RNA–Protein interactions for RNA: ENST00000439649.7

GFRA1-204, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GFRA1, Length 9,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-204ENST00000439649 KIAA0586Q9BVV6 1533 aa13.65□□□□□ -0.22
GFRA1-204ENST00000439649 MIER3Q7Z3K6 550 aa13.65□□□□□ -0.22
GFRA1-204ENST00000439649 ARMC9Q7Z3E5 817 aa13.65□□□□□ -0.22
GFRA1-204ENST00000439649 BRF1Q92994 677 aa13.65□□□□□ -0.22
GFRA1-204ENST00000439649 RBBP5Q15291 538 aaKnown RBP13.65□□□□□ -0.22
GFRA1-204ENST00000439649 TAF12Q16514 161 aa13.65□□□□□ -0.22
GFRA1-204ENST00000439649 IGSF22Q8N9C0 903 aa13.65□□□□□ -0.22
GFRA1-204ENST00000439649 ZKSCAN3Q9BRR0 538 aa13.65□□□□□ -0.22
GFRA1-204ENST00000439649 PAG1Q9NWQ8 432 aa13.65□□□□□ -0.22
GFRA1-204ENST00000439649 EPS15L1Q9UBC2 864 aa13.65□□□□□ -0.22
GFRA1-204ENST00000439649 ZMYM3Q14202 1370 aa13.65□□□□□ -0.22
GFRA1-204ENST00000439649 IBTKQ9P2D0 1353 aaPredicted RBP13.65□□□□□ -0.22
GFRA1-204ENST00000439649 MUM1Q2TAK8 710 aa13.65□□□□□ -0.22
GFRA1-204ENST00000439649 RSPH3Q86UC2 560 aa13.65□□□□□ -0.22
GFRA1-204ENST00000439649 RNF40O75150 1001 aa13.65□□□□□ -0.23
GFRA1-204ENST00000439649 VSIG1Q86XK7 387 aa13.65□□□□□ -0.23
GFRA1-204ENST00000439649 CABS1Q96KC9 395 aa13.65□□□□□ -0.23
GFRA1-204ENST00000439649 ZNF131P52739 623 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 BRD3Q15059 726 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 SV2BQ7L1I2 683 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 MIS12Q9H081 205 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 GNA14O95837 355 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 YWHAEP62258 255 aaKnown RBP13.64□□□□□ -0.23
GFRA1-204ENST00000439649 IFNKQ9P0W0 207 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 HSPA8P11142 646 aaKnown RBP13.64□□□□□ -0.23
GFRA1-204ENST00000439649 SDSP20132 328 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 PANK2Q9BZ23 570 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.64□□□□□ -0.23
GFRA1-204ENST00000439649 DEUP1Q05D60 604 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 TEKT1Q969V4 418 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 PPANQ9NQ55 473 aaKnown RBP13.64□□□□□ -0.23
GFRA1-204ENST00000439649 TRIM37O94972 964 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 PDE1AP54750 535 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 CCDC124Q96CT7 223 aaKnown RBP13.64□□□□□ -0.23
GFRA1-204ENST00000439649 NYXQ9GZU5 481 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 KLHL14Q9P2G3 628 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 DBN1Q16643 649 aa13.64□□□□□ -0.23
GFRA1-204ENST00000439649 PTCD1O75127 700 aaKnown RBP13.63□□□□□ -0.23
GFRA1-204ENST00000439649 NBPF5PQ86XG9 351 aaPredicted RBP13.63□□□□□ -0.23
GFRA1-204ENST00000439649 CCDC51Q96ER9 411 aa13.63□□□□□ -0.23
GFRA1-204ENST00000439649 ABCA10Q8WWZ4 1543 aa13.63□□□□□ -0.23
GFRA1-204ENST00000439649 PFDN6O15212 129 aa13.63□□□□□ -0.23
GFRA1-204ENST00000439649 Q6ZUG5 572 aa13.63□□□□□ -0.23
GFRA1-204ENST00000439649 MYRIPQ8NFW9 859 aa13.63□□□□□ -0.23
GFRA1-204ENST00000439649 KRT3P12035 628 aa13.63□□□□□ -0.23
GFRA1-204ENST00000439649 MYCBPQ99417 103 aaPredicted RBP13.63□□□□□ -0.23
GFRA1-204ENST00000439649 EIF2AQ9BY44 585 aaKnown RBP13.63□□□□□ -0.23
GFRA1-204ENST00000439649 CCDC8Q9H0W5 538 aaPredicted RBP13.63□□□□□ -0.23
GFRA1-204ENST00000439649 GRM8O00222 908 aa13.63□□□□□ -0.23
GFRA1-204ENST00000439649 DNM1Q05193 864 aaKnown RBP13.63□□□□□ -0.23
GFRA1-204ENST00000439649 DHX32Q7L7V1 743 aaKnown RBP13.63□□□□□ -0.23
GFRA1-204ENST00000439649 C6orf229H3BNL8 230 aa13.63□□□□□ -0.23
GFRA1-204ENST00000439649 TROVE2P10155 538 aaKnown RBP eCLIP13.63□□□□□ -0.23
GFRA1-204ENST00000439649 CCT6AP40227 531 aaKnown RBP13.63□□□□□ -0.23
GFRA1-204ENST00000439649 GTF3C6Q969F1 213 aa13.63□□□□□ -0.23
GFRA1-204ENST00000439649 PPIP5K1Q6PFW1 1433 aa13.63□□□□□ -0.23
GFRA1-204ENST00000439649 ATP2B3Q16720 1220 aa13.63□□□□□ -0.23
GFRA1-204ENST00000439649 HHATQ5VTY9 493 aa13.63□□□□□ -0.23
GFRA1-204ENST00000439649 RUNDC3BQ96NL0 473 aa13.63□□□□□ -0.23
GFRA1-204ENST00000439649 ZMYM4Q5VZL5 1548 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 ZRANB1Q9UGI0 708 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 RNASELQ05823 741 aaKnown RBP13.62□□□□□ -0.23
GFRA1-204ENST00000439649 RAPGEF1Q13905 1077 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 BRDTQ58F21 947 aaPredicted RBP13.62□□□□□ -0.23
GFRA1-204ENST00000439649 TRIM58Q8NG06 486 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 ZNF277Q9NRM2 450 aaPredicted RBP13.62□□□□□ -0.23
GFRA1-204ENST00000439649 TLDC2A0PJX2 215 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 P4HA1P13674 534 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 PLCB4Q15147 1175 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 NSMCE1Q8WV22 266 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 SECISBP2LQ93073 1101 aaKnown RBP13.62□□□□□ -0.23
GFRA1-204ENST00000439649 MARCKSP29966 332 aaPredicted RBP13.62□□□□□ -0.23
GFRA1-204ENST00000439649 GOLGA8CPA6NN73 597 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 TYW1Q9NV66 732 aaKnown RBP13.62□□□□□ -0.23
GFRA1-204ENST00000439649 ORC6Q9Y5N6 252 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 PRIM1P49642 420 aaKnown RBP13.62□□□□□ -0.23
GFRA1-204ENST00000439649 UTP14CQ5TAP6 766 aaKnown RBP13.62□□□□□ -0.23
GFRA1-204ENST00000439649 RUFY3Q7L099 469 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 RHPN1Q8TCX5 695 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 NUTM2BA6NNL0 878 aaPredicted RBP13.62□□□□□ -0.23
GFRA1-204ENST00000439649 NUTM2EB1AL46 878 aaPredicted RBP13.62□□□□□ -0.23
GFRA1-204ENST00000439649 NAA16Q6N069 864 aaPredicted RBP13.62□□□□□ -0.23
GFRA1-204ENST00000439649 MLKLQ8NB16 471 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 GRK7Q8WTQ7 553 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 ANKRD13DQ6ZTN6 518 aa13.62□□□□□ -0.23
GFRA1-204ENST00000439649 CROCCQ5TZA2 2017 aa13.61□□□□□ -0.23
GFRA1-204ENST00000439649 SMIM23A6NLE4 172 aa13.61□□□□□ -0.23
GFRA1-204ENST00000439649 DDX27Q96GQ7 796 aaKnown RBP13.61□□□□□ -0.23
GFRA1-204ENST00000439649 IWS1Q96ST2 819 aa13.61□□□□□ -0.23
GFRA1-204ENST00000439649 HAND2P61296 217 aa13.61□□□□□ -0.23
GFRA1-204ENST00000439649 FNBP1Q96RU3 617 aa13.61□□□□□ -0.23
GFRA1-204ENST00000439649 EIF3CLB5ME19 914 aaKnown RBP13.61□□□□□ -0.23
GFRA1-204ENST00000439649 SLC12A2P55011 1212 aa13.61□□□□□ -0.23
GFRA1-204ENST00000439649 EIF3CQ99613 913 aaKnown RBP13.61□□□□□ -0.23
GFRA1-204ENST00000439649 RBM8AQ9Y5S9 174 aaKnown RBP13.61□□□□□ -0.23
GFRA1-204ENST00000439649 WDR46O15213 610 aaKnown RBP13.61□□□□□ -0.23
GFRA1-204ENST00000439649 APBA1Q02410 837 aa13.61□□□□□ -0.23
GFRA1-204ENST00000439649 SLC4A8Q2Y0W8 1093 aa13.61□□□□□ -0.23
GFRA1-204ENST00000439649 DCAF17Q5H9S7 520 aaPredicted RBP13.61□□□□□ -0.23
GFRA1-204ENST00000439649 MAN1A1P33908 653 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms