RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 TTLL11Q8NHH1 800 aa8.05□□□□□ -1.12
HDAC6-210ENST00000441703 SENP6Q9GZR1 1112 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-210ENST00000441703 TSPYL2Q9H2G4 693 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-210ENST00000441703 PRDM5Q9NQX1 630 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-210ENST00000441703 PRUNE2Q8WUY3 3088 aa8.04□□□□□ -1.12
HDAC6-210ENST00000441703 PRKAR2AP13861 404 aaKnown RBP8.04□□□□□ -1.12
HDAC6-210ENST00000441703 MRE11P49959 708 aa8.04□□□□□ -1.12
HDAC6-210ENST00000441703 ATN1P54259 1190 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-210ENST00000441703 CACNB3P54284 484 aa8.04□□□□□ -1.12
HDAC6-210ENST00000441703 MOGSQ13724 837 aa8.04□□□□□ -1.12
HDAC6-210ENST00000441703 L1TD1Q5T7N2 865 aaKnown RBP8.04□□□□□ -1.12
HDAC6-210ENST00000441703 RNPC3Q96LT9 517 aaKnown RBP8.04□□□□□ -1.12
HDAC6-210ENST00000441703 ZMYND15Q9H091 742 aa8.04□□□□□ -1.12
HDAC6-210ENST00000441703 SLC45A1Q9Y2W3 748 aa8.04□□□□□ -1.12
HDAC6-210ENST00000441703 MAST2Q6P0Q8 1798 aa8.03□□□□□ -1.12
HDAC6-210ENST00000441703 TAF5LO75529 589 aa8.03□□□□□ -1.12
HDAC6-210ENST00000441703 CYP2B6P20813 491 aa8.03□□□□□ -1.12
HDAC6-210ENST00000441703 ITGA6P23229 1130 aa8.03□□□□□ -1.12
HDAC6-210ENST00000441703 TMPOP42166 694 aaKnown RBP8.03□□□□□ -1.12
HDAC6-210ENST00000441703 RRP1P56182 461 aaKnown RBP8.03□□□□□ -1.12
HDAC6-210ENST00000441703 RTP1P59025 263 aa8.03□□□□□ -1.12
HDAC6-210ENST00000441703 FAM110CQ1W6H9 321 aa8.03□□□□□ -1.12
HDAC6-210ENST00000441703 C15orf52Q6ZUT6 534 aaKnown RBP8.03□□□□□ -1.12
HDAC6-210ENST00000441703 FAM83AQ86UY5 434 aa8.03□□□□□ -1.12
HDAC6-210ENST00000441703 NECAB3Q96P71 396 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-210ENST00000441703 PNMA3Q9UL41 463 aa8.03□□□□□ -1.12
HDAC6-210ENST00000441703 ATP11BQ9Y2G3 1177 aa8.03□□□□□ -1.12
HDAC6-210ENST00000441703 DOCK3Q8IZD9 2030 aa8.03□□□□□ -1.12
HDAC6-210ENST00000441703 RPAP1Q9BWH6 1393 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-210ENST00000441703 LTBP2Q14767 1821 aa8.02□□□□□ -1.13
HDAC6-210ENST00000441703 A0A0G2JLL6 359 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-210ENST00000441703 SNAP23O00161 211 aa8.02□□□□□ -1.13
HDAC6-210ENST00000441703 DDX58O95786 925 aaKnown RBP8.02□□□□□ -1.13
HDAC6-210ENST00000441703 ZKSCAN1P17029 563 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-210ENST00000441703 DNAJB2P25686 324 aa8.02□□□□□ -1.13
HDAC6-210ENST00000441703 CCDC85BQ15834 202 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-210ENST00000441703 NOL9Q5SY16 702 aaKnown RBP8.02□□□□□ -1.13
HDAC6-210ENST00000441703 AKNAD1Q5T1N1 836 aa8.02□□□□□ -1.13
HDAC6-210ENST00000441703 DUSP27Q5VZP5 1158 aa8.02□□□□□ -1.13
HDAC6-210ENST00000441703 POTEEQ6S8J3 1075 aa8.02□□□□□ -1.13
HDAC6-210ENST00000441703 PRRT2Q7Z6L0 340 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-210ENST00000441703 TRMT44Q8IYL2 757 aaKnown RBP8.02□□□□□ -1.13
HDAC6-210ENST00000441703 TRIB2Q92519 343 aa8.02□□□□□ -1.13
HDAC6-210ENST00000441703 BADQ92934 168 aa8.02□□□□□ -1.13
HDAC6-210ENST00000441703 TEKT1Q969V4 418 aa8.02□□□□□ -1.13
HDAC6-210ENST00000441703 METTL22Q9BUU2 404 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-210ENST00000441703 ZNF576Q9H609 170 aa8.02□□□□□ -1.13
HDAC6-210ENST00000441703 EPHX3Q9H6B9 360 aa8.02□□□□□ -1.13
HDAC6-210ENST00000441703 PICK1Q9NRD5 415 aa8.02□□□□□ -1.13
HDAC6-210ENST00000441703 IGFBP4P22692 258 aa8.01□□□□□ -1.13
HDAC6-210ENST00000441703 AAK1Q2M2I8 961 aa8.01□□□□□ -1.13
HDAC6-210ENST00000441703 TIFAQ96CG3 184 aa8.01□□□□□ -1.13
HDAC6-210ENST00000441703 PHAXQ9H814 394 aaKnown RBP8.01□□□□□ -1.13
HDAC6-210ENST00000441703 DAXXQ9UER7 740 aaPredicted RBP8.01□□□□□ -1.13
HDAC6-210ENST00000441703 ZHX2Q9Y6X8 837 aa8.01□□□□□ -1.13
HDAC6-210ENST00000441703 AK9Q5TCS8 1911 aa8.01□□□□□ -1.13
HDAC6-210ENST00000441703 TCF20Q9UGU0 1960 aaKnown RBP8.01□□□□□ -1.13
HDAC6-210ENST00000441703 NCOR1O75376 2440 aa8□□□□□ -1.13
HDAC6-210ENST00000441703 HSFX4A0A1B0GTS1 333 aaPredicted RBP8□□□□□ -1.13
HDAC6-210ENST00000441703 HSFX3A0A1B0GWH4 333 aaPredicted RBP8□□□□□ -1.13
HDAC6-210ENST00000441703 ANKRD18BA2A2Z9 1011 aa8□□□□□ -1.13
HDAC6-210ENST00000441703 PLIN1O60240 522 aa8□□□□□ -1.13
HDAC6-210ENST00000441703 GCLCP48506 637 aaPredicted RBP8□□□□□ -1.13
HDAC6-210ENST00000441703 HDLBPQ00341 1268 aaKnown RBP8□□□□□ -1.13
HDAC6-210ENST00000441703 CACNB2Q08289 660 aaPredicted RBP8□□□□□ -1.13
HDAC6-210ENST00000441703 NEXNQ0ZGT2 675 aa8□□□□□ -1.13
HDAC6-210ENST00000441703 MAP3K21Q5TCX8 1036 aa8□□□□□ -1.13
HDAC6-210ENST00000441703 FKBP1CQ5VVH2 108 aa8□□□□□ -1.13
HDAC6-210ENST00000441703 EXOC6Q8TAG9 804 aa8□□□□□ -1.13
HDAC6-210ENST00000441703 SOCS4Q8WXH5 440 aa8□□□□□ -1.13
HDAC6-210ENST00000441703 NUDT12Q9BQG2 462 aa8□□□□□ -1.13
HDAC6-210ENST00000441703 ZNF112Q9UJU3 913 aa8□□□□□ -1.13
HDAC6-210ENST00000441703 AGTPBP1Q9UPW5 1226 aa8□□□□□ -1.13
HDAC6-210ENST00000441703 PIEZO1Q92508 2521 aa8□□□□□ -1.13
HDAC6-210ENST00000441703 CDH23Q9H251 3354 aa7.99□□□□□ -1.13
HDAC6-210ENST00000441703 FAM86C2PA6NEL3 165 aa7.99□□□□□ -1.13
HDAC6-210ENST00000441703 GPR37L1O60883 481 aa7.99□□□□□ -1.13
HDAC6-210ENST00000441703 FRAT2O75474 233 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-210ENST00000441703 IGKV5-2P06315 115 aa7.99□□□□□ -1.13
HDAC6-210ENST00000441703 CCND3P30281 292 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-210ENST00000441703 CHAF1AQ13111 956 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-210ENST00000441703 PABPC4Q13310 644 aaKnown RBP eCLIP7.99□□□□□ -1.13
HDAC6-210ENST00000441703 HSP90AA2PQ14568 343 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-210ENST00000441703 LHX8Q68G74 356 aa7.99□□□□□ -1.13
HDAC6-210ENST00000441703 CCDC129Q6ZRS4 1044 aa7.99□□□□□ -1.13
HDAC6-210ENST00000441703 CCAR1Q8IX12 1150 aaKnown RBP7.99□□□□□ -1.13
HDAC6-210ENST00000441703 SCYL3Q8IZE3 742 aa7.99□□□□□ -1.13
HDAC6-210ENST00000441703 FAM151AQ8WW52 585 aa7.99□□□□□ -1.13
HDAC6-210ENST00000441703 PLA2G12BQ9BX93 195 aa7.99□□□□□ -1.13
HDAC6-210ENST00000441703 PRDM12Q9H4Q4 367 aa7.99□□□□□ -1.13
HDAC6-210ENST00000441703 GJD2Q9UKL4 321 aa7.99□□□□□ -1.13
HDAC6-210ENST00000441703 TRIM35Q9UPQ4 493 aa7.99□□□□□ -1.13
HDAC6-210ENST00000441703 LAMA2P24043 3122 aaKnown RBP7.99□□□□□ -1.13
HDAC6-210ENST00000441703 PTPRFP10586 1907 aa7.99□□□□□ -1.13
HDAC6-210ENST00000441703 MAST3O60307 1309 aa7.99□□□□□ -1.13
HDAC6-210ENST00000441703 TRIM75PA6NK02 468 aa7.98□□□□□ -1.13
HDAC6-210ENST00000441703 HSP90AA1P07900 732 aaKnown RBP7.98□□□□□ -1.13
HDAC6-210ENST00000441703 HIBADHP31937 336 aaKnown RBP7.98□□□□□ -1.13
HDAC6-210ENST00000441703 CLCN1P35523 988 aa7.98□□□□□ -1.13
HDAC6-210ENST00000441703 TCP10Q12799 353 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms