RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 ERO1BQ86YB8 467 aa14.16□□□□□ -0.14
IRF1-204ENST00000439555 SHISA4Q96DD7 197 aa14.16□□□□□ -0.14
IRF1-204ENST00000439555 GPR108Q9NPR9 543 aa14.16□□□□□ -0.14
IRF1-204ENST00000439555 GAKO14976 1311 aa14.15□□□□□ -0.14
IRF1-204ENST00000439555 ZBTB7BO15156 539 aaPredicted RBP14.15□□□□□ -0.14
IRF1-204ENST00000439555 ATP8B2P98198 1209 aa14.15□□□□□ -0.14
IRF1-204ENST00000439555 C17orf99Q6UX52 265 aa14.15□□□□□ -0.14
IRF1-204ENST00000439555 FTSJ3Q8IY81 847 aaKnown RBP14.15□□□□□ -0.14
IRF1-204ENST00000439555 SSH3Q8TE77 659 aa14.15□□□□□ -0.14
IRF1-204ENST00000439555 WRNIP1Q96S55 665 aa14.15□□□□□ -0.14
IRF1-204ENST00000439555 IDI2Q9BXS1 227 aa14.15□□□□□ -0.14
IRF1-204ENST00000439555 ZNF341Q9BYN7 854 aa14.15□□□□□ -0.14
IRF1-204ENST00000439555 USP40Q9NVE5 1235 aa14.15□□□□□ -0.14
IRF1-204ENST00000439555 SRRDQ9UH36 339 aa14.15□□□□□ -0.14
IRF1-204ENST00000439555 ZNF112Q9UJU3 913 aa14.15□□□□□ -0.14
IRF1-204ENST00000439555 IGSF3O75054 1194 aa14.14□□□□□ -0.15
IRF1-204ENST00000439555 ENTPD3O75355 529 aa14.14□□□□□ -0.15
IRF1-204ENST00000439555 MAP4K4O95819 1239 aaPredicted RBP14.14□□□□□ -0.15
IRF1-204ENST00000439555 MTFR1Q15390 333 aa14.14□□□□□ -0.15
IRF1-204ENST00000439555 DZIP1Q86YF9 867 aaKnown RBP14.14□□□□□ -0.15
IRF1-204ENST00000439555 NEUROD6Q96NK8 337 aa14.14□□□□□ -0.15
IRF1-204ENST00000439555 ARHGAP39Q9C0H5 1083 aa14.14□□□□□ -0.15
IRF1-204ENST00000439555 FAM198AQ9UFP1 575 aa14.14□□□□□ -0.15
IRF1-204ENST00000439555 SNCAIPQ9Y6H5 919 aa14.14□□□□□ -0.15
IRF1-204ENST00000439555 NPM3O75607 178 aaKnown RBP14.13□□□□□ -0.15
IRF1-204ENST00000439555 MYCP01106 439 aaPredicted RBP14.13□□□□□ -0.15
IRF1-204ENST00000439555 UQCRFS1P1P0C7P4 283 aa14.13□□□□□ -0.15
IRF1-204ENST00000439555 ARID4AP29374 1257 aaPredicted RBP14.13□□□□□ -0.15
IRF1-204ENST00000439555 GRK4P32298 578 aa14.13□□□□□ -0.15
IRF1-204ENST00000439555 PPATQ06203 517 aa14.13□□□□□ -0.15
IRF1-204ENST00000439555 NFIAQ12857 509 aa14.13□□□□□ -0.15
IRF1-204ENST00000439555 PPIL2Q13356 520 aa14.13□□□□□ -0.15
IRF1-204ENST00000439555 GORABQ5T7V8 394 aa14.13□□□□□ -0.15
IRF1-204ENST00000439555 ERICH6Q7L0X2 663 aa14.13□□□□□ -0.15
IRF1-204ENST00000439555 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
IRF1-204ENST00000439555 TRIM47Q96LD4 638 aa14.13□□□□□ -0.15
IRF1-204ENST00000439555 HMG20BQ9P0W2 317 aa14.13□□□□□ -0.15
IRF1-204ENST00000439555 ABCF2Q9UG63 623 aa14.13□□□□□ -0.15
IRF1-204ENST00000439555 NOP58Q9Y2X3 529 aaKnown RBP14.13□□□□□ -0.15
IRF1-204ENST00000439555 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.13□□□□□ -0.15
IRF1-204ENST00000439555 GPR75-ASB3A0A0A6YYF3 556 aa14.12□□□□□ -0.15
IRF1-204ENST00000439555 BTBD19C9JJ37 291 aa14.12□□□□□ -0.15
IRF1-204ENST00000439555 LDHCP07864 332 aa14.12□□□□□ -0.15
IRF1-204ENST00000439555 GSTO1P78417 241 aa14.12□□□□□ -0.15
IRF1-204ENST00000439555 MAP3K10Q02779 954 aa14.12□□□□□ -0.15
IRF1-204ENST00000439555 TCP10Q12799 353 aa14.12□□□□□ -0.15
IRF1-204ENST00000439555 SNAPC2Q13487 334 aa14.12□□□□□ -0.15
IRF1-204ENST00000439555 NOL9Q5SY16 702 aaKnown RBP14.12□□□□□ -0.15
IRF1-204ENST00000439555 MIGA2Q7L4E1 593 aa14.12□□□□□ -0.15
IRF1-204ENST00000439555 SPATA5Q8NB90 893 aa14.12□□□□□ -0.15
IRF1-204ENST00000439555 ZKSCAN4Q969J2 545 aaPredicted RBP14.12□□□□□ -0.15
IRF1-204ENST00000439555 AK9Q5TCS8 1911 aa14.11□□□□□ -0.15
IRF1-204ENST00000439555 ALPK3Q96L96 1907 aa14.11□□□□□ -0.15
IRF1-204ENST00000439555 IRF6O14896 467 aa14.11□□□□□ -0.15
IRF1-204ENST00000439555 MS4A1P11836 297 aa14.11□□□□□ -0.15
IRF1-204ENST00000439555 RLBP1P12271 317 aa14.11□□□□□ -0.15
IRF1-204ENST00000439555 PSMC4P43686 418 aa14.11□□□□□ -0.15
IRF1-204ENST00000439555 UBXN2AP68543 259 aa14.11□□□□□ -0.15
IRF1-204ENST00000439555 MECOMQ03112 1051 aa14.11□□□□□ -0.15
IRF1-204ENST00000439555 ITPRIPQ8IWB1 547 aa14.11□□□□□ -0.15
IRF1-204ENST00000439555 ZNF512BQ96KM6 892 aaPredicted RBP14.11□□□□□ -0.15
IRF1-204ENST00000439555 MROH7-TTC4A0A0A0MT08 1334 aa14.11□□□□□ -0.15
IRF1-204ENST00000439555 SURF6O75683 361 aaKnown RBP14.1□□□□□ -0.15
IRF1-204ENST00000439555 SGPL1O95470 568 aa14.1□□□□□ -0.15
IRF1-204ENST00000439555 CCL5P13501 91 aa14.1□□□□□ -0.15
IRF1-204ENST00000439555 BMP8BP34820 402 aa14.1□□□□□ -0.15
IRF1-204ENST00000439555 RGS3P49796 1198 aa14.1□□□□□ -0.15
IRF1-204ENST00000439555 TNNI3KQ59H18 835 aa14.1□□□□□ -0.15
IRF1-204ENST00000439555 ANKRD23Q86SG2 305 aa14.1□□□□□ -0.15
IRF1-204ENST00000439555 RAET1EQ8TD07 263 aa14.1□□□□□ -0.15
IRF1-204ENST00000439555 RNF208Q9H0X6 261 aa14.1□□□□□ -0.15
IRF1-204ENST00000439555 KCNH4Q9UQ05 1017 aa14.1□□□□□ -0.15
IRF1-204ENST00000439555 FPGT-TNNI3KV9GXZ4 949 aa14.1□□□□□ -0.15
IRF1-204ENST00000439555 LAMA3Q16787 3333 aa14.1□□□□□ -0.15
IRF1-204ENST00000439555 DOCK3Q8IZD9 2030 aa14.1□□□□□ -0.15
IRF1-204ENST00000439555 RFX7Q2KHR2 1363 aa14.09□□□□□ -0.15
IRF1-204ENST00000439555 ATRNL1Q5VV63 1379 aa14.09□□□□□ -0.15
IRF1-204ENST00000439555 OSBPP22059 807 aa14.09□□□□□ -0.15
IRF1-204ENST00000439555 CTGFP29279 349 aa14.09□□□□□ -0.15
IRF1-204ENST00000439555 INPP5BP32019 993 aa14.09□□□□□ -0.15
IRF1-204ENST00000439555 BTDP43251 543 aa14.09□□□□□ -0.15
IRF1-204ENST00000439555 RHBDL3P58872 404 aa14.09□□□□□ -0.15
IRF1-204ENST00000439555 OS9Q13438 667 aaPredicted RBP14.09□□□□□ -0.15
IRF1-204ENST00000439555 CCDC158Q5M9N0 1113 aa14.09□□□□□ -0.15
IRF1-204ENST00000439555 ZFPM1Q8IX07 1006 aa14.09□□□□□ -0.15
IRF1-204ENST00000439555 ZNF384Q8TF68 577 aa14.09□□□□□ -0.15
IRF1-204ENST00000439555 NSUN4Q96CB9 384 aaKnown RBP14.09□□□□□ -0.15
IRF1-204ENST00000439555 PHF20L1A8MW92 1017 aa14.08□□□□□ -0.16
IRF1-204ENST00000439555 CXCL11O14625 94 aa14.08□□□□□ -0.16
IRF1-204ENST00000439555 TBC1D12O60347 775 aa14.08□□□□□ -0.16
IRF1-204ENST00000439555 MCAMP43121 646 aa14.08□□□□□ -0.16
IRF1-204ENST00000439555 SLAIN1Q8ND83 568 aa14.08□□□□□ -0.16
IRF1-204ENST00000439555 U2AF1L4Q8WU68 220 aaKnown RBP14.08□□□□□ -0.16
IRF1-204ENST00000439555 CUL9Q8IWT3 2517 aa14.08□□□□□ -0.16
IRF1-204ENST00000439555 MYPNQ86TC9 1320 aa14.08□□□□□ -0.16
IRF1-204ENST00000439555 ADGRA2Q96PE1 1338 aa14.08□□□□□ -0.16
IRF1-204ENST00000439555 FARP2O94887 1054 aaPredicted RBP14.07□□□□□ -0.16
IRF1-204ENST00000439555 FMNL1O95466 1100 aaPredicted RBP14.07□□□□□ -0.16
IRF1-204ENST00000439555 PI16Q6UXB8 463 aa14.07□□□□□ -0.16
IRF1-204ENST00000439555 TBC1D9Q6ZT07 1266 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms