDCBP-204ENST00000447182 TOGARAM1Q9Y4F4 1720 aa21.9■■□□□ 1.1
SDCBP-204ENST00000447182 STRCP1A6NGW2 1772 aa21.9■■□□□ 1.1
SDCBP-204ENST00000447182 VWA3AA6NCI4 1184 aa21.9■■□□□ 1.1
SDCBP-204ENST00000447182 ZRANB2O95218 330 aaKnown RBP eCLIP21.9■■□□□ 1.1
SDCBP-204ENST00000447182 TPM1P09493 284 aa21.9■■□□□ 1.1
SDCBP-204ENST00000447182 NLRP10Q86W26 655 aa21.9■■□□□ 1.1
SDCBP-204ENST00000447182 AIDAQ96BJ3 306 aa21.9■■□□□ 1.1
SDCBP-204ENST00000447182 NOL10Q9BSC4 688 aaKnown RBP21.9■■□□□ 1.1
SDCBP-204ENST00000447182 PRDM11Q9NQV5 511 aa21.9■■□□□ 1.1
SDCBP-204ENST00000447182 PPP2R2CQ9Y2T4 447 aa21.9■■□□□ 1.1
SDCBP-204ENST00000447182 ZNF330Q9Y3S2 320 aaPredicted RBP21.9■■□□□ 1.1
SDCBP-204ENST00000447182 TIAM2Q8IVF5 1701 aa21.89■■□□□ 1.1
SDCBP-204ENST00000447182 PATL2C9JE40 543 aaKnown RBP21.89■■□□□ 1.1
SDCBP-204ENST00000447182 STX10O60499 249 aa21.89■■□□□ 1.1
SDCBP-204ENST00000447182 MMP1P03956 469 aa21.89■■□□□ 1.1
SDCBP-204ENST00000447182 ZNF18P17022 549 aa21.89■■□□□ 1.1
SDCBP-204ENST00000447182 PTPREP23469 700 aa21.89■■□□□ 1.1
SDCBP-204ENST00000447182 SARSP49591 514 aaKnown RBP21.89■■□□□ 1.1
SDCBP-204ENST00000447182 SYNE4Q8N205 404 aa21.89■■□□□ 1.1
SDCBP-204ENST00000447182 MLKLQ8NB16 471 aa21.89■■□□□ 1.1
SDCBP-204ENST00000447182 SLC26A6Q9BXS9 759 aa21.89■■□□□ 1.1
SDCBP-204ENST00000447182 CNNM2Q9H8M5 875 aa21.89■■□□□ 1.1
SDCBP-204ENST00000447182 MAN1B1Q9UKM7 699 aa21.89■■□□□ 1.1
SDCBP-204ENST00000447182 WWC3Q9ULE0 1092 aa21.89■■□□□ 1.1
SDCBP-204ENST00000447182 POSTNQ15063 836 aa21.89■■□□□ 1.09
SDCBP-204ENST00000447182 MNS1Q8NEH6 495 aa21.89■■□□□ 1.09
SDCBP-204ENST00000447182 ENOX1Q8TC92 643 aaKnown RBP21.89■■□□□ 1.09
SDCBP-204ENST00000447182 ZSWIM5Q9P217 1185 aa21.89■■□□□ 1.09
SDCBP-204ENST00000447182 DACH1Q9UI36 760 aa21.89■■□□□ 1.09
SDCBP-204ENST00000447182 PNMA6AP0CW24 399 aaPredicted RBP21.88■■□□□ 1.09
SDCBP-204ENST00000447182 PHKA1P46020 1223 aa21.88■■□□□ 1.09
SDCBP-204ENST00000447182 TOB1P50616 345 aaPredicted RBP21.88■■□□□ 1.09
SDCBP-204ENST00000447182 SAFBQ15424 915 aaKnown RBP eCLIP21.88■■□□□ 1.09
SDCBP-204ENST00000447182 TRIML1Q8N9V2 468 aa21.88■■□□□ 1.09
SDCBP-204ENST00000447182 ZNF579Q8NAF0 562 aaKnown RBP21.88■■□□□ 1.09
SDCBP-204ENST00000447182 BAG1Q99933 345 aaPredicted RBP21.88■■□□□ 1.09
SDCBP-204ENST00000447182 MYL10Q9BUA6 226 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms