RNA–Protein interactions for RNA: ENST00000444811.6

NELFE-206, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-206ENST00000444811 MAP3K9P80192 1104 aa23.93■■□□□ 1.42
NELFE-206ENST00000444811 MIGA2Q7L4E1 593 aa23.93■■□□□ 1.42
NELFE-206ENST00000444811 MAGEB6Q8N7X4 407 aa23.93■■□□□ 1.42
NELFE-206ENST00000444811 HOOK2Q96ED9 719 aa23.93■■□□□ 1.42
NELFE-206ENST00000444811 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.93■■□□□ 1.42
NELFE-206ENST00000444811 GJA5P36382 358 aa23.92■■□□□ 1.42
NELFE-206ENST00000444811 MAP3K12Q12852 859 aa23.92■■□□□ 1.42
NELFE-206ENST00000444811 VGLL4Q14135 290 aa23.92■■□□□ 1.42
NELFE-206ENST00000444811 TTF1Q15361 905 aaPredicted RBP23.92■■□□□ 1.42
NELFE-206ENST00000444811 DCAF15Q66K64 600 aa23.92■■□□□ 1.42
NELFE-206ENST00000444811 WNK4Q96J92 1243 aa23.92■■□□□ 1.42
NELFE-206ENST00000444811 HAUS7Q99871 368 aa23.92■■□□□ 1.42
NELFE-206ENST00000444811 CDK5RAP2Q96SN8 1893 aa23.92■■□□□ 1.42
NELFE-206ENST00000444811 LAMB1P07942 1786 aa23.91■■□□□ 1.42
NELFE-206ENST00000444811 BAG3O95817 575 aa23.91■■□□□ 1.42
NELFE-206ENST00000444811 DYNLL1P63167 89 aaKnown RBP23.91■■□□□ 1.42
NELFE-206ENST00000444811 TEX11Q8IYF3 940 aa23.91■■□□□ 1.42
NELFE-206ENST00000444811 BEGAINQ9BUH8 593 aa23.91■■□□□ 1.42
NELFE-206ENST00000444811 ZNF341Q9BYN7 854 aa23.91■■□□□ 1.42
NELFE-206ENST00000444811 ELP3Q9H9T3 547 aa23.91■■□□□ 1.42
NELFE-206ENST00000444811 COL2A1P02458 1487 aaPredicted RBP23.9■■□□□ 1.42
NELFE-206ENST00000444811 WRNIP1Q96S55 665 aa23.9■■□□□ 1.42
NELFE-206ENST00000444811 NOL10Q9BSC4 688 aaKnown RBP23.9■■□□□ 1.42
NELFE-206ENST00000444811 OSBPL5Q9H0X9 879 aaPredicted RBP23.9■■□□□ 1.42
NELFE-206ENST00000444811 ECHDC1Q9NTX5 307 aa23.9■■□□□ 1.42
NELFE-206ENST00000444811 PAG1Q9NWQ8 432 aa23.9■■□□□ 1.42
NELFE-206ENST00000444811 TSKSQ9UJT2 592 aa23.9■■□□□ 1.42
NELFE-206ENST00000444811 ZNF112Q9UJU3 913 aa23.9■■□□□ 1.42
NELFE-206ENST00000444811 SNCAIPQ9Y6H5 919 aa23.9■■□□□ 1.42
NELFE-206ENST00000444811 FOCADQ5VW36 1801 aa23.89■■□□□ 1.42
NELFE-206ENST00000444811 SLURP2P0DP57 97 aa23.89■■□□□ 1.41
NELFE-206ENST00000444811 ZBTB48P10074 688 aaPredicted RBP23.89■■□□□ 1.41
NELFE-206ENST00000444811 PLCG2P16885 1265 aa23.89■■□□□ 1.41
NELFE-206ENST00000444811 MAP3K10Q02779 954 aa23.89■■□□□ 1.41
NELFE-206ENST00000444811 TMED8Q6PL24 325 aaPredicted RBP23.89■■□□□ 1.41
NELFE-206ENST00000444811 REM2Q8IYK8 340 aaPredicted RBP23.89■■□□□ 1.41
NELFE-206ENST00000444811 MIGA1Q8NAN2 632 aa23.89■■□□□ 1.41
NELFE-206ENST00000444811 CNKSR2Q8WXI2 1034 aa23.89■■□□□ 1.41
NELFE-206ENST00000444811 CA12O43570 354 aa23.88■■□□□ 1.41
NELFE-206ENST00000444811 PDE6AP16499 860 aa23.88■■□□□ 1.41
NELFE-206ENST00000444811 INPP5BP32019 993 aa23.88■■□□□ 1.41
NELFE-206ENST00000444811 TM4SF4P48230 202 aa23.88■■□□□ 1.41
NELFE-206ENST00000444811 TSHZ3Q63HK5 1081 aa23.88■■□□□ 1.41
NELFE-206ENST00000444811 ZSCAN29Q8IWY8 852 aaPredicted RBP23.88■■□□□ 1.41
NELFE-206ENST00000444811 OTUD7AQ8TE49 926 aaPredicted RBP23.88■■□□□ 1.41
NELFE-206ENST00000444811 ZKSCAN4Q969J2 545 aaPredicted RBP23.88■■□□□ 1.41
NELFE-206ENST00000444811 OPTNQ96CV9 577 aa23.88■■□□□ 1.41
NELFE-206ENST00000444811 RNF186Q9NXI6 227 aa23.88■■□□□ 1.41
NELFE-206ENST00000444811 TCRBV5S4A2TA0A5A2 114 aa23.87■■□□□ 1.41
NELFE-206ENST00000444811 TGFBRAP1Q8WUH2 860 aa23.87■■□□□ 1.41
NELFE-206ENST00000444811 GCC1Q96CN9 775 aa23.87■■□□□ 1.41
NELFE-206ENST00000444811 CSADQ9Y600 493 aa23.87■■□□□ 1.41
NELFE-206ENST00000444811 SLC9C2Q5TAH2 1124 aa23.86■■□□□ 1.41
NELFE-206ENST00000444811 SAGE1Q9NXZ1 904 aa23.86■■□□□ 1.41
NELFE-206ENST00000444811 FLT1P17948 1338 aa23.85■■□□□ 1.41
NELFE-206ENST00000444811 SALL3Q9BXA9 1300 aa23.85■■□□□ 1.41
NELFE-206ENST00000444811 ZNF532Q9HCE3 1301 aa23.85■■□□□ 1.41
NELFE-206ENST00000444811 SIPA1L1O43166 1804 aa23.85■■□□□ 1.41
NELFE-206ENST00000444811 MANSC4A6NHS7 340 aaPredicted RBP23.85■■□□□ 1.41
NELFE-206ENST00000444811 PHF20L1A8MW92 1017 aa23.85■■□□□ 1.41
NELFE-206ENST00000444811 IGHDP01880 384 aa23.85■■□□□ 1.41
NELFE-206ENST00000444811 IRX6P78412 446 aaPredicted RBP23.85■■□□□ 1.41
NELFE-206ENST00000444811 ANKRD45Q5TZF3 282 aa23.85■■□□□ 1.41
NELFE-206ENST00000444811 MAPKAPK5Q8IW41 473 aa23.85■■□□□ 1.41
NELFE-206ENST00000444811 RIOK1Q9BRS2 568 aaKnown RBP23.85■■□□□ 1.41
NELFE-206ENST00000444811 SPDYE5A6NIY4 337 aa23.84■■□□□ 1.41
NELFE-206ENST00000444811 TRPA1O75762 1119 aa23.84■■□□□ 1.41
NELFE-206ENST00000444811 CHGBP05060 677 aa23.84■■□□□ 1.41
NELFE-206ENST00000444811 ADD2P35612 726 aa23.84■■□□□ 1.41
NELFE-206ENST00000444811 SREBF2Q12772 1141 aa23.84■■□□□ 1.41
NELFE-206ENST00000444811 SLFNL1Q499Z3 407 aa23.84■■□□□ 1.41
NELFE-206ENST00000444811 NOL9Q5SY16 702 aaKnown RBP23.84■■□□□ 1.41
NELFE-206ENST00000444811 GPATCH3Q96I76 525 aa23.84■■□□□ 1.41
NELFE-206ENST00000444811 CASP8AP2Q9UKL3 1982 aa23.83■■□□□ 1.41
NELFE-206ENST00000444811 CERS3Q8IU89 383 aa23.83■■□□□ 1.41
NELFE-206ENST00000444811 SMC5Q8IY18 1101 aa23.83■■□□□ 1.41
NELFE-206ENST00000444811 TTC41PQ6P2S7 1318 aa23.83■■□□□ 1.4
NELFE-206ENST00000444811 MYH7P12883 1935 aa23.82■■□□□ 1.4
NELFE-206ENST00000444811 TBC1D12O60347 775 aa23.82■■□□□ 1.4
NELFE-206ENST00000444811 ERO1BQ86YB8 467 aa23.82■■□□□ 1.4
NELFE-206ENST00000444811 PI4K2BQ8TCG2 481 aa23.82■■□□□ 1.4
NELFE-206ENST00000444811 OTUD5Q96G74 571 aa23.82■■□□□ 1.4
NELFE-206ENST00000444811 MS4A4AQ96JQ5 239 aa23.82■■□□□ 1.4
NELFE-206ENST00000444811 RWDD1Q9H446 243 aaPredicted RBP23.82■■□□□ 1.4
NELFE-206ENST00000444811 TESPA1A2RU30 521 aaPredicted RBP23.81■■□□□ 1.4
NELFE-206ENST00000444811 FAM196BA6NMK8 535 aa23.81■■□□□ 1.4
NELFE-206ENST00000444811 MAGEB6P1A0A0J9YX57 407 aa23.8■■□□□ 1.4
NELFE-206ENST00000444811 IGF2BP3O00425 579 aaKnown RBP eCLIP23.8■■□□□ 1.4
NELFE-206ENST00000444811 INHBEP58166 350 aa23.8■■□□□ 1.4
NELFE-206ENST00000444811 IFNL1Q8IU54 200 aa23.8■■□□□ 1.4
NELFE-206ENST00000444811 DHX36Q9H2U1 1008 aaKnown RBP23.8■■□□□ 1.4
NELFE-206ENST00000444811 PALD1Q9ULE6 856 aa23.8■■□□□ 1.4
NELFE-206ENST00000444811 DDX60LQ5H9U9 1706 aaKnown RBP23.79■■□□□ 1.4
NELFE-206ENST00000444811 MX1P20591 662 aa23.79■■□□□ 1.4
NELFE-206ENST00000444811 PPIL2Q13356 520 aa23.79■■□□□ 1.4
NELFE-206ENST00000444811 UBE3CQ15386 1083 aa23.79■■□□□ 1.4
NELFE-206ENST00000444811 LCORLQ8N3X6 602 aa23.79■■□□□ 1.4
NELFE-206ENST00000444811 KBTBD3Q8NAB2 608 aa23.79■■□□□ 1.4
NELFE-206ENST00000444811 PTPN18Q99952 460 aa23.79■■□□□ 1.4
NELFE-206ENST00000444811 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.79■■□□□ 1.47e-9■■■■□ 20.6
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms