RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 PTCH2Q9Y6C5 1203 aa12.3□□□□□ -0.44
CCDC66-207ENST00000439445 BTBD19C9JJ37 291 aa12.29□□□□□ -0.44
CCDC66-207ENST00000439445 EYA2O00167 538 aa12.29□□□□□ -0.44
CCDC66-207ENST00000439445 TLR2O60603 784 aa12.29□□□□□ -0.44
CCDC66-207ENST00000439445 MYCP01106 439 aaPredicted RBP12.29□□□□□ -0.44
CCDC66-207ENST00000439445 SLC5A1P13866 664 aa12.29□□□□□ -0.44
CCDC66-207ENST00000439445 FGFR2P21802 821 aa12.29□□□□□ -0.44
CCDC66-207ENST00000439445 ZEB1P37275 1124 aaPredicted RBP12.29□□□□□ -0.44
CCDC66-207ENST00000439445 PPIL2Q13356 520 aa12.29□□□□□ -0.44
CCDC66-207ENST00000439445 SLC4A8Q2Y0W8 1093 aa12.29□□□□□ -0.44
CCDC66-207ENST00000439445 DCAF15Q66K64 600 aa12.29□□□□□ -0.44
CCDC66-207ENST00000439445 WDR66Q8TBY9 1149 aa12.29□□□□□ -0.44
CCDC66-207ENST00000439445 SSH1Q8WYL5 1049 aa12.29□□□□□ -0.44
CCDC66-207ENST00000439445 ZNF521Q96K83 1311 aa12.29□□□□□ -0.44
CCDC66-207ENST00000439445 AK9Q5TCS8 1911 aa12.29□□□□□ -0.44
CCDC66-207ENST00000439445 RBBP6Q7Z6E9 1792 aaKnown RBP12.28□□□□□ -0.44
CCDC66-207ENST00000439445 TCP10Q12799 353 aa12.28□□□□□ -0.44
CCDC66-207ENST00000439445 HABP4Q5JVS0 413 aaKnown RBP12.28□□□□□ -0.44
CCDC66-207ENST00000439445 FAM151AQ8WW52 585 aa12.28□□□□□ -0.44
CCDC66-207ENST00000439445 LPIN2Q92539 896 aa12.28□□□□□ -0.44
CCDC66-207ENST00000439445 ZNF341Q9BYN7 854 aa12.28□□□□□ -0.44
CCDC66-207ENST00000439445 ZCCHC17Q9NP64 241 aaKnown RBP12.28□□□□□ -0.44
CCDC66-207ENST00000439445 KIF16BQ96L93 1317 aa12.28□□□□□ -0.44
CCDC66-207ENST00000439445 E9PSI1 815 aa12.27□□□□□ -0.45
CCDC66-207ENST00000439445 HOXB3P14651 431 aaPredicted RBP12.27□□□□□ -0.45
CCDC66-207ENST00000439445 INPP5BP32019 993 aa12.27□□□□□ -0.45
CCDC66-207ENST00000439445 RFX5P48382 616 aaPredicted RBP12.27□□□□□ -0.45
CCDC66-207ENST00000439445 LACTBP83111 547 aaPredicted RBP12.27□□□□□ -0.45
CCDC66-207ENST00000439445 PPATQ06203 517 aa12.27□□□□□ -0.45
CCDC66-207ENST00000439445 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.27□□□□□ -0.45
CCDC66-207ENST00000439445 SH3TC2Q8TF17 1288 aa12.27□□□□□ -0.45
CCDC66-207ENST00000439445 ARHGAP39Q9C0H5 1083 aa12.27□□□□□ -0.45
CCDC66-207ENST00000439445 SIL1Q9H173 461 aa12.27□□□□□ -0.45
CCDC66-207ENST00000439445 DIXDC1Q155Q3 683 aa12.26□□□□□ -0.45
CCDC66-207ENST00000439445 CDC42EP5Q6NZY7 148 aa12.26□□□□□ -0.45
CCDC66-207ENST00000439445 ATG9AQ7Z3C6 839 aa12.26□□□□□ -0.45
CCDC66-207ENST00000439445 GNL3LQ9NVN8 582 aaKnown RBP12.26□□□□□ -0.45
CCDC66-207ENST00000439445 CEP126Q9P2H0 1117 aa12.26□□□□□ -0.45
CCDC66-207ENST00000439445 DAGLAQ9Y4D2 1042 aa12.26□□□□□ -0.45
CCDC66-207ENST00000439445 MYH13Q9UKX3 1938 aa12.26□□□□□ -0.45
CCDC66-207ENST00000439445 PDHXO00330 501 aa12.25□□□□□ -0.45
CCDC66-207ENST00000439445 GNRH1P01148 92 aa12.25□□□□□ -0.45
CCDC66-207ENST00000439445 LDHBP07195 334 aaKnown RBP12.25□□□□□ -0.45
CCDC66-207ENST00000439445 UBTFL1P0CB47 393 aaPredicted RBP12.25□□□□□ -0.45
CCDC66-207ENST00000439445 PRDX5P30044 214 aa12.25□□□□□ -0.45
CCDC66-207ENST00000439445 SLFN5Q08AF3 891 aa12.25□□□□□ -0.45
CCDC66-207ENST00000439445 ATP2B3Q16720 1220 aa12.25□□□□□ -0.45
CCDC66-207ENST00000439445 ALDH1L2Q3SY69 923 aa12.25□□□□□ -0.45
CCDC66-207ENST00000439445 C17orf99Q6UX52 265 aa12.25□□□□□ -0.45
CCDC66-207ENST00000439445 ZNF710Q8N1W2 664 aa12.25□□□□□ -0.45
CCDC66-207ENST00000439445 MARVELD3Q96A59 401 aa12.25□□□□□ -0.45
CCDC66-207ENST00000439445 SMC4Q9NTJ3 1288 aa12.25□□□□□ -0.45
CCDC66-207ENST00000439445 USP40Q9NVE5 1235 aa12.25□□□□□ -0.45
CCDC66-207ENST00000439445 CPA4Q9UI42 421 aa12.25□□□□□ -0.45
CCDC66-207ENST00000439445 ZNF112Q9UJU3 913 aa12.25□□□□□ -0.45
CCDC66-207ENST00000439445 RPAP1Q9BWH6 1393 aaPredicted RBP12.25□□□□□ -0.45
CCDC66-207ENST00000439445 ZSWIM8A7E2V4 1837 aa12.24□□□□□ -0.45
CCDC66-207ENST00000439445 PPP1R37O75864 691 aa12.24□□□□□ -0.45
CCDC66-207ENST00000439445 FMNL1O95466 1100 aaPredicted RBP12.24□□□□□ -0.45
CCDC66-207ENST00000439445 PSMC4P43686 418 aa12.24□□□□□ -0.45
CCDC66-207ENST00000439445 PRMT2P55345 433 aa12.24□□□□□ -0.45
CCDC66-207ENST00000439445 NFIAQ12857 509 aa12.24□□□□□ -0.45
CCDC66-207ENST00000439445 ANKRD23Q86SG2 305 aa12.24□□□□□ -0.45
CCDC66-207ENST00000439445 CIAO1O76071 339 aa12.23□□□□□ -0.45
CCDC66-207ENST00000439445 HOXD10P28358 340 aa12.23□□□□□ -0.45
CCDC66-207ENST00000439445 CDCA7LQ96GN5 454 aa12.23□□□□□ -0.45
CCDC66-207ENST00000439445 TRIM47Q96LD4 638 aa12.23□□□□□ -0.45
CCDC66-207ENST00000439445 FAM198AQ9UFP1 575 aa12.23□□□□□ -0.45
CCDC66-207ENST00000439445 DENND2AQ9ULE3 1009 aa12.23□□□□□ -0.45
CCDC66-207ENST00000439445 KCNH4Q9UQ05 1017 aa12.23□□□□□ -0.45
CCDC66-207ENST00000439445 TRIOBPQ9H2D6 2365 aa12.23□□□□□ -0.45
CCDC66-207ENST00000439445 RANBP2P49792 3224 aaKnown RBP12.22□□□□□ -0.45
CCDC66-207ENST00000439445 SEMA3EO15041 775 aa12.22□□□□□ -0.45
CCDC66-207ENST00000439445 CTGFP29279 349 aa12.22□□□□□ -0.45
CCDC66-207ENST00000439445 PHKA1P46020 1223 aa12.22□□□□□ -0.45
CCDC66-207ENST00000439445 EMP3P54852 163 aa12.22□□□□□ -0.45
CCDC66-207ENST00000439445 ZFPM1Q8IX07 1006 aa12.22□□□□□ -0.45
CCDC66-207ENST00000439445 RAET1EQ8TD07 263 aa12.22□□□□□ -0.45
CCDC66-207ENST00000439445 RYDENQ9NUL5 291 aaKnown RBP12.22□□□□□ -0.45
CCDC66-207ENST00000439445 SRRDQ9UH36 339 aa12.22□□□□□ -0.45
CCDC66-207ENST00000439445 PA2G4Q9UQ80 394 aaKnown RBP12.22□□□□□ -0.45
CCDC66-207ENST00000439445 HDAC5Q9UQL6 1122 aa12.22□□□□□ -0.45
CCDC66-207ENST00000439445 SALL1Q9NSC2 1324 aa12.21□□□□□ -0.45
CCDC66-207ENST00000439445 CXCL11O14625 94 aa12.21□□□□□ -0.45
CCDC66-207ENST00000439445 OSBPP22059 807 aa12.21□□□□□ -0.45
CCDC66-207ENST00000439445 GRK4P32298 578 aa12.21□□□□□ -0.45
CCDC66-207ENST00000439445 IL15P40933 162 aaPredicted RBP12.21□□□□□ -0.45
CCDC66-207ENST00000439445 RGS3P49796 1198 aa12.21□□□□□ -0.45
CCDC66-207ENST00000439445 MOGSQ13724 837 aa12.21□□□□□ -0.45
CCDC66-207ENST00000439445 MTFR1Q15390 333 aa12.21□□□□□ -0.45
CCDC66-207ENST00000439445 NOL9Q5SY16 702 aaKnown RBP12.21□□□□□ -0.45
CCDC66-207ENST00000439445 ZSCAN29Q8IWY8 852 aaPredicted RBP12.21□□□□□ -0.45
CCDC66-207ENST00000439445 ZGPATQ8N5A5 531 aaKnown RBP12.21□□□□□ -0.45
CCDC66-207ENST00000439445 BIN2Q9UBW5 565 aaPredicted RBP12.21□□□□□ -0.45
CCDC66-207ENST00000439445 NOB1Q9ULX3 412 aaKnown RBP12.21□□□□□ -0.45
CCDC66-207ENST00000439445 LRRFIP2Q9Y608 721 aaKnown RBP12.21□□□□□ -0.45
CCDC66-207ENST00000439445 ZHX2Q9Y6X8 837 aa12.21□□□□□ -0.45
CCDC66-207ENST00000439445 MYPNQ86TC9 1320 aa12.2□□□□□ -0.46
CCDC66-207ENST00000439445 MYH2Q9UKX2 1941 aa12.2□□□□□ -0.46
CCDC66-207ENST00000439445 ENTPD3O75355 529 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms